Os07g0533600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase A1, pepsin family protein.
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Os07g0533600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase A1, pepsin family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 129.37 | 0.534 | 3.11 | -0.256 | 0.139 | 12.7 | -0.127 | -32.7 | 0.00476 | 10.7 | 49.49 | 33 | -- | -- |
| 144.05 | 0.563 | 2.99 | 0.123 | 0.157 | -0.156 | 0.292 | -- | -0.0158 | 14.6 | 46.41 | 12 | -- | -- |
| 129.22 | 0.529 | 3.11 | -0.239 | 0.138 | 12.7 | -- | -32.7 | 0.00019 | 11.2 | 49.34 | 32 | -- | -- |
| 143.53 | 0.558 | 2.99 | 0.0853 | 0.0329 | 0.599 | -- | -- | 0.00927 | 7.41 | 52.14 | 93 | -- | -- |
| 129.17 | 0.529 | 3.17 | -0.398 | -- | 20.8 | -- | -53.7 | 0.0311 | -- | 49 | 31 | -- | -- |
| 144.12 | 0.563 | 2.99 | 0.117 | 0.153 | -- | 0.28 | -- | -0.0152 | 14.6 | -- | -- | -- | -- |
| 144.25 | 0.562 | 2.99 | 0.124 | 0.158 | -- | -- | -- | -0.0141 | 13.3 | -- | -- | -- | -- |
| 143.16 | 0.557 | 2.99 | 0.1 | -- | 0.398 | -- | -- | 0.0123 | -- | 65 | 91 | -- | -- |
| 142.92 | 0.557 | 2.99 | -- | 0.109 | 0.523 | -- | -- | -0.0347 | 12.2 | 53 | 55 | -- | -- |
| 145.78 | 0.564 | 2.99 | 0.118 | -- | -- | -- | -- | -0.0174 | -- | -- | -- | -- | -- |
| 144.65 | 0.563 | 2.99 | -- | 0.156 | -- | -- | -- | -0.0279 | 13.3 | -- | -- | -- | -- |
| 143.41 | 0.558 | 2.99 | -- | -- | 0.405 | -- | -- | 0.0025 | -- | 65 | 91 | -- | -- |
| 146.15 | 0.564 | 3 | -- | -- | -- | -- | -- | -0.0304 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 119.70 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 13 | 1 |
| 4 | 119.70 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 13 | 1 |
| 7 | 120.21 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 14 | 1 |
| 12 | 120.53 | radiation | 10.0 | 10 | < th | dose independent | rect. | 14 | 1 |
| 58 | 125.78 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 13 | 1 |
| 93 | 127.50 | radiation | 10.0 | 10 | > th | dose dependent | rect. | 17 | 14 |
| 97 | 127.96 | radiation | 10.0 | 10 | > th | dose dependent | rect. | 17 | 1 |
| 114 | 128.47 | humidity | 50.0 | 30 | < th | dose dependent | rect. | 16 | 2 |
| 149 | 129.45 | atmosphere | 1015.0 | 1440 | > th | dose independent | rect. | 14 | 1 |
| 155 | 129.45 | atmosphere | 1015.0 | 1440 | > th | dose dependent | rect. | 14 | 1 |
| 164 | 129.62 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 14 | 3 |
| 170 | 129.73 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 14 | 1 |
| 172 | 129.75 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 14 | 5 |
| 173 | 129.80 | humidity | 50.0 | 30 | < th | dose independent | rect. | 16 | 1 |
| 174 | 129.81 | temperature | 30.0 | 30 | > th | dose independent | rect. | 16 | 1 |
| 179 | 129.90 | humidity | 50.0 | 30 | < th | dose dependent | sin | 11 | NA |
| 181 | 129.94 | temperature | 25.0 | 10 | < th | dose independent | rect. | 13 | 1 |
| 191 | 130.02 | radiation | 10.0 | 10 | > th | dose independent | rect. | 16 | 2 |
| 207 | 130.06 | atmosphere | 1005.0 | 30 | < th | dose independent | rect. | 16 | 1 |
| 230 | 130.14 | temperature | 30.0 | 30 | > th | dose dependent | rect. | 16 | 1 |
| 249 | 130.18 | humidity | 50.0 | 30 | < th | dose independent | rect. | 16 | 22 |
| 269 | 130.43 | humidity | 50.0 | 30 | < th | dose dependent | rect. | 13 | 5 |
| 306 | 130.46 | atmosphere | 1010.0 | 270 | > th | dose independent | rect. | 12 | 1 |
| 351 | 130.52 | humidity | 50.0 | 30 | < th | dose dependent | no | NA | NA |
| 528 | 130.91 | humidity | 80.0 | 10 | > th | dose independent | rect. | 14 | 1 |
| 551 | 131.13 | radiation | 20.0 | 90 | > th | dose dependent | rect. | 16 | 1 |
| 566 | 131.16 | atmosphere | 1010.0 | 720 | > th | dose dependent | rect. | 2 | 1 |
| 603 | 131.71 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 13 | 1 |
| 637 | 132.12 | humidity | 50.0 | 30 | < th | dose independent | sin | 10 | NA |
| 642 | 132.23 | humidity | 50.0 | 30 | > th | dose independent | sin | 10 | NA |
| 724 | 132.83 | atmosphere | 1010.0 | 30 | < th | dose dependent | rect. | 16 | 1 |
| 745 | 133.01 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 18 | 2 |
| 757 | 133.14 | wind | 5.0 | 30 | < th | dose independent | rect. | 16 | 1 |
| 762 | 133.16 | humidity | 50.0 | 90 | < th | dose independent | sin | 6 | NA |
| 798 | 133.39 | humidity | 50.0 | 90 | < th | dose independent | rect. | 11 | 6 |
| 823 | 133.48 | humidity | 50.0 | 30 | < th | dose independent | no | NA | NA |
| 971 | 133.48 | humidity | 50.0 | 30 | < th | dose independent | rect. | 13 | 23 |