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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os07g0525300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Zinc finger, BED-type predicted domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.96 (0.0151) R2 : 0.000471
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0147 (0.0317) R2dN8 : 0.000608 R2N8 : 0.000471
σ : 0.284
deviance : 36.9
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
36.04 0.282 2.95 0.0101 0.0739 0.105 -0.0284 0.295 0.0237 6.77 80.1 1429 -- --
36.15 0.28 2.96 -0.0193 0.076 0.13 -0.0122 -- 0.0254 6.52 74 1484 -- --
36.04 0.28 2.95 0.00903 0.0739 0.105 -- 0.293 0.0239 6.67 79.77 1428 -- --
36.15 0.28 2.96 -0.019 0.0768 0.128 -- -- 0.0258 6.46 74 1483 -- --
36.32 0.281 2.96 0.0179 -- 0.105 -- 0.331 0.0213 -- 86.28 1312 -- --
36.58 0.284 2.96 0.00463 0.0786 -- 0.00569 -- 0.0138 6.26 -- -- -- --
36.58 0.283 2.96 0.00472 0.0786 -- -- -- 0.0137 6.28 -- -- -- --
36.44 0.281 2.96 -0.0187 -- 0.134 -- -- 0.0268 -- 74.42 1409 -- --
36.13 0.28 2.95 -- 0.0891 0.142 -- -- 0.0283 6.56 74.45 3241 -- --
36.9 0.284 2.96 0.00683 -- -- -- -- 0.0155 -- -- -- -- --
36.58 0.283 2.96 -- 0.0787 -- -- -- 0.0132 6.28 -- -- -- --
36.45 0.281 2.95 -- -- 0.13 -- -- 0.0385 -- 71 2834 -- --
36.9 0.284 2.96 -- -- -- -- -- 0.0147 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 33.94 wind 1.0 30 < th dose independent rect. 10 1
2 33.94 temperature 10.0 1440 > th dose independent rect. 11 1
6 33.94 atmosphere 995.0 1440 > th dose independent rect. 11 1
9 33.94 precipitation 0.1 1440 < th dose independent rect. 11 1
10 33.94 temperature 10.0 1440 > th dose independent rect. 12 23
13 33.94 wind 1.0 30 < th dose dependent rect. 10 1
14 33.94 precipitation 0.1 1440 < th dose dependent rect. 11 1
15 34.04 temperature 25.0 30 > th dose dependent rect. 10 1
16 34.05 humidity 70.0 30 < th dose independent rect. 10 1
17 34.05 atmosphere 1010.0 30 < th dose independent rect. 10 1
19 34.11 temperature 25.0 30 > th dose independent rect. 10 1
21 34.13 radiation 40.0 30 < th dose independent rect. 10 1
22 34.14 radiation 20.0 30 > th dose independent rect. 10 1
23 34.15 atmosphere 1005.0 30 > th dose independent rect. 10 1
25 34.16 humidity 80.0 30 < th dose dependent rect. 10 1
31 34.19 atmosphere 995.0 30 > th dose dependent rect. 10 1
35 34.21 temperature 30.0 30 < th dose independent rect. 10 1
36 34.21 humidity 60.0 30 > th dose independent rect. 10 1
37 34.21 wind 5.0 30 < th dose dependent rect. 10 1
44 34.24 temperature 10.0 30 > th dose independent rect. 10 1
47 34.24 humidity 90.0 30 < th dose independent rect. 10 1
51 34.24 precipitation 0.1 30 < th dose independent rect. 10 1
52 34.24 temperature 10.0 30 > th dose independent rect. 11 23
53 34.24 precipitation 0.1 30 < th dose dependent rect. 10 1
54 34.25 wind 1.0 30 > th dose independent rect. 10 1
57 34.31 radiation 40.0 30 < th dose dependent rect. 10 1
58 34.32 radiation 1.0 30 > th dose dependent rect. 10 1
61 34.43 humidity 50.0 30 > th dose dependent rect. 10 1
62 34.43 atmosphere 1015.0 30 < th dose dependent rect. 10 1
65 34.53 wind 1.0 30 > th dose dependent rect. 10 1
107 35.09 wind 9.0 30 < th dose independent rect. 11 23
