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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os07g0529100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.97 (0.0455) R2 : 0.00169
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.084 (0.0957) R2dN8 : 0.00218 R2N8 : 0.00169
σ : 0.856
deviance : 336.47
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
317.98 0.838 3.01 -0.424 0.344 0.592 -1.16 -0.929 -0.149 17.7 2.7 42 -- --
320.99 0.834 3 -0.401 0.288 0.578 -0.741 -- -0.124 17.7 2.7 43 -- --
319.71 0.833 3 -0.416 0.313 0.588 -- -0.626 -0.148 17.7 2.5 39 -- --
321.11 0.835 2.98 -0.401 0.291 0.564 -- -- -0.127 18 2.406 42 -- --
323.8 0.838 2.99 -0.332 -- 0.502 -- -0.539 -0.0689 -- 2.5 39 -- --
332.7 0.855 2.97 -0.21 0.214 -- -0.0426 -- -0.112 2.27 -- -- -- --
332.71 0.854 2.97 -0.209 0.214 -- -- -- -0.111 2.35 -- -- -- --
323.8 0.838 2.98 -0.352 -- 0.402 -- -- -0.124 -- 2.5 42 -- --
325.03 0.84 2.97 -- 0.232 0.467 -- -- -0.0817 18.5 2.484 42 -- --
335.42 0.856 2.97 -0.2 -- -- -- -- -0.106 -- -- -- -- --
333.86 0.855 2.97 -- 0.21 -- -- -- -0.0882 2.33 -- -- -- --
326.83 0.842 2.97 -- -- 0.358 -- -- -0.0849 -- 2.466 39 -- --
336.47 0.856 2.97 -- -- -- -- -- -0.084 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 308.42 wind 3.0 720 < th dose dependent rect. 21 2
2 308.56 wind 3.0 720 < th dose dependent rect. 10 14
4 309.24 wind 1.0 270 < th dose independent rect. 16 1
5 309.24 wind 1.0 270 < th dose dependent rect. 16 1
7 309.32 wind 3.0 270 < th dose dependent rect. 14 9
10 309.93 temperature 25.0 30 > th dose independent rect. 7 1
13 310.59 wind 1.0 1440 < th dose dependent rect. 10 2
14 310.60 wind 5.0 90 > th dose independent rect. 5 2
16 310.61 wind 5.0 90 > th dose dependent rect. 5 2
19 310.65 radiation 20.0 90 > th dose independent rect. 6 1
33 310.65 radiation 20.0 90 > th dose dependent rect. 6 1
47 310.66 wind 3.0 270 < th dose independent rect. 14 8
55 311.06 wind 3.0 720 < th dose dependent rect. 16 8
84 312.63 wind 3.0 270 < th dose independent rect. 15 4
93 313.03 wind 3.0 720 < th dose dependent sin 18 NA
97 313.20 wind 3.0 30 < th dose independent rect. 16 3
99 313.27 wind 5.0 270 < th dose dependent rect. 15 5
105 313.45 wind 3.0 4320 < th dose independent rect. 11 1
110 313.59 wind 3.0 4320 > th dose independent rect. 11 1
122 314.04 wind 3.0 90 < th dose dependent rect. 19 1
125 314.10 wind 1.0 14400 > th dose independent rect. 8 1
126 314.13 wind 5.0 30 > th dose dependent rect. 1 7
129 314.18 wind 3.0 720 < th dose independent rect. 22 1
140 314.33 wind 3.0 30 < th dose dependent rect. 16 3
141 314.35 wind 3.0 720 < th dose independent rect. 9 15
147 314.49 wind 1.0 1440 < th dose dependent rect. 14 1
151 314.59 precipitation 0.1 270 > th dose independent rect. 14 2
152 314.59 precipitation 0.1 270 > th dose dependent rect. 14 2
154 314.62 humidity 90.0 270 > th dose independent rect. 14 1
158 314.62 humidity 90.0 270 > th dose dependent rect. 14 1
169 314.76 wind 3.0 720 < th dose independent rect. 20 4
179 314.89 radiation 40.0 4320 < th dose dependent rect. 24 5
211 315.22 wind 3.0 270 < th dose independent rect. 14 18
212 315.22 wind 3.0 14400 < th dose dependent rect. 9 2
227 315.46 wind 3.0 14400 < th dose independent rect. 9 2
234 315.54 wind 5.0 270 < th dose dependent rect. 14 18
255 315.87 wind 3.0 30 < th dose independent rect. 16 19
263 315.97 wind 5.0 10 > th dose independent rect. 5 3
273 316.03 wind 5.0 10 > th dose independent rect. 1 7
275 316.03 wind 3.0 30 < th dose independent rect. 14 21
283 316.11 wind 1.0 43200 < th dose independent rect. 23 2
285 316.12 radiation 10.0 1440 < th dose dependent rect. 24 5
