Os07g0521600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to NBS-LRR protein (Fragment).
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Os07g0521600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to NBS-LRR protein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25.29 | 0.236 | 8.02 | 1.38 | 0.312 | -0.392 | -0.0968 | 1.34 | 0.0553 | 5.85 | 29.28 | 2465 | -- | -- |
| 25.48 | 0.235 | 8.05 | 1.09 | 0.339 | -0.295 | -0.126 | -- | 0.0291 | 5.47 | 27.5 | 2494 | -- | -- |
| 25.3 | 0.234 | 8.01 | 1.42 | 0.311 | -0.391 | -- | 1.39 | 0.0684 | 5.87 | 29.1 | 2491 | -- | -- |
| 25.4 | 0.235 | 8.05 | 1.07 | 0.323 | -0.269 | -- | -- | 0.0138 | 5.87 | 27.5 | 2508 | -- | -- |
| 28.32 | 0.248 | 7.99 | 1.57 | -- | -0.479 | -- | 1.8 | 0.148 | -- | 28.24 | 1897 | -- | -- |
| 28.06 | 0.248 | 8.06 | 0.973 | 0.332 | -- | -0.0716 | -- | -0.0378 | 6.4 | -- | -- | -- | -- |
| 28.08 | 0.248 | 8.06 | 0.972 | 0.332 | -- | -- | -- | -0.0375 | 6.44 | -- | -- | -- | -- |
| 25.44 | 0.235 | 8.05 | 1.08 | -- | -0.368 | -- | -- | 0.0322 | -- | 26.85 | 437 | -- | -- |
| 52.53 | 0.338 | 8.08 | -- | 0.336 | 0.122 | -- | -- | -0.164 | 6.37 | 26 | 5587 | -- | -- |
| 33.8 | 0.272 | 8.06 | 0.981 | -- | -- | -- | -- | -0.0306 | -- | -- | -- | -- | -- |
| 53 | 0.341 | 8.08 | -- | 0.345 | -- | -- | -- | -0.146 | 6.28 | -- | -- | -- | -- |
| 43.04 | 0.306 | 8.12 | -- | -- | 0.636 | -- | -- | -0.292 | -- | 18.47 | 47520 | -- | -- |
| 59.18 | 0.359 | 8.09 | -- | -- | -- | -- | -- | -0.139 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 23.30 | temperature | 30.0 | 90 | < th | dose independent | rect. | 5 | 11 |
| 13 | 24.80 | temperature | 30.0 | 90 | < th | dose independent | rect. | 20 | 19 |
| 17 | 24.85 | temperature | 30.0 | 90 | < th | dose independent | rect. | 19 | 21 |
| 21 | 24.92 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 24 | 19 |
| 22 | 25.00 | radiation | 20.0 | 90 | < th | dose independent | rect. | 15 | 14 |
| 23 | 25.00 | radiation | 20.0 | 720 | < th | dose dependent | rect. | 5 | 2 |
| 24 | 25.02 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 25 | 25.02 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 26 | 25.02 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 28 | 25.03 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 2 |
| 34 | 25.08 | radiation | 40.0 | 90 | < th | dose independent | rect. | 5 | 10 |
| 36 | 25.08 | radiation | 1.0 | 720 | > th | dose independent | rect. | 17 | 19 |
| 42 | 25.12 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 7 | 5 |
| 44 | 25.12 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 17 | 19 |
| 47 | 25.15 | temperature | 25.0 | 720 | < th | dose independent | rect. | 5 | 2 |
| 51 | 25.17 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 9 | 1 |
| 53 | 25.18 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 15 | 14 |
| 55 | 25.19 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 59 | 25.20 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 61 | 25.20 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 8 | 4 |
| 69 | 25.22 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 5 | 11 |
| 73 | 25.24 | temperature | 30.0 | 90 | < th | dose independent | rect. | 5 | 20 |
| 82 | 25.26 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 84 | 25.26 | temperature | 30.0 | 90 | < th | dose independent | rect. | 5 | 22 |
| 95 | 25.29 | temperature | 25.0 | 720 | > th | dose dependent | sin | 9 | NA |
| 102 | 25.30 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 5 | 10 |
| 105 | 25.31 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 126 | 25.33 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 127 | 25.33 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 18 | 1 |
| 131 | 25.33 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 18 | 5 |
| 132 | 25.33 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 18 | 8 |
| 147 | 25.34 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 24 | 10 |
| 150 | 25.35 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 152 | 25.35 | wind | 1.0 | 720 | > th | dose independent | rect. | 4 | 3 |
| 153 | 25.35 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 5 | 4 |
| 158 | 25.35 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 4 |
| 161 | 25.36 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 165 | 25.36 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 7 | 12 |
| 182 | 25.38 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 2 | 7 |
| 205 | 25.40 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 5 | 11 |
| 215 | 25.41 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 229 | 25.41 | temperature | 25.0 | 1440 | > th | dose dependent | sin | 7 | NA |
| 242 | 25.42 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 246 | 25.42 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 21 | 12 |
| 247 | 25.42 | wind | 7.0 | 90 | < th | dose independent | rect. | 16 | 13 |
