Os07g0510200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycoside hydrolase, family 17 protein.
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Os07g0510200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycoside hydrolase, family 17 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 134.85 | 0.546 | 8.94 | -1.44 | 0.615 | 1.22 | 1.62 | -1.43 | -0.275 | 4.6 | 76.22 | 1221 | -- | -- |
| 137.04 | 0.545 | 8.93 | -1.36 | 0.587 | 1.19 | 1.59 | -- | -0.252 | 4.83 | 76 | 1174 | -- | -- |
| 141.16 | 0.553 | 8.94 | -1.42 | 0.632 | 1.18 | -- | -1.08 | -0.269 | 3.97 | 75.16 | 1229 | -- | -- |
| 142.5 | 0.556 | 8.93 | -1.33 | 0.629 | 1.08 | -- | -- | -0.246 | 3.98 | 75 | 1222 | -- | -- |
| 161.91 | 0.593 | 8.95 | -1.43 | -- | 1.38 | -- | -1.21 | -0.26 | -- | 76.6 | 1210 | -- | -- |
| 163.91 | 0.6 | 8.94 | -1.11 | 0.772 | -- | 1.34 | -- | -0.325 | 3.77 | -- | -- | -- | -- |
| 168.77 | 0.608 | 8.95 | -1.13 | 0.776 | -- | -- | -- | -0.332 | 3.33 | -- | -- | -- | -- |
| 163.62 | 0.596 | 8.93 | -1.34 | -- | 1.27 | -- | -- | -0.244 | -- | 76.41 | 1212 | -- | -- |
| 187.59 | 0.638 | 8.89 | -- | 0.679 | 0.813 | -- | -- | -0.131 | 3.83 | 75.08 | 1226 | -- | -- |
| 202.78 | 0.665 | 8.95 | -1.1 | -- | -- | -- | -- | -0.312 | -- | -- | -- | -- | -- |
| 202.69 | 0.666 | 8.92 | -- | 0.754 | -- | -- | -- | -0.206 | 3.33 | -- | -- | -- | -- |
| 207.88 | 0.672 | 8.91 | -- | -- | 1.07 | -- | -- | -0.178 | -- | 88.03 | 1208 | -- | -- |
| 234.79 | 0.715 | 8.92 | -- | -- | -- | -- | -- | -0.19 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 133.45 | humidity | 70 | 720 | > th | dose independent | sin | 12 | NA |
| 3 | 134.04 | humidity | 80 | 720 | < th | dose dependent | rect. | 17 | 2 |
| 4 | 134.06 | humidity | 70 | 720 | > th | dose independent | rect. | 16 | 15 |
| 6 | 134.26 | humidity | 70 | 720 | < th | dose independent | rect. | 16 | 16 |
| 7 | 134.27 | humidity | 70 | 720 | < th | dose independent | sin | 12 | NA |
| 16 | 135.01 | humidity | 70 | 720 | < th | dose independent | rect. | 16 | 4 |
| 36 | 135.58 | humidity | 70 | 720 | < th | dose independent | rect. | 17 | 2 |
| 88 | 136.94 | humidity | 80 | 720 | < th | dose dependent | rect. | 16 | 16 |
| 103 | 137.33 | humidity | 70 | 1440 | < th | dose dependent | rect. | 15 | 19 |
| 111 | 137.48 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 8 |
| 118 | 137.60 | humidity | 60 | 1440 | > th | dose independent | rect. | 15 | 4 |
| 135 | 137.71 | humidity | 70 | 1440 | < th | dose dependent | sin | 12 | NA |
| 203 | 138.07 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 2 |
| 292 | 138.62 | temperature | 30 | 720 | < th | dose independent | rect. | 16 | 9 |
| 332 | 138.91 | temperature | 30 | 720 | > th | dose independent | rect. | 17 | 2 |
| 503 | 139.49 | temperature | 30 | 720 | < th | dose independent | rect. | 16 | 15 |
| 552 | 139.72 | temperature | 30 | 720 | < th | dose independent | sin | 12 | NA |
| 587 | 139.82 | humidity | 90 | 720 | < th | dose dependent | rect. | 5 | 18 |
| 602 | 139.87 | wind | 7 | 43200 | > th | dose dependent | rect. | 15 | 4 |
| 737 | 140.21 | radiation | 10 | 1440 | < th | dose independent | rect. | 15 | 2 |
| 768 | 140.26 | humidity | 50 | 4320 | > th | dose independent | rect. | 6 | 11 |
| 771 | 140.27 | humidity | 50 | 4320 | > th | dose independent | rect. | 24 | 17 |
| 775 | 140.28 | humidity | 50 | 4320 | > th | dose independent | rect. | 2 | 15 |
| 856 | 140.45 | wind | 7 | 43200 | > th | dose dependent | rect. | 15 | 14 |
| 857 | 140.46 | wind | 9 | 43200 | > th | dose independent | rect. | 15 | 5 |
| 910 | 140.54 | humidity | 60 | 1440 | > th | dose independent | rect. | 6 | 21 |
| 919 | 140.55 | humidity | 60 | 1440 | > th | dose independent | no | NA | NA |
| 931 | 140.55 | humidity | 60 | 1440 | > th | dose independent | rect. | 6 | 19 |
| 941 | 140.55 | humidity | 60 | 1440 | > th | dose independent | rect. | 2 | 23 |