Os07g0534200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0534200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 135.43 | 0.547 | 7.68 | -1.64 | 2.29 | -1.3 | 0.921 | -2.42 | -0.0972 | 20.9 | 26.03 | 290 | -- | -- |
| 143.63 | 0.558 | 7.7 | -1.9 | 2.29 | -1.01 | 1.22 | -- | -0.145 | 20.8 | 27.07 | 337 | -- | -- |
| 137.94 | 0.547 | 7.67 | -1.64 | 2.27 | -1.28 | -- | -2.54 | -0.0834 | 20.9 | 26.23 | 330 | -- | -- |
| 145.69 | 0.562 | 7.72 | -2.1 | 2.28 | -1.19 | -- | -- | -0.2 | 21 | 27.6 | 268 | -- | -- |
| 358.49 | 0.882 | 7.7 | -2.29 | -- | -2.6 | -- | -0.614 | -0.419 | -- | 29.9 | 627 | -- | -- |
| 162.08 | 0.597 | 7.67 | -1.76 | 2.41 | -- | 1.05 | -- | 0.0637 | 20.5 | -- | -- | -- | -- |
| 165.6 | 0.603 | 7.67 | -1.79 | 2.41 | -- | -- | -- | 0.0638 | 20.5 | -- | -- | -- | -- |
| 360.37 | 0.884 | 7.73 | -2.53 | -- | -2.8 | -- | -- | -0.493 | -- | 30.1 | 624 | -- | -- |
| 250.09 | 0.741 | 7.62 | -- | 2.41 | -0.0275 | -- | -- | 0.26 | 20.5 | 37.96 | 6 | -- | -- |
| 490.47 | 1.03 | 7.6 | -1.8 | -- | -- | -- | -- | 0.0411 | -- | -- | -- | -- | -- |
| 250.1 | 0.74 | 7.62 | -- | 2.41 | -- | -- | -- | 0.263 | 20.5 | -- | -- | -- | -- |
| 512.22 | 1.05 | 7.62 | -- | -- | -1.89 | -- | -- | -0.0429 | -- | 31.04 | 603 | -- | -- |
| 575.94 | 1.12 | 7.56 | -- | -- | -- | -- | -- | 0.241 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 126.29 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 22 | 13 |
| 10 | 128.08 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 7 | 22 |
| 15 | 129.15 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 2 | 9 |
| 25 | 130.01 | temperature | 20.0 | 270 | > th | dose dependent | sin | 8 | NA |
| 31 | 130.39 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 5 | 8 |
| 46 | 131.77 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 2 | 20 |
| 48 | 131.90 | temperature | 30.0 | 270 | < th | dose dependent | sin | 6 | NA |
| 49 | 132.02 | atmosphere | 1000.0 | 90 | > th | dose dependent | rect. | 5 | 3 |
| 76 | 133.01 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 7 | 22 |
| 109 | 134.05 | wind | 1.0 | 90 | > th | dose independent | rect. | 5 | 2 |
| 110 | 134.11 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 5 | 2 |
| 113 | 134.19 | radiation | 1.0 | 90 | > th | dose independent | rect. | 4 | 3 |
| 131 | 134.50 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 5 | 4 |
| 150 | 135.09 | wind | 9.0 | 90 | < th | dose independent | rect. | 7 | 22 |
| 151 | 135.11 | wind | 5.0 | 90 | < th | dose independent | rect. | 5 | 2 |
| 155 | 135.23 | humidity | 50.0 | 10 | > th | dose independent | rect. | 7 | 23 |
| 163 | 135.31 | temperature | 25.0 | 270 | < th | dose independent | rect. | 3 | 18 |
| 177 | 135.46 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 5 | 2 |
| 178 | 135.46 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 5 | 2 |
| 179 | 135.46 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 22 | 7 |
| 182 | 135.54 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 5 | 2 |
| 190 | 135.58 | temperature | 10.0 | 90 | > th | dose independent | rect. | 5 | 2 |
| 192 | 135.58 | temperature | 30.0 | 90 | < th | dose independent | rect. | 5 | 2 |
| 193 | 135.58 | humidity | 50.0 | 90 | > th | dose independent | rect. | 5 | 2 |
| 196 | 135.58 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 5 | 2 |
| 197 | 135.58 | radiation | 40.0 | 90 | < th | dose independent | rect. | 5 | 2 |
| 198 | 135.58 | temperature | 10.0 | 90 | > th | dose independent | rect. | 7 | 22 |
| 230 | 136.03 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 7 | 23 |
| 247 | 136.21 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 6 | 1 |
| 269 | 136.39 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 5 | 18 |
| 275 | 136.42 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 14 | 23 |
| 300 | 136.54 | wind | 9.0 | 90 | < th | dose dependent | rect. | 5 | 2 |
| 302 | 136.55 | temperature | 25.0 | 270 | < th | dose dependent | no | NA | NA |
| 314 | 136.64 | temperature | 25.0 | 270 | < th | dose independent | rect. | 3 | 8 |
