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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os07g0527800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Ankyrin repeat containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.16 (0.0159) R2 : 0.0015
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0277 (0.0335) R2dN8 : 0.00193 R2N8 : 0.0015
σ : 0.3
deviance : 41.24
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
39.14 0.294 3.06 0.886 0.0665 -0.606 -0.283 4.92 0.106 5.26 28.69 1739 -- --
40.36 0.296 3.16 0.0698 0.0945 -0.057 -0.313 -- 0.0193 5.02 33.7 1777 -- --
39.22 0.292 3.05 0.926 0.0778 -0.616 -- 5.08 0.121 7.44 28.57 1740 -- --
40.45 0.296 3.16 0.0686 0.107 -0.0506 -- -- 0.0261 6.84 33.98 1708 -- --
39.53 0.293 3.06 0.936 -- -0.633 -- 5.13 0.125 -- 28.5 1771 -- --
40.48 0.298 3.16 0.0575 0.0994 -- -0.266 -- 0.0309 5.84 -- -- -- --
40.58 0.298 3.15 0.0566 0.104 -- -- -- 0.0324 7.12 -- -- -- --
40.98 0.298 3.16 0.0692 -- -0.069 -- -- 0.029 -- 26.3 917 -- --
40.57 0.297 3.16 -- 0.105 -0.0434 -- -- 0.019 6.88 33.86 1717 -- --
41.15 0.3 3.16 0.0586 -- -- -- -- 0.0342 -- -- -- -- --
40.66 0.298 3.16 -- 0.105 -- -- -- 0.026 7.09 -- -- -- --
40.84 0.298 3.15 -- -- -0.108 -- -- 0.0408 -- 20.5 607 -- --
41.24 0.3 3.16 -- -- -- -- -- 0.0277 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 35.32 atmosphere 1005.0 90 > th dose dependent rect. 2 1
2 35.53 atmosphere 1005.0 10 > th dose dependent rect. 2 2
3 35.71 atmosphere 1000.0 30 > th dose independent rect. 3 23
5 35.72 radiation 1.0 14400 < th dose dependent rect. 3 1
11 35.98 wind 1.0 30 > th dose independent rect. 2 1
15 36.03 atmosphere 1005.0 30 > th dose independent rect. 2 1
18 36.04 atmosphere 995.0 30 > th dose dependent rect. 2 1
24 36.05 wind 3.0 30 < th dose independent rect. 2 1
30 36.06 wind 9.0 1440 < th dose independent rect. 3 1
31 36.06 temperature 10.0 1440 > th dose independent rect. 3 1
34 36.06 temperature 30.0 1440 < th dose independent rect. 3 1
38 36.06 humidity 50.0 1440 > th dose independent rect. 3 1
48 36.06 atmosphere 995.0 1440 > th dose independent rect. 3 1
49 36.06 radiation 1.0 1440 < th dose independent rect. 3 1
69 36.06 temperature 10.0 1440 > th dose independent rect. 4 23
72 36.06 temperature 30.0 30 < th dose dependent rect. 2 1
83 36.07 temperature 10.0 30 > th dose independent rect. 2 1
85 36.07 temperature 30.0 30 < th dose independent rect. 2 1
86 36.07 humidity 50.0 30 > th dose independent rect. 2 1
90 36.07 atmosphere 1010.0 30 < th dose independent rect. 2 1
92 36.07 radiation 1.0 30 < th dose independent rect. 2 1
97 36.07 precipitation 0.1 30 < th dose independent rect. 2 1
98 36.07 temperature 10.0 30 > th dose independent rect. 3 23
99 36.07 radiation 1.0 30 < th dose dependent rect. 2 1
104 36.07 precipitation 0.1 30 < th dose dependent rect. 2 1
106 36.08 wind 7.0 30 < th dose dependent rect. 2 1
108 36.08 temperature 10.0 30 > th dose dependent rect. 2 1
112 36.09 humidity 50.0 30 > th dose dependent rect. 2 1
114 36.10 temperature 25.0 90 > th dose independent rect. 1 1
123 36.12 atmosphere 1015.0 30 < th dose dependent rect. 2 1
171 36.30 precipitation 0.1 30 < th dose independent rect. 3 23
173 36.30 precipitation 0.1 30 < th dose dependent rect. 3 23
189 36.62 wind 9.0 30 < th dose independent rect. 3 23
205 36.95 humidity 90.0 90 < th dose independent rect. 1 3
206 36.98 humidity 50.0 30 > th dose independent rect. 3 23
209 37.03 humidity 90.0 90 < th dose independent rect. 2 1
276 37.86 atmosphere 995.0 720 > th dose independent rect. 23 16
326 38.12 precipitation 0.1 720 < th dose independent rect. 15 8
328 38.12 precipitation 0.1 720 < th dose dependent rect. 15 8
330 38.13 humidity 90.0 90 < th dose independent rect. 1 7
334 38.15 humidity 50.0 720 > th dose independent rect. 3 8
342 38.21 temperature 10.0 720 > th dose independent rect. 15 8
343 38.21 temperature 10.0 720 > th dose independent rect. 23 16
345 38.22 atmosphere 995.0 720 > th dose independent rect. 15 8
350 38.25 precipitation 0.1 720 < th dose independent rect. 11 16
351 38.25 precipitation 0.1 720 < th dose dependent rect. 11 16
353 38.27 atmosphere 995.0 720 > th dose independent rect. 11 16
354 38.27 temperature 30.0 30 < th dose independent rect. 3 23
