Os07g0524000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0524000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 248.52 | 0.741 | 6.51 | -3.09 | 1.22 | -0.974 | 2.41 | 2.05 | -0.694 | 21.8 | 72.39 | 1500 | -- | -- |
| 257.32 | 0.747 | 6.47 | -2.78 | 1.21 | -0.868 | 2.53 | -- | -0.61 | 21.8 | 72.42 | 1495 | -- | -- |
| 270.54 | 0.766 | 6.51 | -3.18 | 1.2 | -1 | -- | 2.27 | -0.693 | 21.8 | 72.14 | 1511 | -- | -- |
| 278.93 | 0.778 | 6.47 | -2.86 | 1.09 | -0.938 | -- | -- | -0.62 | 20.9 | 73 | 1254 | -- | -- |
| 314.25 | 0.826 | 6.46 | -3.24 | -- | -1.7 | -- | 1.27 | -0.6 | -- | 74 | 879 | -- | -- |
| 283.77 | 0.79 | 6.45 | -2.62 | 1.18 | -- | 2.62 | -- | -0.502 | 21.7 | -- | -- | -- | -- |
| 309.44 | 0.824 | 6.45 | -2.72 | 1.17 | -- | -- | -- | -0.505 | 21.5 | -- | -- | -- | -- |
| 304.17 | 0.812 | 6.44 | -2.91 | -- | -1.57 | -- | -- | -0.603 | -- | 73.85 | 879 | -- | -- |
| 404.21 | 0.936 | 6.36 | -- | 1.18 | -1.99 | -- | -- | -0.109 | 21.4 | 64.96 | 47520 | -- | -- |
| 390.43 | 0.923 | 6.42 | -2.71 | -- | -- | -- | -- | -0.508 | -- | -- | -- | -- | -- |
| 504.44 | 1.05 | 6.38 | -- | 1.17 | -- | -- | -- | -0.202 | 21.3 | -- | -- | -- | -- |
| 485.82 | 1.03 | 6.33 | -- | -- | -1.97 | -- | -- | -0.115 | -- | 64.38 | 47520 | -- | -- |
| 584.47 | 1.13 | 6.35 | -- | -- | -- | -- | -- | -0.207 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 242.25 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 5 | 22 |
| 2 | 243.86 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 4 | 244.44 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 6 | 245.25 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 6 | 10 |
| 14 | 246.28 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 16 | 246.32 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 17 | 246.32 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 18 | 246.36 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 17 | 4 |
| 22 | 246.53 | wind | 9.0 | 43200 | > th | dose independent | rect. | 16 | 16 |
| 24 | 246.58 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 25 | 246.76 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 5 | 22 |
| 29 | 246.87 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 6 | 15 |
| 32 | 247.01 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 14 | 8 |
| 43 | 247.08 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 15 | 17 |
| 44 | 247.11 | wind | 9.0 | 43200 | > th | dose independent | rect. | 17 | 12 |
| 46 | 247.13 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 4 | 2 |
| 47 | 247.15 | wind | 7.0 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 50 | 247.24 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 22 | 1 |
| 56 | 247.45 | wind | 9.0 | 43200 | < th | dose independent | rect. | 16 | 16 |
| 60 | 247.50 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 13 | 5 |
| 68 | 247.68 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 14 | 8 |
| 81 | 247.75 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 82 | 247.77 | wind | 7.0 | 43200 | < th | dose independent | rect. | 15 | 18 |
| 95 | 247.91 | wind | 7.0 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 108 | 248.06 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 17 | 6 |
| 127 | 248.34 | wind | 3.0 | 90 | < th | dose dependent | rect. | 3 | 2 |
| 136 | 248.41 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 17 | 8 |
| 138 | 248.45 | wind | 9.0 | 43200 | > th | dose independent | sin | 13 | NA |
| 145 | 248.52 | humidity | 70.0 | 90 | > th | dose independent | rect. | 5 | 22 |
| 147 | 248.54 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 8 | 14 |
| 160 | 248.61 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 10 | 12 |
| 166 | 248.66 | wind | 9.0 | 43200 | > th | dose dependent | sin | 14 | NA |
| 167 | 248.67 | wind | 9.0 | 43200 | > th | dose independent | rect. | 17 | 7 |
| 200 | 248.85 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 5 | 14 |
| 210 | 248.91 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 219 | 249.02 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 17 | 19 |
| 223 | 249.04 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 245 | 249.15 | atmosphere | 995.0 | 14400 | < th | dose independent | sin | 22 | NA |
| 260 | 249.24 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 270 | 249.30 | atmosphere | 1000.0 | 14400 | < th | dose dependent | rect. | 22 | 1 |
| 280 | 249.33 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 10 | 11 |
| 284 | 249.38 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 10 | 11 |
| 294 | 249.41 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 7 | 22 |
| 305 | 249.46 | wind | 9.0 | 43200 | < th | dose independent | sin | 13 | NA |
| 306 | 249.46 | atmosphere | 995.0 | 14400 | > th | dose independent | sin | 22 | NA |
| 326 | 249.53 | atmosphere | 1000.0 | 14400 | < th | dose dependent | rect. | 20 | 9 |
| 332 | 249.55 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 10 | 9 |
| 360 | 249.63 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 5 | 14 |
| 395 | 249.73 | atmosphere | 1005.0 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 407 | 249.76 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 20 | 10 |
| 410 | 249.77 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 19 | 12 |
| 412 | 249.77 | atmosphere | 1005.0 | 14400 | < th | dose dependent | rect. | 14 | 11 |
| 414 | 249.78 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 19 | 14 |
| 431 | 249.80 | atmosphere | 1000.0 | 14400 | < th | dose dependent | rect. | 1 | 2 |
| 487 | 249.91 | wind | 9.0 | 43200 | < th | dose independent | rect. | 17 | 7 |
| 584 | 250.05 | atmosphere | 1005.0 | 14400 | < th | dose dependent | sin | 16 | NA |
| 604 | 250.08 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 19 | 15 |
| 656 | 250.17 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 7 | 2 |
| 748 | 250.32 | humidity | 50.0 | 1440 | > th | dose dependent | sin | 20 | NA |
| 822 | 250.42 | humidity | 90.0 | 1440 | < th | dose dependent | sin | 20 | NA |
| 936 | 250.59 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 5 | 5 |
| 995 | 250.65 | atmosphere | 1005.0 | 14400 | > th | dose independent | sin | 10 | NA |