Os07g0507600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1723 domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0507600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF1723 domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27.69 | 0.247 | 11.5 | 1.46 | 0.907 | -1.15 | 0.0298 | 0.842 | 0.349 | 18.9 | 9.534 | 11 | -- | -- |
| 28.25 | 0.249 | 11.5 | 1.34 | 0.906 | -1.14 | 0.0407 | -- | 0.316 | 18.9 | 9.534 | 11 | -- | -- |
| 27.69 | 0.245 | 11.5 | 1.46 | 0.907 | -1.15 | -- | 0.844 | 0.349 | 18.9 | 9.62 | 11 | -- | -- |
| 28.25 | 0.249 | 11.5 | 1.34 | 0.905 | -1.14 | -- | -- | 0.315 | 18.9 | 9.62 | 11 | -- | -- |
| 69.07 | 0.389 | 11.5 | 1.42 | -- | -0.884 | -- | 1.1 | 0.302 | -- | 8.707 | 6 | -- | -- |
| 40.62 | 0.299 | 11.5 | 1.12 | 0.848 | -- | -0.111 | -- | 0.156 | 20.3 | -- | -- | -- | -- |
| 40.66 | 0.299 | 11.5 | 1.12 | 0.848 | -- | -- | -- | 0.156 | 20.3 | -- | -- | -- | -- |
| 70.07 | 0.392 | 11.5 | 1.27 | -- | -0.862 | -- | -- | 0.261 | -- | 8.707 | 6 | -- | -- |
| 71.19 | 0.395 | 11.5 | -- | 0.854 | -0.417 | -- | -- | 0.092 | 19.7 | 19.57 | 22 | -- | -- |
| 80.6 | 0.42 | 11.5 | 1.12 | -- | -- | -- | -- | 0.147 | -- | -- | -- | -- | -- |
| 73.96 | 0.402 | 11.6 | -- | 0.843 | -- | -- | -- | 0.0307 | 20.4 | -- | -- | -- | -- |
| 110.38 | 0.491 | 11.5 | -- | -- | -0.385 | -- | -- | 0.0748 | -- | 18.57 | 2 | -- | -- |
| 113.62 | 0.498 | 11.5 | -- | -- | -- | -- | -- | 0.0227 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 25.17 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 2 | 25.29 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 3 | 25.51 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 4 | 25.51 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 3 |
| 9 | 25.90 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 13 |
| 10 | 25.93 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 6 |
| 12 | 25.96 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 28 | 26.35 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 9 |
| 50 | 26.67 | wind | 9.0 | 43200 | > th | dose independent | rect. | 17 | 12 |
| 55 | 26.71 | wind | 9.0 | 43200 | > th | dose independent | rect. | 17 | 7 |
| 57 | 26.72 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 8 |
| 60 | 26.75 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 9 |
| 71 | 26.86 | wind | 9.0 | 43200 | > th | dose independent | rect. | 17 | 4 |
| 85 | 26.93 | wind | 9.0 | 43200 | < th | dose independent | rect. | 17 | 11 |
| 87 | 26.94 | wind | 9.0 | 43200 | < th | dose independent | rect. | 17 | 4 |
| 93 | 26.99 | wind | 9.0 | 43200 | < th | dose independent | rect. | 17 | 8 |
| 101 | 27.04 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 4 |
| 109 | 27.15 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 118 | 27.22 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 153 | 27.54 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 162 | 27.58 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 15 | 17 |
| 168 | 27.60 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 183 | 27.68 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 6 | 6 |
| 187 | 27.70 | temperature | 10.0 | 10 | > th | dose dependent | no | NA | NA |
| 196 | 27.74 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 200 | 27.75 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 17 | 3 |
| 212 | 27.76 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 221 | 27.77 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 7 |
| 244 | 27.83 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 18 | 8 |
| 254 | 27.85 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 22 | 2 |
| 260 | 27.86 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 17 | 16 |
| 261 | 27.86 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 8 | 6 |
| 265 | 27.87 | temperature | 25.0 | 4320 | > th | dose dependent | sin | 5 | NA |
| 286 | 27.90 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 24 | 14 |
| 381 | 28.01 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 8 | 2 |
| 434 | 28.04 | temperature | 10.0 | 4320 | > th | dose dependent | sin | 22 | NA |
| 460 | 28.06 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 8 | 1 |
| 638 | 28.17 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 8 | 4 |
| 646 | 28.17 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 2 | 10 |
| 680 | 28.17 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 16 | 18 |
| 681 | 28.18 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 7 | 5 |
| 682 | 28.18 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 4 | 8 |
| 687 | 28.18 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 19 | 17 |
| 704 | 28.18 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 6 | 19 |
| 708 | 28.18 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 19 | 23 |
| 736 | 28.20 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 772 | 28.21 | wind | 9.0 | 43200 | > th | dose dependent | sin | 14 | NA |
| 829 | 28.22 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 13 | 23 |
| 852 | 28.24 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 854 | 28.24 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 881 | 28.25 | temperature | 25.0 | 4320 | > th | dose dependent | no | NA | NA |
| 912 | 28.27 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 931 | 28.27 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 940 | 28.28 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 941 | 28.28 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 965 | 28.28 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 11 | 23 |
| 997 | 28.30 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 1 |