Os07g0535800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to SRK15 protein (Fragment).
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Os07g0535800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to SRK15 protein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 113.1 | 0.5 | 6.04 | 1.38 | 0.917 | -2.23 | -0.0672 | -1.85 | 0.203 | 16.5 | 9.873 | 267 | -- | -- |
| 114.8 | 0.499 | 6.01 | 1.66 | 0.892 | -2.24 | -0.495 | -- | 0.28 | 16.8 | 5.787 | 325 | -- | -- |
| 113.11 | 0.495 | 6.04 | 1.37 | 0.918 | -2.23 | -- | -1.91 | 0.2 | 16.5 | 10.45 | 266 | -- | -- |
| 115.42 | 0.5 | 6.01 | 1.66 | 0.892 | -2.26 | -- | -- | 0.282 | 16.9 | 9.421 | 334 | -- | -- |
| 124.34 | 0.519 | 6.02 | 1.57 | -- | -1.7 | -- | -0.559 | 0.219 | -- | 4.749 | 1341 | -- | -- |
| 167.59 | 0.607 | 6.07 | 1.19 | 0.264 | -- | -0.92 | -- | -0.0385 | 16 | -- | -- | -- | -- |
| 170.02 | 0.611 | 6.07 | 1.17 | 0.258 | -- | -- | -- | -0.0436 | 16 | -- | -- | -- | -- |
| 122.85 | 0.516 | 6 | 1.73 | -- | -1.45 | -- | -- | 0.274 | -- | 17 | 2618 | -- | -- |
| 180.87 | 0.626 | 6.07 | -- | 0.638 | -1.48 | -- | -- | -0.00253 | 16.6 | 4.074 | 291 | -- | -- |
| 173.66 | 0.616 | 6.07 | 1.16 | -- | -- | -- | -- | -0.0505 | -- | -- | -- | -- | -- |
| 206.38 | 0.672 | 6.1 | -- | 0.236 | -- | -- | -- | -0.174 | 16.1 | -- | -- | -- | -- |
| 186.97 | 0.637 | 6.06 | -- | -- | -0.798 | -- | -- | -0.0311 | -- | 20.9 | 1219 | -- | -- |
| 209.4 | 0.675 | 6.1 | -- | -- | -- | -- | -- | -0.18 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 112.04 | temperature | 20 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 5 | 112.69 | temperature | 20 | 270 | > th | dose dependent | rect. | 5 | 23 |
| 9 | 113.11 | temperature | 10 | 270 | > th | dose dependent | no | NA | NA |
| 19 | 113.39 | temperature | 20 | 270 | > th | dose dependent | rect. | 9 | 23 |
| 36 | 114.50 | temperature | 20 | 270 | > th | dose dependent | rect. | 1 | 23 |
| 44 | 114.92 | temperature | 20 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 101 | 117.15 | temperature | 15 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 105 | 117.24 | temperature | 30 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 123 | 117.58 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 12 |
| 124 | 117.58 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 14 |
| 195 | 118.10 | temperature | 20 | 1440 | > th | dose dependent | sin | 8 | NA |
| 204 | 118.16 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 17 |
| 469 | 118.85 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 7 |
| 485 | 118.88 | temperature | 30 | 1440 | < th | dose dependent | sin | 9 | NA |
| 605 | 119.16 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 17 |
| 626 | 119.22 | temperature | 20 | 1440 | > th | dose dependent | rect. | 5 | 3 |
| 752 | 119.45 | temperature | 15 | 90 | > th | dose dependent | sin | 19 | NA |
| 767 | 119.48 | temperature | 15 | 10 | > th | dose dependent | sin | 18 | NA |
| 855 | 119.65 | temperature | 10 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 942 | 119.75 | temperature | 15 | 1440 | > th | dose dependent | no | NA | NA |