| 250 | 25.42 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 1 | 2 |
| 251 | 25.42 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 255 | 25.42 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 2 | 8 |
| 277 | 25.44 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 278 | 25.44 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 5 | 2 |
| 306 | 25.46 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 313 | 25.47 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 23 | 2 |
| 339 | 25.49 | wind | 1.0 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 343 | 25.49 | radiation | 40.0 | 90 | < th | dose independent | rect. | 5 | 20 |
| 363 | 25.50 | radiation | 40.0 | 90 | < th | dose independent | rect. | 5 | 22 |
| 373 | 25.51 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 375 | 25.51 | wind | 1.0 | 43200 | > th | dose independent | rect. | 24 | 4 |
| 414 | 25.53 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 415 | 25.53 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 417 | 25.53 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 419 | 25.53 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 420 | 25.53 | radiation | 1.0 | 720 | < th | dose independent | rect. | 5 | 1 |
| 424 | 25.53 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 20 | 3 |
| 425 | 25.53 | wind | 1.0 | 43200 | < th | dose independent | rect. | 24 | 4 |
| 428 | 25.53 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 23 | 8 |
| 429 | 25.53 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 22 | 10 |
| 445 | 25.54 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 452 | 25.54 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 3 | 4 |
| 456 | 25.54 | temperature | 10.0 | 90 | > th | dose independent | rect. | 5 | 11 |
| 457 | 25.54 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 5 | 11 |
| 458 | 25.54 | temperature | 10.0 | 90 | > th | dose independent | rect. | 16 | 13 |
| 461 | 25.54 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 472 | 25.55 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 474 | 25.55 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 484 | 25.55 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 3 | 5 |
| 505 | 25.56 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 506 | 25.56 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 518 | 25.56 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 23 | 5 |
| 535 | 25.56 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 10 |
| 537 | 25.56 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 5 | 11 |
| 543 | 25.56 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 1 | 7 |
| 544 | 25.56 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 10 |
| 545 | 25.56 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 5 | 11 |
| 547 | 25.56 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 15 | 15 |
| 549 | 25.56 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 1 | 19 |
| 551 | 25.57 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 568 | 25.57 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 22 | 8 |
| 572 | 25.57 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 10 |
| 573 | 25.57 | wind | 1.0 | 720 | > th | dose independent | rect. | 19 | 13 |
| 584 | 25.58 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 600 | 25.58 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 24 | 6 |
| 615 | 25.58 | wind | 1.0 | 270 | > th | dose independent | rect. | 17 | 22 |
| 629 | 25.59 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 672 | 25.59 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 686 | 25.60 | atmosphere | 1000.0 | 43200 | < th | dose independent | sin | 12 | NA |
| 732 | 25.60 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 12 | 12 |
| 735 | 25.60 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 11 | 13 |
| 751 | 25.60 | radiation | 20.0 | 270 | < th | dose independent | rect. | 19 | 14 |
| 759 | 25.60 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 21 | 16 |
| 760 | 25.60 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 20 | 17 |
| 771 | 25.60 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 11 | 19 |
| 784 | 25.60 | wind | 3.0 | 270 | < th | dose dependent | rect. | 1 | 3 |
| 785 | 25.60 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 6 | 3 |
| 787 | 25.60 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 22 | 4 |
| 799 | 25.60 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 19 | 16 |
| 807 | 25.61 | atmosphere | 1000.0 | 43200 | > th | dose independent | sin | 9 | NA |
| 815 | 25.61 | atmosphere | 1000.0 | 43200 | < th | dose independent | sin | 8 | NA |
| 823 | 25.61 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 824 | 25.61 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 868 | 25.61 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 12 | 11 |