292 316.14 humidity 70.0 43200 > th dose dependent rect. 8 1
302 316.19 wind 1.0 1440 > th dose independent rect. 14 1
311 316.24 radiation 40.0 4320 < th dose dependent rect. 21 8
322 316.31 wind 3.0 30 < th dose dependent rect. 7 19
326 316.36 temperature 25.0 10 > th dose independent rect. 21 1
359 316.74 wind 1.0 43200 > th dose independent rect. 22 3
368 316.81 temperature 25.0 10 > th dose dependent rect. 7 1
385 316.91 radiation 1.0 30 > th dose independent rect. 5 3
402 316.95 wind 3.0 720 > th dose independent rect. 9 16
405 316.98 humidity 90.0 14400 < th dose dependent rect. 1 4
407 316.99 wind 3.0 720 < th dose independent sin 18 NA
409 316.99 wind 1.0 43200 > th dose independent rect. 18 7
413 317.02 wind 1.0 43200 > th dose independent rect. 23 1
449 317.25 wind 1.0 43200 < th dose independent rect. 18 7
453 317.26 humidity 90.0 14400 < th dose dependent rect. 3 2
469 317.34 wind 1.0 4320 < th dose independent rect. 14 1
496 317.47 wind 1.0 43200 > th dose independent rect. 20 5
519 317.62 wind 3.0 720 > th dose independent rect. 15 9
521 317.64 wind 3.0 720 > th dose independent rect. 19 4
537 317.70 precipitation 0.1 90 < th dose independent rect. 18 14
539 317.70 precipitation 0.1 90 < th dose dependent rect. 18 14
542 317.73 humidity 60.0 30 > th dose independent rect. 18 14
553 317.77 wind 1.0 43200 < th dose dependent rect. 17 8
555 317.79 wind 1.0 43200 > th dose independent rect. 17 10
574 317.87 temperature 25.0 10 > th dose independent rect. 14 21
581 317.91 wind 3.0 720 > th dose independent rect. 21 2
595 317.91 radiation 1.0 1440 < th dose dependent rect. 21 8
596 317.92 radiation 40.0 43200 < th dose independent rect. 16 13
606 317.95 wind 1.0 43200 < th dose dependent rect. 14 11
615 317.99 wind 3.0 30 > th dose independent rect. 11 15
629 318.05 wind 3.0 30 > th dose independent rect. 11 20
640 318.09 radiation 1.0 30 < th dose independent rect. 23 9
679 318.16 temperature 25.0 1440 > th dose independent rect. 17 1
694 318.23 wind 1.0 43200 < th dose dependent rect. 22 3
711 318.26 wind 3.0 270 < th dose dependent rect. 3 21
718 318.29 wind 3.0 30 < th dose dependent rect. 5 21
733 318.32 humidity 80.0 43200 > th dose independent rect. 19 2
734 318.32 wind 1.0 30 > th dose independent rect. 4 4
758 318.39 wind 1.0 43200 < th dose independent rect. 17 10
764 318.40 atmosphere 1005.0 1440 > th dose independent rect. 21 1
784 318.47 temperature 25.0 1440 < th dose independent rect. 16 5
789 318.48 wind 3.0 30 < th dose independent rect. 7 23
796 318.51 wind 3.0 720 > th dose independent sin 17 NA
820 318.58 wind 7.0 14400 < th dose independent rect. 13 1
835 318.61 wind 5.0 90 < th dose independent rect. 18 14
846 318.64 radiation 1.0 30 < th dose independent rect. 23 7
849 318.65 atmosphere 1005.0 90 < th dose independent rect. 5 2
854 318.65 wind 3.0 30 < th dose dependent rect. 7 17
861 318.68 temperature 25.0 1440 > th dose independent rect. 16 5
864 318.69 temperature 25.0 1440 < th dose independent rect. 17 2
866 318.69 wind 9.0 90 < th dose independent rect. 8 10
895 318.76 humidity 80.0 90 < th dose dependent rect. 7 1
916 318.84 wind 3.0 30 > th dose independent rect. 8 23
917 318.85 humidity 80.0 43200 < th dose independent rect. 19 2
924 318.86 radiation 10.0 1440 < th dose independent rect. 24 5
926 318.87 wind 7.0 14400 > th dose independent rect. 13 1
929 318.88 atmosphere 1005.0 10 < th dose independent rect. 5 3
962 318.97 humidity 70.0 43200 > th dose independent rect. 17 1
979 319.03 atmosphere 995.0 90 > th dose independent rect. 18 14
995 319.07 radiation 30.0 90 < th dose independent rect. 18 14