Os07g0499300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os07g0499300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 56.96 | 0.355 | 11 | -1.14 | 0.575 | 0.219 | 0.0612 | -1.66 | -0.232 | 17 | 21.19 | 3719 | -- | -- |
| 58.11 | 0.355 | 11 | -0.916 | 0.582 | 0.566 | 0.0809 | -- | -0.273 | 16.8 | 22.63 | 12433 | -- | -- |
| 56.97 | 0.352 | 11 | -1.14 | 0.575 | 0.219 | -- | -1.66 | -0.231 | 16.9 | 21.18 | 3725 | -- | -- |
| 57.87 | 0.354 | 11 | -1.03 | 0.611 | 0.581 | -- | -- | -0.24 | 17.1 | 21.4 | 17179 | -- | -- |
| 74.41 | 0.402 | 11 | -1.16 | -- | 0.248 | -- | -1.6 | -0.255 | -- | 21.13 | 4831 | -- | -- |
| 65.3 | 0.379 | 10.9 | -0.512 | 0.566 | -- | 0.13 | -- | -0.0109 | 17.1 | -- | -- | -- | -- |
| 65.34 | 0.379 | 10.9 | -0.512 | 0.567 | -- | -- | -- | -0.0103 | 17 | -- | -- | -- | -- |
| 74.9 | 0.403 | 11 | -1.08 | -- | 0.623 | -- | -- | -0.261 | -- | 21.39 | 17653 | -- | -- |
| 71.34 | 0.393 | 10.9 | -- | 0.568 | 0.163 | -- | -- | 0.00438 | 16.6 | 26.6 | 7559 | -- | -- |
| 82.23 | 0.424 | 10.9 | -0.532 | -- | -- | -- | -- | -0.0247 | -- | -- | -- | -- | -- |
| 72.23 | 0.398 | 10.9 | -- | 0.576 | -- | -- | -- | 0.0467 | 17 | -- | -- | -- | -- |
| 83.38 | 0.427 | 10.9 | -- | -- | 0.256 | -- | -- | -0.0324 | -- | 26.6 | 7642 | -- | -- |
| 89.69 | 0.442 | 10.9 | -- | -- | -- | -- | -- | 0.0343 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 52.95 | wind | 3.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 2 | 53.11 | wind | 3.0 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 3 | 53.47 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 5 | 54.05 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 7 | 54.63 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 5 |
| 8 | 54.66 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 20 | 15 |
| 10 | 54.68 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 20 | 15 |
| 14 | 54.76 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 8 | 2 |
| 15 | 54.77 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 19 | 13 |
| 16 | 54.83 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 17 | 15 |
| 17 | 54.86 | wind | 1.0 | 14400 | > th | dose independent | rect. | 19 | 14 |
| 21 | 54.88 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 21 | 11 |
| 47 | 55.12 | wind | 1.0 | 14400 | < th | dose dependent | sin | 9 | NA |
| 53 | 55.19 | wind | 1.0 | 14400 | < th | dose independent | rect. | 19 | 14 |
| 59 | 55.22 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 81 | 55.39 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 97 | 55.47 | wind | 1.0 | 14400 | < th | dose independent | rect. | 17 | 16 |
| 99 | 55.48 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 100 | 55.48 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 108 | 55.51 | wind | 1.0 | 14400 | > th | dose independent | sin | 10 | NA |
| 111 | 55.55 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 121 | 55.62 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 125 | 55.64 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 18 | 3 |
| 126 | 55.65 | wind | 1.0 | 14400 | < th | dose independent | sin | 11 | NA |
| 127 | 55.65 | radiation | 40.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 131 | 55.65 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 16 | 5 |
| 144 | 55.65 | radiation | 40.0 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 161 | 55.66 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 20 | 8 |
| 174 | 55.72 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 192 | 55.78 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 14 | 3 |
| 200 | 55.79 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 24 | 12 |
| 215 | 55.84 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 5 |
| 225 | 55.86 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 14 | 1 |
| 230 | 55.87 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 231 | 55.87 | temperature | 10.0 | 43200 | > th | dose independent | rect. | 9 | 5 |
| 232 | 55.87 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 11 | 7 |
| 235 | 55.88 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 236 | 55.88 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 243 | 55.89 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 252 | 55.94 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 5 |
| 265 | 55.97 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 2 | 6 |
| 276 | 55.99 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 5 | 3 |
| 277 | 55.99 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 16 | 5 |
| 285 | 56.00 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 14 | 3 |
| 286 | 56.00 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 4 | 4 |
| 304 | 56.02 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 11 | 6 |
| 346 | 56.09 | wind | 1.0 | 14400 | < th | dose independent | rect. | 20 | 9 |
| 359 | 56.12 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 365 | 56.13 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 3 | 9 |
| 383 | 56.16 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 11 | 4 |
| 460 | 56.29 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 503 | 56.36 | atmosphere | 1010.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 509 | 56.36 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 24 | 5 |
| 511 | 56.36 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 8 | 19 |
| 513 | 56.37 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 1 | 3 |
| 559 | 56.42 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 6 | 2 |
| 575 | 56.44 | atmosphere | 1010.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 583 | 56.44 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 1 | 22 |
| 604 | 56.47 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 3 | 1 |
| 607 | 56.47 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 2 | 6 |
| 622 | 56.49 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 1 | 4 |
| 644 | 56.51 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 12 | 12 |
| 680 | 56.55 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 15 | 9 |
| 685 | 56.56 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 6 | 11 |
| 709 | 56.58 | wind | 3.0 | 14400 | < th | dose independent | rect. | 21 | 2 |
| 728 | 56.60 | wind | 3.0 | 14400 | > th | dose independent | rect. | 21 | 2 |
| 753 | 56.62 | temperature | 20.0 | 14400 | < th | dose independent | sin | 18 | NA |
| 795 | 56.66 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 4 |
| 801 | 56.67 | temperature | 25.0 | 270 | > th | dose independent | rect. | 7 | 4 |
| 831 | 56.69 | wind | 1.0 | 14400 | < th | dose dependent | no | NA | NA |
| 872 | 56.72 | temperature | 20.0 | 14400 | > th | dose independent | sin | 18 | NA |
| 883 | 56.72 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 19 |
| 887 | 56.73 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 6 | 12 |
| 888 | 56.73 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 9 | 3 |
| 893 | 56.74 | wind | 3.0 | 14400 | < th | dose independent | rect. | 21 | 4 |
| 906 | 56.75 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 910 | 56.75 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 20 | 9 |
| 981 | 56.80 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 20 | 11 |