357 38.28 temperature 10.0 720 > th dose independent rect. 3 8
358 38.28 atmosphere 995.0 720 > th dose independent rect. 3 8
360 38.28 temperature 10.0 720 > th dose independent rect. 11 16
364 38.30 radiation 10.0 30 < th dose dependent rect. 3 23
367 38.34 atmosphere 1015.0 30 < th dose independent rect. 3 23
374 38.37 humidity 70.0 30 > th dose dependent rect. 3 23
405 38.43 radiation 10.0 30 < th dose independent rect. 3 23
408 38.43 humidity 90.0 90 < th dose dependent rect. 1 6
409 38.44 humidity 90.0 90 < th dose independent rect. 1 15
419 38.47 wind 9.0 720 < th dose independent rect. 3 8
431 38.53 humidity 90.0 90 < th dose dependent rect. 1 3
434 38.54 humidity 90.0 90 < th dose dependent rect. 2 1
447 38.57 humidity 90.0 90 < th dose independent rect. 1 22
479 38.59 atmosphere 1000.0 10 > th dose independent rect. 2 14
506 38.65 humidity 80.0 720 > th dose dependent rect. 3 1
513 38.67 wind 5.0 14400 < th dose dependent rect. 11 1
515 38.67 temperature 10.0 30 > th dose dependent rect. 3 23
518 38.68 humidity 90.0 90 < th dose independent rect. 1 20
555 38.73 radiation 40.0 10 < th dose independent rect. 3 23
560 38.74 wind 9.0 720 < th dose independent rect. 15 8
565 38.74 humidity 80.0 14400 < th dose dependent rect. 2 7
567 38.75 temperature 30.0 720 < th dose independent rect. 15 8
573 38.76 atmosphere 1000.0 10 > th dose independent rect. 16 10
574 38.76 wind 3.0 30 < th dose dependent rect. 2 6
579 38.77 wind 1.0 14400 > th dose dependent rect. 11 1
590 38.78 wind 9.0 30 < th dose dependent rect. 3 23
592 38.79 radiation 10.0 10 < th dose independent rect. 16 10
613 38.82 wind 3.0 14400 > th dose dependent rect. 9 6
617 38.83 temperature 30.0 90 < th dose independent rect. 1 15
620 38.83 radiation 30.0 10 < th dose dependent rect. 16 10
623 38.84 radiation 30.0 10 < th dose independent rect. 16 10
625 38.84 humidity 90.0 10 < th dose dependent rect. 2 2
634 38.85 temperature 25.0 10 < th dose independent rect. 2 7
635 38.85 temperature 10.0 10 > th dose independent rect. 16 10
636 38.85 humidity 50.0 10 > th dose independent rect. 16 10
640 38.85 temperature 10.0 10 > th dose independent rect. 2 14
642 38.85 atmosphere 1015.0 10 < th dose independent rect. 2 14
643 38.85 precipitation 0.1 10 < th dose independent rect. 2 14
646 38.85 precipitation 0.1 10 < th dose dependent rect. 2 14
650 38.86 atmosphere 995.0 720 > th dose independent rect. 8 7
651 38.86 wind 9.0 10 < th dose independent rect. 16 10
659 38.87 wind 3.0 14400 > th dose independent rect. 10 3
662 38.87 wind 1.0 10 < th dose independent rect. 12 15
667 38.87 wind 7.0 14400 < th dose dependent rect. 10 5
673 38.88 wind 1.0 90 > th dose independent rect. 3 22
713 38.89 wind 5.0 14400 < th dose independent rect. 9 8
714 38.89 wind 1.0 10 < th dose independent rect. 17 10
715 38.89 precipitation 0.1 10 < th dose independent rect. 16 10
728 38.89 precipitation 0.1 10 < th dose dependent rect. 16 10
729 38.89 humidity 80.0 14400 < th dose dependent rect. 21 13
737 38.90 temperature 25.0 10 > th dose independent rect. 24 11
740 38.91 humidity 90.0 720 > th dose independent rect. 3 1
743 38.91 temperature 30.0 10 < th dose independent rect. 16 10
758 38.92 wind 5.0 14400 < th dose independent rect. 10 5
778 38.93 wind 5.0 14400 > th dose independent rect. 9 8
811 38.95 wind 3.0 14400 < th dose independent rect. 10 3
818 38.95 temperature 10.0 1440 > th dose independent rect. 17 10
821 38.95 radiation 30.0 1440 < th dose independent rect. 17 10
827 38.95 temperature 10.0 1440 > th dose independent rect. 3 14
845 38.96 wind 5.0 14400 < th dose independent rect. 11 1
885 38.97 wind 1.0 720 > th dose independent rect. 15 8
905 38.97 wind 3.0 30 < th dose dependent rect. 2 11
910 38.98 humidity 80.0 1440 > th dose independent rect. 24 2
911 38.98 humidity 90.0 10 < th dose independent rect. 2 2
932 38.99 wind 9.0 10 < th dose independent rect. 2 14
951 39.00 radiation 40.0 720 < th dose independent rect. 15 8
972 39.01 precipitation 0.1 720 < th dose independent rect. 15 16
973 39.01 wind 1.0 10 < th dose independent rect. 6 21
975 39.01 wind 1.0 10 > th dose independent rect. 8 23
985 39.01 precipitation 0.1 720 < th dose dependent rect. 15 16
995 39.02 precipitation 0.1 720 < th dose independent rect. 1 16