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Os07g0518500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Cytochrome P450 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.88 (0.0679) R2 : 0.797
β1 : 0.965 (0.488) R2dD : 0.019 R2D : 0.114
β2 : 3.06 (0.108) R2dC : 0.364 R2C : 0.357
β3 : -1.59 (0.348) R2dE : 0.0726 R2E : -0.113
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : 19.1 (2.69) R2dD*E : 0.344 R2D*E : 0.279
γ1 : 1.34 (0.0921) R2dN8 : 0.14 R2N8 : 0.00441
σ : 0.769
deviance : 272.27
__
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C
peak time of C : 18.3
E
wheather : temperature
threshold : 29.93
memory length : 4221
response mode : < th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
264.58 0.764 9.88 1 3.05 -1.59 1.77 19 1.34 18.2 29.9 4220 -- --
304.23 0.819 9.47 4.21 3.12 1.14 1.9 -- 1.61 18.2 16.7 47116 -- --
272.27 0.769 9.88 0.965 3.06 -1.59 -- 19.1 1.34 18.3 29.93 4221 -- --
308.78 0.818 9.41 4.62 3.06 0.721 -- -- 1.96 18.1 31.6 34299 -- --
753.75 1.28 9.91 0.0438 -- -1.87 -- 22.4 1.05 -- 29.76 4183 -- --
310.3 0.826 9.48 4.11 3.12 -- 1.9 -- 1.58 18.2 -- -- -- --
319.17 0.837 9.47 4.09 3.13 -- -- -- 1.59 18.2 -- -- -- --
784.28 1.3 9.35 4.23 -- 0.927 -- -- 1.87 -- 33.2 12796 -- --
518.16 1.06 9.51 -- 3.02 -2.07 -- -- 1.32 18.2 35.17 47520 -- --
827.8 1.34 9.42 4 -- -- -- -- 1.52 -- -- -- -- --
759.13 1.29 9.57 -- 3.07 -- -- -- 1.14 18.3 -- -- -- --
1004.32 1.48 9.47 -- -- -2.04 -- -- 1.3 -- 35.2 47520 -- --
1249.59 1.65 9.52 -- -- -- -- -- 1.08 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 254.81 wind 1 43200 > th dose independent rect. 5 1
2 255.55 humidity 90 1440 < th dose dependent rect. 2 10
7 256.84 wind 1 14400 < th dose independent rect. 4 2
9 257.32 humidity 50 1440 > th dose dependent rect. 5 7
11 257.42 wind 3 43200 < th dose dependent rect. 4 2
18 258.22 wind 1 43200 < th dose dependent rect. 3 4
42 259.71 humidity 60 1440 > th dose dependent rect. 11 1
54 260.25 wind 1 43200 > th dose independent rect. 3 4
64 260.55 wind 1 43200 < th dose independent rect. 2 7
72 261.00 humidity 90 1440 < th dose dependent sin 6 NA
74 261.04 humidity 70 1440 > th dose independent rect. 19 17
80 261.25 wind 1 43200 > th dose independent rect. 1 6
83 261.41 wind 1 43200 < th dose independent rect. 2 11
132 262.42 humidity 70 1440 > th dose independent rect. 11 1
133 262.43 wind 1 43200 > th dose independent rect. 2 11
162 262.99 humidity 70 1440 > th dose independent sin 9 NA
173 263.29 humidity 50 1440 > th dose dependent sin 5 NA
174 263.34 humidity 80 1440 > th dose independent rect. 6 6
195 263.78 humidity 70 1440 < th dose independent rect. 18 18
220 264.20 temperature 30 4320 > th dose independent rect. 18 21
222 264.23 humidity 70 1440 > th dose independent rect. 24 13
226 264.27 humidity 70 1440 > th dose independent rect. 2 11
247 264.41 temperature 30 4320 < th dose independent rect. 18 21
263 264.71 temperature 30 4320 > th dose independent rect. 10 5
275 264.80 temperature 30 4320 > th dose independent rect. 8 7
313 264.94 temperature 30 4320 < th dose independent rect. 8 7
314 264.95 temperature 30 4320 < th dose independent rect. 3 12
317 264.96 temperature 30 4320 < th dose independent rect. 1 14
318 264.97 temperature 30 4320 < th dose independent rect. 6 9
330 265.03 radiation 20 1440 < th dose independent rect. 16 15
331 265.03 temperature 30 4320 < th dose independent rect. 21 18
335 265.04 temperature 30 4320 < th dose independent rect. 23 16
377 265.33 temperature 30 4320 < th dose independent sin 1 NA
382 265.41 temperature 30 4320 < th dose independent rect. 8 11
384 265.41 temperature 30 4320 < th dose independent rect. 8 16
385 265.41 temperature 30 4320 < th dose independent rect. 3 17
387 265.42 temperature 30 4320 < th dose independent rect. 8 14
389 265.42 temperature 30 4320 < th dose independent rect. 1 19
390 265.42 temperature 30 4320 < th dose independent rect. 3 19
391 265.42 temperature 30 4320 < th dose independent rect. 3 21
404 265.43 temperature 30 4320 < th dose independent rect. 6 18
407 265.43 temperature 30 4320 < th dose independent rect. 1 21
408 265.43 temperature 30 4320 < th dose independent rect. 1 23
438 265.46 temperature 30 4320 > th dose independent sin 1 NA
447 265.47 temperature 30 4320 < th dose independent rect. 8 20
449 265.47 temperature 30 4320 < th dose independent rect. 23 21
451 265.47 temperature 30 4320 < th dose independent rect. 21 22
464 265.49 temperature 30 4320 < th dose independent no NA NA
493 265.50 temperature 30 4320 < th dose independent rect. 14 23
509 265.52 temperature 25 4320 > th dose independent rect. 6 1
533 265.57 temperature 30 4320 < th dose independent rect. 12 23
535 265.58 temperature 30 4320 > th dose independent no NA NA
536 265.58 temperature 30 4320 > th dose independent rect. 8 11
634 265.59 temperature 30 4320 > th dose independent rect. 10 23
652 265.60 temperature 30 4320 > th dose independent rect. 12 23
693 265.68 humidity 70 1440 < th dose independent sin 9 NA
758 266.00 temperature 25 4320 < th dose independent rect. 6 1
801 266.19 humidity 80 1440 < th dose independent rect. 6 6
815 266.26 humidity 70 4320 > th dose independent rect. 19 13
826 266.37 wind 1 43200 < th dose dependent rect. 2 11
881 266.76 humidity 70 1440 < th dose independent rect. 11 1
939 267.28 radiation 20 1440 < th dose independent rect. 16 1
972 267.41 wind 1 43200 > th dose dependent rect. 5 1
999 267.60 radiation 20 1440 > th dose independent rect. 16 20