Os07g0516500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os07g0516500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 28.56 | 0.251 | 12.4 | -0.734 | 0.609 | -0.5 | -0.199 | -0.387 | 0.164 | 1.27 | 25.3 | 252 | -- | -- |
| 28.76 | 0.25 | 12.4 | -0.781 | 0.619 | -0.457 | -0.275 | -- | 0.161 | 1.34 | 25.69 | 267 | -- | -- |
| 28.7 | 0.25 | 12.4 | -0.713 | 0.61 | -0.509 | -- | -0.504 | 0.169 | 1.29 | 25.3 | 237 | -- | -- |
| 29.01 | 0.251 | 12.4 | -0.791 | 0.599 | -0.474 | -- | -- | 0.148 | 1.38 | 25.7 | 301 | -- | -- |
| 43.06 | 0.306 | 12.4 | -0.834 | -- | -0.743 | -- | -0.284 | 0.0955 | -- | 26.16 | 939 | -- | -- |
| 31.94 | 0.265 | 12.4 | -0.679 | 0.549 | -- | -0.287 | -- | 0.248 | 0.914 | -- | -- | -- | -- |
| 32.28 | 0.266 | 12.4 | -0.669 | 0.55 | -- | -- | -- | 0.25 | 0.953 | -- | -- | -- | -- |
| 42.94 | 0.305 | 12.4 | -0.859 | -- | -0.713 | -- | -- | 0.0991 | -- | 26.68 | 953 | -- | -- |
| 43.74 | 0.308 | 12.4 | -- | 0.554 | -0.143 | -- | -- | 0.298 | 1.04 | 25.6 | 299 | -- | -- |
| 51.09 | 0.334 | 12.4 | -0.649 | -- | -- | -- | -- | 0.26 | -- | -- | -- | -- | -- |
| 44.08 | 0.311 | 12.4 | -- | 0.539 | -- | -- | -- | 0.324 | 0.9 | -- | -- | -- | -- |
| 57.59 | 0.353 | 12.4 | -- | -- | 0.55 | -- | -- | 0.395 | -- | 47.51 | 10 | -- | -- |
| 62.19 | 0.368 | 12.4 | -- | -- | -- | -- | -- | 0.332 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 27.75 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 21 | 14 |
| 11 | 28.14 | temperature | 20.0 | 270 | > th | dose dependent | sin | 9 | NA |
| 14 | 28.19 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 22 | 28.29 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 27 | 28.34 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 28 | 28.34 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 3 |
| 29 | 28.34 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 34 | 28.41 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 3 |
| 35 | 28.43 | temperature | 30.0 | 270 | < th | dose dependent | sin | 8 | NA |
| 38 | 28.45 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 41 | 28.47 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 42 | 28.47 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 48 | 28.50 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 52 | 28.51 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 53 | 28.51 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 56 | 28.52 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 8 | 23 |
| 57 | 28.52 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 12 | 23 |
| 62 | 28.53 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 74 | 28.56 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 83 | 28.58 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 85 | 28.58 | temperature | 25.0 | 270 | < th | dose dependent | no | NA | NA |
| 91 | 28.58 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 106 | 28.61 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 108 | 28.61 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 2 |
| 118 | 28.62 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 144 | 28.67 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 145 | 28.67 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 146 | 28.67 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 2 |
| 147 | 28.67 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 157 | 28.68 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 24 | 1 |
| 168 | 28.69 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 7 |
| 173 | 28.70 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 176 | 28.71 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 198 | 28.74 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 10 | 3 |
| 205 | 28.74 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 206 | 28.74 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 21 | 13 |
| 229 | 28.76 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 233 | 28.76 | wind | 3.0 | 1440 | < th | dose dependent | rect. | 12 | 1 |
| 238 | 28.76 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 248 | 28.77 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 20 | 10 |
| 256 | 28.77 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 24 | 5 |
| 275 | 28.79 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 20 | 4 |
| 293 | 28.80 | wind | 3.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 330 | 28.81 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 21 | 10 |
| 331 | 28.81 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 12 |
| 342 | 28.82 | wind | 9.0 | 14400 | < th | dose independent | rect. | 5 | 8 |
| 361 | 28.82 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 16 | 10 |
| 374 | 28.83 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 6 |
| 380 | 28.83 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 15 | NA |
| 413 | 28.84 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 20 | 10 |
| 437 | 28.84 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 10 | 19 |
| 442 | 28.85 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 467 | 28.85 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 10 | 17 |
| 469 | 28.85 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 4 | 20 |
| 472 | 28.86 | wind | 3.0 | 1440 | < th | dose independent | rect. | 12 | 1 |
| 478 | 28.86 | temperature | 20.0 | 270 | > th | dose independent | rect. | 21 | 14 |
| 480 | 28.86 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 487 | 28.86 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 22 | 4 |
| 506 | 28.87 | wind | 3.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 508 | 28.87 | wind | 9.0 | 14400 | > th | dose independent | rect. | 4 | 9 |
| 580 | 28.89 | wind | 9.0 | 14400 | > th | dose independent | rect. | 5 | 7 |
| 718 | 28.92 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 727 | 28.92 | wind | 3.0 | 14400 | < th | dose independent | rect. | 21 | 10 |
| 737 | 28.92 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 778 | 28.93 | temperature | 20.0 | 1440 | > th | dose independent | sin | 8 | NA |
| 782 | 28.93 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 21 | 2 |
| 853 | 28.93 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 24 | 23 |
| 854 | 28.94 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 21 | 2 |
| 865 | 28.94 | wind | 9.0 | 14400 | > th | dose independent | rect. | 1 | 12 |
| 868 | 28.94 | temperature | 25.0 | 1440 | < th | dose dependent | no | NA | NA |
| 871 | 28.94 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 21 | 2 |
| 872 | 28.94 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 10 | 3 |
| 936 | 28.95 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 1 | 6 |
| 980 | 28.96 | wind | 3.0 | 1440 | > th | dose independent | rect. | 12 | 1 |