116 35.48 precipitation 0.1 30 < th dose independent rect. 11 23
117 35.48 precipitation 0.1 30 < th dose dependent rect. 11 23
123 35.66 atmosphere 995.0 30 > th dose independent rect. 11 23
132 35.83 atmosphere 995.0 270 > th dose independent rect. 1 23
133 35.85 wind 1.0 10 < th dose independent rect. 4 1
135 35.87 temperature 25.0 10 < th dose independent rect. 4 1
136 35.87 humidity 50.0 1440 > th dose independent rect. 13 1
137 35.90 humidity 60.0 720 < th dose independent rect. 16 1
139 35.91 wind 1.0 10 < th dose independent rect. 1 4
141 35.91 humidity 50.0 30 > th dose independent rect. 11 23
143 35.92 temperature 25.0 10 < th dose dependent rect. 4 1
144 35.92 humidity 50.0 720 < th dose dependent rect. 16 1
146 35.93 humidity 90.0 10 > th dose independent rect. 4 1
147 35.93 atmosphere 1015.0 10 < th dose independent rect. 5 23
148 35.93 humidity 90.0 10 > th dose dependent rect. 4 1
149 35.93 humidity 80.0 720 < th dose dependent rect. 16 1
153 35.95 atmosphere 1005.0 30 > th dose dependent rect. 24 1
158 35.96 humidity 60.0 1440 < th dose dependent rect. 13 2
162 35.98 wind 9.0 30 < th dose independent rect. 1 23
167 35.99 wind 7.0 1440 < th dose independent rect. 1 1
173 36.00 temperature 25.0 4320 > th dose dependent rect. 4 1
176 36.00 atmosphere 1010.0 10 < th dose dependent rect. 4 1
180 36.00 temperature 25.0 270 > th dose dependent rect. 19 16
183 36.01 temperature 30.0 30 < th dose independent rect. 11 23
193 36.02 atmosphere 1005.0 30 > th dose independent rect. 24 1
194 36.02 humidity 60.0 14400 < th dose independent rect. 11 2
195 36.02 humidity 60.0 1440 < th dose independent rect. 12 5
196 36.02 humidity 70.0 720 < th dose independent rect. 15 18
198 36.02 humidity 80.0 1440 < th dose dependent sin 2 NA
207 36.02 humidity 90.0 1440 < th dose dependent rect. 6 8
210 36.02 humidity 80.0 1440 < th dose dependent rect. 8 9
234 36.02 humidity 80.0 1440 < th dose dependent rect. 20 20
239 36.02 humidity 70.0 10 > th dose dependent rect. 5 23
241 36.03 wind 3.0 30 < th dose independent rect. 24 1
244 36.03 humidity 60.0 1440 < th dose independent rect. 12 1
249 36.03 humidity 80.0 4320 < th dose independent rect. 2 9
250 36.03 atmosphere 995.0 720 > th dose independent rect. 1 15
254 36.03 humidity 70.0 1440 < th dose independent rect. 16 21
256 36.03 atmosphere 995.0 10 > th dose independent rect. 5 23
257 36.03 atmosphere 1015.0 30 < th dose independent rect. 1 23
258 36.03 humidity 80.0 1440 < th dose dependent sin 0 NA
265 36.03 wind 3.0 10 < th dose dependent rect. 4 1
269 36.03 humidity 90.0 1440 < th dose dependent rect. 10 4
275 36.03 humidity 90.0 1440 < th dose dependent rect. 8 6
329 36.03 humidity 80.0 1440 < th dose dependent rect. 20 18
345 36.04 humidity 50.0 14400 > th dose independent sin 12 NA
346 36.04 wind 1.0 30 > th dose independent rect. 24 1
347 36.04 wind 7.0 30 < th dose independent rect. 24 1
349 36.04 temperature 10.0 1440 > th dose independent rect. 1 1
352 36.04 temperature 10.0 30 > th dose independent rect. 24 1
354 36.04 temperature 30.0 1440 < th dose independent rect. 1 1
358 36.04 temperature 30.0 30 < th dose independent rect. 24 1
359 36.04 humidity 50.0 1440 > th dose independent rect. 1 1
