Os07g0498900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF231, plant domain containing protein.
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Os07g0498900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF231, plant domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 31.64 | 0.264 | 9.22 | -0.705 | 0.563 | -1.17 | -0.584 | 0.239 | -0.017 | 20.1 | 29.6 | 98 | -- | -- |
| 31.7 | 0.262 | 9.22 | -0.664 | 0.563 | -1.17 | -0.573 | -- | -0.00644 | 20.1 | 29.5 | 99 | -- | -- |
| 32.64 | 0.266 | 9.22 | -0.68 | 0.561 | -1.18 | -- | 0.158 | -0.0181 | 20.3 | 29.5 | 99 | -- | -- |
| 32.67 | 0.266 | 9.22 | -0.653 | 0.559 | -1.19 | -- | -- | -0.0125 | 20.3 | 29.5 | 99 | -- | -- |
| 45.5 | 0.314 | 9.22 | -0.736 | -- | -1.37 | -- | 0.166 | -0.0634 | -- | 29.63 | 270 | -- | -- |
| 50.65 | 0.334 | 9.17 | -0.365 | 0.739 | -- | -0.57 | -- | 0.229 | 18.2 | -- | -- | -- | -- |
| 51.45 | 0.336 | 9.17 | -0.358 | 0.736 | -- | -- | -- | 0.227 | 18.2 | -- | -- | -- | -- |
| 45.53 | 0.314 | 9.21 | -0.707 | -- | -1.37 | -- | -- | -0.0572 | -- | 29.6 | 267 | -- | -- |
| 42.88 | 0.305 | 9.19 | -- | 0.582 | -0.975 | -- | -- | 0.102 | 20 | 29.6 | 86 | -- | -- |
| 79.58 | 0.417 | 9.15 | -0.379 | -- | -- | -- | -- | 0.211 | -- | -- | -- | -- | -- |
| 54.84 | 0.346 | 9.16 | -- | 0.742 | -- | -- | -- | 0.267 | 18.2 | -- | -- | -- | -- |
| 57.65 | 0.354 | 9.19 | -- | -- | -1.14 | -- | -- | 0.0627 | -- | 29.8 | 264 | -- | -- |
| 83.36 | 0.426 | 9.14 | -- | -- | -- | -- | -- | 0.253 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 27.03 | temperature | 15 | 10 | > th | dose dependent | rect. | 8 | 21 |
| 13 | 29.08 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 15 |
| 27 | 29.88 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 22 |
| 30 | 30.00 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 51 | 30.67 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 20 |
| 66 | 31.03 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 22 |
| 75 | 31.19 | temperature | 15 | 10 | > th | dose dependent | rect. | 8 | 18 |
| 78 | 31.28 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 23 |
| 85 | 31.37 | temperature | 15 | 90 | > th | dose dependent | rect. | 8 | 16 |
| 94 | 31.50 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 113 | 31.75 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 143 | 32.07 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 158 | 32.22 | temperature | 30 | 10 | < th | dose dependent | sin | 0 | NA |
| 161 | 32.25 | temperature | 30 | 90 | < th | dose dependent | sin | 3 | NA |
| 169 | 32.31 | temperature | 30 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 200 | 32.45 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 218 | 32.56 | temperature | 15 | 270 | > th | dose dependent | rect. | 20 | 17 |
| 232 | 32.65 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 250 | 32.77 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 251 | 32.78 | temperature | 10 | 90 | > th | dose dependent | sin | 4 | NA |
| 255 | 32.82 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 256 | 32.83 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 282 | 32.98 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 283 | 32.99 | temperature | 10 | 90 | > th | dose dependent | no | NA | NA |
| 303 | 33.06 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 565 | 34.60 | temperature | 15 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 610 | 34.77 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 18 |
| 630 | 34.85 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 682 | 35.04 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 709 | 35.14 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 739 | 35.26 | temperature | 25 | 90 | < th | dose independent | rect. | 5 | 16 |
| 791 | 35.41 | temperature | 25 | 270 | < th | dose independent | rect. | 2 | 18 |
| 864 | 35.69 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 963 | 35.98 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |