Os07g0510400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : UDP-glucuronosyl/UDP-glucosyltransferase family protein.
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Os07g0510400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : UDP-glucuronosyl/UDP-glucosyltransferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 471.24 | 1.02 | 9.31 | -3.89 | 1.74 | 2.5 | 2.23 | -1.04 | -1.06 | 9.58 | 71.52 | 1150 | -- | -- |
| 470.95 | 1.01 | 9.3 | -3.81 | 1.8 | 2.44 | 2.49 | -- | -1.1 | 9.57 | 74 | 1127 | -- | -- |
| 487.76 | 1.03 | 9.32 | -3.86 | 1.75 | 2.46 | -- | -1.53 | -1.11 | 9.49 | 74.02 | 1149 | -- | -- |
| 491.47 | 1.03 | 9.31 | -3.73 | 1.76 | 2.34 | -- | -- | -1.12 | 9.52 | 74.52 | 1152 | -- | -- |
| 628.58 | 1.17 | 9.38 | -3.73 | -- | 2 | -- | -0.84 | -1.17 | -- | 76.52 | 1459 | -- | -- |
| 593.81 | 1.14 | 9.36 | -3.37 | 1.44 | -- | 2.01 | -- | -1.3 | 8.84 | -- | -- | -- | -- |
| 607.35 | 1.15 | 9.36 | -3.3 | 1.44 | -- | -- | -- | -1.3 | 8.72 | -- | -- | -- | -- |
| 629.61 | 1.17 | 9.37 | -3.65 | -- | 1.93 | -- | -- | -1.16 | -- | 76.77 | 1463 | -- | -- |
| 834.55 | 1.35 | 9.28 | -- | 1.87 | 2.1 | -- | -- | -0.971 | 9.67 | 94 | 1106 | -- | -- |
| 725.06 | 1.26 | 9.39 | -3.3 | -- | -- | -- | -- | -1.28 | -- | -- | -- | -- | -- |
| 895.09 | 1.4 | 9.27 | -- | 1.43 | -- | -- | -- | -0.928 | 8.89 | -- | -- | -- | -- |
| 956.06 | 1.44 | 9.34 | -- | -- | 1.47 | -- | -- | -0.956 | -- | 92 | 1467 | -- | -- |
| 1012.56 | 1.49 | 9.31 | -- | -- | -- | -- | -- | -0.918 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 476.86 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 9 |
| 3 | 478.59 | humidity | 70 | 720 | < th | dose independent | rect. | 17 | 15 |
| 5 | 479.90 | humidity | 70 | 720 | < th | dose independent | rect. | 17 | 3 |
| 16 | 481.21 | humidity | 80 | 720 | < th | dose dependent | rect. | 17 | 5 |
| 48 | 486.98 | humidity | 70 | 720 | < th | dose independent | sin | 12 | NA |
| 51 | 487.68 | radiation | 10 | 1440 | < th | dose independent | rect. | 11 | 7 |
| 53 | 488.27 | radiation | 10 | 1440 | < th | dose independent | rect. | 13 | 5 |
| 55 | 489.22 | humidity | 80 | 720 | < th | dose dependent | rect. | 17 | 15 |
| 57 | 489.61 | radiation | 10 | 1440 | < th | dose independent | rect. | 11 | 16 |
| 58 | 489.62 | radiation | 10 | 1440 | < th | dose independent | rect. | 11 | 13 |
| 61 | 489.67 | radiation | 10 | 1440 | < th | dose independent | rect. | 11 | 11 |
| 64 | 489.76 | radiation | 10 | 1440 | < th | dose independent | rect. | 11 | 9 |
| 67 | 489.78 | humidity | 70 | 1440 | < th | dose dependent | rect. | 15 | 19 |
| 70 | 489.80 | humidity | 70 | 720 | > th | dose independent | rect. | 16 | 16 |
| 80 | 490.65 | radiation | 10 | 1440 | < th | dose independent | rect. | 13 | 14 |
| 82 | 490.67 | radiation | 10 | 1440 | < th | dose independent | rect. | 13 | 11 |
| 85 | 490.73 | radiation | 10 | 1440 | < th | dose independent | rect. | 13 | 9 |
| 88 | 490.80 | humidity | 70 | 720 | > th | dose independent | sin | 12 | NA |
| 93 | 490.93 | radiation | 10 | 1440 | < th | dose independent | sin | 17 | NA |
| 94 | 491.16 | humidity | 70 | 1440 | > th | dose independent | rect. | 17 | 20 |
| 95 | 491.22 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 4 |
| 130 | 492.32 | humidity | 70 | 1440 | < th | dose independent | rect. | 16 | 21 |
| 160 | 493.16 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 169 | 493.36 | humidity | 70 | 1440 | < th | dose dependent | sin | 16 | NA |
| 182 | 493.40 | humidity | 70 | 1440 | < th | dose dependent | sin | 11 | NA |
| 193 | 493.75 | humidity | 70 | 1440 | < th | dose dependent | rect. | 15 | 3 |
| 224 | 494.35 | humidity | 70 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 225 | 494.41 | humidity | 80 | 1440 | < th | dose dependent | rect. | 7 | 14 |
| 295 | 495.02 | humidity | 70 | 1440 | < th | dose dependent | rect. | 9 | 23 |
| 303 | 495.09 | humidity | 70 | 1440 | < th | dose dependent | rect. | 9 | 11 |
| 316 | 495.10 | humidity | 70 | 1440 | < th | dose dependent | rect. | 11 | 9 |
| 341 | 495.21 | radiation | 20 | 4320 | > th | dose dependent | rect. | 16 | 16 |
| 353 | 495.29 | humidity | 70 | 1440 | < th | dose dependent | no | NA | NA |
| 682 | 497.10 | radiation | 20 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 737 | 497.70 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 22 |
| 856 | 499.22 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 22 |
| 875 | 499.46 | radiation | 30 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 889 | 499.64 | radiation | 30 | 4320 | > th | dose independent | rect. | 16 | 16 |
| 952 | 500.43 | humidity | 70 | 1440 | < th | dose independent | rect. | 9 | 23 |
| 962 | 500.70 | radiation | 30 | 4320 | < th | dose independent | rect. | 19 | 13 |
| 963 | 500.71 | humidity | 70 | 1440 | < th | dose independent | rect. | 9 | 11 |
| 988 | 501.04 | radiation | 30 | 4320 | > th | dose independent | rect. | 7 | 1 |