370 36.04 humidity 50.0 30 > th dose independent rect. 24 1
374 36.04 humidity 90.0 30 < th dose independent rect. 24 1
375 36.04 atmosphere 995.0 1440 > th dose independent rect. 1 1
377 36.04 radiation 1.0 1440 < th dose independent rect. 1 1
397 36.04 radiation 1.0 30 < th dose independent rect. 24 1
402 36.04 precipitation 0.1 30 < th dose independent rect. 24 1
409 36.04 humidity 60.0 1440 > th dose independent rect. 12 5
414 36.04 humidity 80.0 4320 < th dose independent rect. 4 7
418 36.04 humidity 80.0 4320 > th dose independent rect. 2 9
426 36.04 humidity 70.0 720 > th dose independent rect. 16 14
430 36.04 humidity 70.0 14400 < th dose independent rect. 18 16
432 36.04 humidity 50.0 14400 > th dose independent rect. 15 20
437 36.04 temperature 10.0 30 > th dose independent rect. 1 23
438 36.04 temperature 10.0 1440 > th dose independent rect. 2 23
442 36.04 humidity 50.0 1440 > th dose dependent sin 2 NA
444 36.04 humidity 60.0 14400 < th dose dependent sin 13 NA
446 36.04 humidity 80.0 1440 < th dose dependent sin 22 NA
450 36.04 humidity 80.0 1440 < th dose dependent no NA NA
451 36.04 wind 9.0 30 < th dose dependent rect. 24 1
452 36.04 temperature 30.0 30 < th dose dependent rect. 24 1
457 36.04 radiation 1.0 1440 < th dose dependent rect. 1 1
462 36.04 radiation 1.0 30 < th dose dependent rect. 24 1
467 36.04 precipitation 0.1 30 < th dose dependent rect. 24 1
470 36.04 humidity 50.0 1440 > th dose dependent rect. 11 2
478 36.04 humidity 60.0 14400 < th dose dependent rect. 14 4
492 36.04 humidity 50.0 1440 > th dose dependent rect. 7 7
604 36.04 humidity 60.0 14400 < th dose dependent rect. 14 19
648 36.04 humidity 80.0 1440 < th dose dependent rect. 12 23
649 36.04 humidity 80.0 1440 < th dose dependent rect. 15 23
656 36.05 wind 1.0 14400 < th dose independent rect. 5 1
658 36.05 temperature 25.0 30 > th dose independent rect. 24 1
661 36.05 atmosphere 1000.0 10 < th dose independent rect. 18 2
668 36.05 atmosphere 1000.0 90 < th dose independent rect. 17 3
684 36.05 humidity 70.0 14400 > th dose independent rect. 19 15
691 36.05 humidity 70.0 1440 < th dose independent rect. 18 19
693 36.05 humidity 60.0 14400 < th dose independent rect. 18 20
694 36.05 humidity 70.0 1440 > th dose independent rect. 16 21
696 36.05 humidity 60.0 14400 < th dose independent rect. 16 21
709 36.05 wind 1.0 30 > th dose dependent rect. 24 1
710 36.05 wind 5.0 30 < th dose dependent rect. 24 1
712 36.05 temperature 10.0 30 > th dose dependent rect. 24 1
715 36.05 humidity 50.0 30 > th dose dependent rect. 24 1
718 36.05 humidity 90.0 14400 < th dose dependent rect. 12 1
720 36.05 humidity 90.0 30 < th dose dependent rect. 24 1
728 36.05 atmosphere 1000.0 10 < th dose dependent rect. 18 2
911 36.06 temperature 20.0 10 > th dose independent rect. 4 1
915 36.06 temperature 30.0 720 > th dose independent rect. 16 2
929 36.06 humidity 80.0 4320 > th dose independent rect. 4 7
969 36.06 humidity 70.0 1440 > th dose independent rect. 16 19
970 36.06 humidity 70.0 1440 > th dose independent rect. 18 19
971 36.06 humidity 60.0 14400 > th dose independent rect. 18 19
995 36.06 humidity 80.0 720 < th dose dependent sin 15 NA