| 356 | 137.07 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 5 | 2 |
| 362 | 137.13 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 23 | 14 |
| 408 | 137.57 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 424 | 137.68 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 8 | 23 |
| 437 | 137.79 | humidity | 50.0 | 90 | > th | dose independent | rect. | 7 | 22 |
| 485 | 138.15 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 7 | 22 |
| 488 | 138.15 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 7 | 22 |
| 494 | 138.18 | humidity | 90.0 | 90 | < th | dose independent | rect. | 4 | 3 |
| 509 | 138.25 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 5 | 2 |
| 511 | 138.25 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 7 | 22 |
| 530 | 138.42 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 7 | 23 |
| 549 | 138.49 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 552 | 138.52 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 5 | 2 |
| 582 | 138.65 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 6 | 1 |
| 589 | 138.70 | temperature | 20.0 | 90 | > th | dose independent | rect. | 22 | 7 |
| 597 | 138.80 | humidity | 90.0 | 10 | < th | dose independent | rect. | 5 | 3 |
| 600 | 138.82 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 5 | 17 |
| 602 | 138.83 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 7 | 22 |
| 611 | 138.91 | wind | 9.0 | 10 | < th | dose independent | rect. | 7 | 23 |
| 631 | 139.02 | temperature | 25.0 | 90 | < th | dose independent | rect. | 5 | 7 |
| 632 | 139.02 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 21 | 8 |
| 637 | 139.03 | wind | 5.0 | 10 | < th | dose dependent | rect. | 6 | 1 |
| 645 | 139.08 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 21 | 22 |
| 646 | 139.09 | radiation | 1.0 | 90 | < th | dose independent | sin | 10 | NA |
| 652 | 139.12 | radiation | 1.0 | 90 | > th | dose independent | sin | 10 | NA |
| 654 | 139.12 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 16 | 14 |
| 662 | 139.15 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 4 | 3 |
| 691 | 139.24 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 16 | 2 |
| 694 | 139.25 | radiation | 1.0 | 90 | < th | dose dependent | sin | 9 | NA |
| 713 | 139.36 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 16 | 8 |
| 717 | 139.37 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 16 | 4 |
| 765 | 139.57 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 6 | 2 |
| 780 | 139.63 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 22 | 4 |
| 786 | 139.66 | wind | 5.0 | 10 | < th | dose independent | rect. | 6 | 1 |
| 789 | 139.66 | temperature | 10.0 | 10 | > th | dose independent | rect. | 6 | 1 |
| 791 | 139.66 | temperature | 30.0 | 10 | < th | dose independent | rect. | 6 | 1 |
| 792 | 139.66 | humidity | 50.0 | 10 | > th | dose independent | rect. | 6 | 1 |
| 796 | 139.66 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 6 | 1 |
| 797 | 139.66 | radiation | 20.0 | 10 | < th | dose independent | rect. | 6 | 1 |
| 800 | 139.66 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 6 | 1 |
| 801 | 139.66 | temperature | 10.0 | 10 | > th | dose independent | rect. | 7 | 23 |
| 802 | 139.66 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 6 | 1 |
| 848 | 139.83 | radiation | 1.0 | 10 | > th | dose independent | rect. | 6 | 1 |
| 885 | 140.05 | wind | 1.0 | 10 | > th | dose independent | rect. | 6 | 1 |
| 931 | 140.24 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 10 | 3 |
| 967 | 140.41 | wind | 9.0 | 1440 | < th | dose independent | rect. | 6 | 3 |
| 968 | 140.41 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 3 |
| 971 | 140.41 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 6 | 3 |
| 973 | 140.41 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 6 | 3 |
| 974 | 140.41 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 6 | 3 |
| 976 | 140.41 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 9 | 21 |