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Os07g0531800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Non-protein coding transcript, unclassifiable transcript.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.92 (0.0201) R2 : 0.38
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.77 (0.0483) R2dC : 0.347 R2C : 0.337
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.211 (0.0423) R2dN8 : 0.0436 R2N8 : 0.033
σ : 0.379
deviance : 65.64
__
_____
C
peak time of C : 22.7
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
44.74 0.314 7.79 0.709 0.784 -0.164 0.513 4.15 0.473 22.6 21.63 1767 -- --
55.59 0.347 7.91 -0.572 0.793 0.282 0.52 -- 0.0962 22.4 29.85 9648 -- --
45.49 0.314 7.78 0.814 0.783 -0.223 -- 4.78 0.505 22.6 22.59 1950 -- --
55.6 0.347 7.96 -0.647 0.749 0.364 -- -- 0.0169 22.7 31.2 21067 -- --
75.96 0.406 7.83 0.282 -- 0.334 -- 4.26 0.307 -- 23 831 -- --
57.99 0.357 7.93 -0.463 0.778 -- 0.584 -- 0.159 22.6 -- -- -- --
59.38 0.361 7.93 -0.487 0.774 -- -- -- 0.156 22.7 -- -- -- --
80.94 0.419 7.93 -0.649 -- 0.71 -- -- 0.0844 -- 24.56 847 -- --
63.89 0.372 7.94 -- 0.777 0.206 -- -- 0.146 22.6 32 9572 -- --
96.39 0.459 7.91 -0.472 -- -- -- -- 0.161 -- -- -- -- --
65.64 0.379 7.92 -- 0.77 -- -- -- 0.211 22.7 -- -- -- --
91.43 0.445 7.91 -- -- 0.599 -- -- 0.173 -- 24.7 825 -- --
102.27 0.472 7.9 -- -- -- -- -- 0.213 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 39.54 wind 3.0 14400 < th dose dependent rect. 20 2
15 43.91 wind 1.0 43200 > th dose independent rect. 21 1
17 44.09 wind 1.0 14400 < th dose independent rect. 20 5
20 44.30 wind 1.0 14400 < th dose independent rect. 20 2
22 44.35 wind 1.0 14400 > th dose independent rect. 20 5
38 44.80 precipitation 0.1 43200 > th dose independent rect. 10 2
39 44.80 precipitation 0.1 43200 > th dose dependent rect. 10 2
40 44.80 radiation 1.0 4320 < th dose dependent rect. 17 13
41 44.82 radiation 1.0 4320 < th dose dependent rect. 17 8
45 44.83 radiation 1.0 4320 < th dose dependent rect. 17 2
53 44.86 temperature 25.0 1440 > th dose independent rect. 6 5
54 44.88 precipitation 0.1 43200 < th dose independent rect. 10 2
55 44.88 temperature 25.0 1440 < th dose independent rect. 6 5
56 44.88 precipitation 0.1 43200 < th dose dependent rect. 10 2
57 44.89 radiation 1.0 4320 > th dose independent rect. 17 2
74 44.98 temperature 20.0 720 > th dose dependent rect. 19 18
95 45.12 temperature 20.0 720 > th dose dependent rect. 17 20
118 45.21 temperature 20.0 1440 > th dose dependent rect. 6 4
138 45.30 radiation 1.0 4320 < th dose dependent sin 13 NA
190 45.52 atmosphere 995.0 43200 < th dose independent rect. 18 20
195 45.53 wind 1.0 14400 < th dose dependent rect. 14 11
197 45.54 radiation 1.0 4320 < th dose dependent rect. 11 20
205 45.56 atmosphere 995.0 43200 < th dose dependent rect. 16 19
208 45.58 atmosphere 995.0 43200 > th dose independent rect. 18 20
210 45.59 precipitation 0.1 43200 > th dose independent rect. 20 2
223 45.62 precipitation 0.1 43200 < th dose independent rect. 20 2
224 45.62 atmosphere 995.0 43200 > th dose independent rect. 21 17
226 45.62 precipitation 0.1 43200 < th dose dependent rect. 20 2
238 45.65 precipitation 0.1 43200 > th dose dependent rect. 20 2
258 45.68 atmosphere 995.0 43200 < th dose independent rect. 21 17
273 45.70 atmosphere 995.0 43200 < th dose dependent rect. 17 8
274 45.71 atmosphere 995.0 43200 < th dose independent sin 6 NA
278 45.71 temperature 25.0 1440 > th dose independent rect. 17 21
294 45.72 atmosphere 995.0 43200 < th dose dependent rect. 18 5
297 45.73 atmosphere 995.0 43200 > th dose independent sin 7 NA
299 45.73 atmosphere 995.0 43200 < th dose dependent rect. 21 14
314 45.74 atmosphere 995.0 43200 < th dose dependent rect. 21 18
321 45.75 atmosphere 995.0 43200 < th dose independent rect. 18 8
323 45.75 temperature 25.0 1440 > th dose independent rect. 15 21
352 45.78 temperature 25.0 1440 > th dose independent rect. 5 19
354 45.78 atmosphere 995.0 43200 < th dose dependent sin 7 NA
364 45.79 atmosphere 995.0 43200 < th dose independent sin 10 NA
381 45.80 atmosphere 995.0 43200 > th dose independent sin 10 NA
402 45.81 radiation 40.0 43200 < th dose independent rect. 16 15
411 45.82 temperature 25.0 1440 < th dose independent rect. 5 19
416 45.83 atmosphere 995.0 43200 > th dose independent rect. 18 9
418 45.83 atmosphere 995.0 43200 > th dose independent rect. 2 11
428 45.83 atmosphere 995.0 43200 < th dose dependent sin 14 NA
450 45.85 radiation 40.0 14400 > th dose dependent rect. 13 1
452 45.85 atmosphere 1005.0 43200 < th dose dependent rect. 4 3
486 45.87 atmosphere 1005.0 43200 < th dose dependent rect. 5 1
495 45.88 atmosphere 1005.0 43200 < th dose dependent rect. 3 5
496 45.88 precipitation 0.1 43200 > th dose dependent rect. 20 5
505 45.89 temperature 20.0 720 > th dose dependent sin 7 NA
510 45.89 atmosphere 1005.0 43200 < th dose dependent rect. 2 20
520 45.90 atmosphere 1005.0 43200 < th dose dependent rect. 2 18
526 45.91 atmosphere 995.0 43200 > th dose independent rect. 23 1
538 45.91 radiation 1.0 4320 < th dose dependent rect. 5 1
555 45.92 temperature 25.0 1440 > th dose independent sin 5 NA
557 45.92 atmosphere 995.0 43200 < th dose independent rect. 21 4
571 45.92 atmosphere 995.0 43200 < th dose dependent rect. 11 19
578 45.93 atmosphere 995.0 43200 < th dose independent rect. 21 1
595 45.93 atmosphere 995.0 43200 < th dose dependent rect. 21 1
627 45.94 atmosphere 995.0 43200 > th dose independent rect. 21 1
629 45.94 radiation 1.0 4320 < th dose independent rect. 17 2
631 45.94 atmosphere 995.0 43200 > th dose independent rect. 19 3
636 45.94 atmosphere 995.0 43200 > th dose independent rect. 19 5
638 45.94 radiation 1.0 4320 < th dose independent rect. 17 8
639 45.94 radiation 1.0 4320 < th dose independent rect. 17 11
644 45.94 temperature 20.0 1440 > th dose dependent sin 5 NA
649 45.94 atmosphere 1005.0 43200 < th dose dependent rect. 2 7
660 45.94 atmosphere 1005.0 43200 < th dose dependent rect. 14 21
685 45.95 radiation 1.0 4320 > th dose independent rect. 16 15
691 45.95 atmosphere 1005.0 43200 < th dose dependent no NA NA
724 45.96 atmosphere 995.0 43200 < th dose independent rect. 1 12
726 45.96 temperature 25.0 1440 < th dose independent rect. 17 21
727 45.96 atmosphere 1005.0 43200 < th dose dependent sin 20 NA
750 45.97 atmosphere 995.0 43200 > th dose independent rect. 3 8
751 45.97 atmosphere 995.0 43200 < th dose independent rect. 3 8
754 45.97 atmosphere 995.0 43200 < th dose independent rect. 2 10
793 45.98 atmosphere 995.0 43200 > th dose independent rect. 4 6
794 45.98 atmosphere 995.0 43200 < th dose independent rect. 4 6
802 45.98 temperature 25.0 1440 < th dose independent rect. 15 22
808 45.98 atmosphere 995.0 43200 < th dose dependent rect. 1 9
873 46.00 atmosphere 995.0 43200 < th dose dependent rect. 2 7
890 46.01 atmosphere 995.0 43200 < th dose independent rect. 5 3
903 46.01 atmosphere 1005.0 43200 < th dose dependent rect. 11 11
951 46.03 atmosphere 995.0 43200 > th dose independent rect. 5 3
964 46.03 atmosphere 1005.0 43200 < th dose dependent sin 7 NA
967 46.03 atmosphere 995.0 43200 < th dose dependent no NA NA
970 46.03 atmosphere 995.0 43200 < th dose dependent rect. 4 4