Os07g0496600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : FAR1 domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0496600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : FAR1 domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 23.59 | 0.228 | 11 | 0.943 | 0.47 | -0.197 | -0.273 | 0.419 | 0.0643 | 18.3 | 19.1 | 23 | -- | -- |
| 24.21 | 0.231 | 11 | 0.9 | 0.471 | -0.25 | -0.254 | -- | 0.0536 | 18.3 | 19.1 | 21 | -- | -- |
| 23.7 | 0.228 | 11 | 0.947 | 0.468 | -0.198 | -- | 0.42 | 0.064 | 18.2 | 19.1 | 23 | -- | -- |
| 24.27 | 0.229 | 11 | 0.907 | 0.472 | -0.265 | -- | -- | 0.0549 | 18.2 | 19.1 | 13 | -- | -- |
| 34.99 | 0.276 | 10.9 | 0.93 | -- | -0.192 | -- | 0.478 | 0.0504 | -- | 18.9 | 13 | -- | -- |
| 26 | 0.239 | 11 | 0.823 | 0.465 | -- | -0.341 | -- | 0.0181 | 18.7 | -- | -- | -- | -- |
| 26.28 | 0.24 | 11 | 0.829 | 0.465 | -- | -- | -- | 0.0175 | 18.6 | -- | -- | -- | -- |
| 35.48 | 0.277 | 11 | 0.901 | -- | -0.356 | -- | -- | 0.0298 | -- | 18 | 38 | -- | -- |
| 44.33 | 0.31 | 11 | -- | 0.456 | -0.0386 | -- | -- | -0.0689 | 18.6 | 20.2 | 46 | -- | -- |
| 37.53 | 0.286 | 11 | 0.818 | -- | -- | -- | -- | 0.00805 | -- | -- | -- | -- | -- |
| 44.39 | 0.312 | 11 | -- | 0.454 | -- | -- | -- | -0.0749 | 18.7 | -- | -- | -- | -- |
| 49.14 | 0.328 | 11 | -- | -- | 0.252 | -- | -- | -0.111 | -- | 26.81 | 20 | -- | -- |
| 55.18 | 0.347 | 11 | -- | -- | -- | -- | -- | -0.0827 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 21.91 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 15 | 10 |
| 10 | 22.04 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 14 | 12 |
| 49 | 22.19 | temperature | 25.0 | 10 | < th | dose dependent | sin | 15 | NA |
| 67 | 22.23 | temperature | 20.0 | 10 | < th | dose independent | rect. | 16 | 10 |
| 103 | 22.35 | temperature | 20.0 | 10 | < th | dose independent | sin | 14 | NA |
| 111 | 22.39 | temperature | 20.0 | 10 | < th | dose independent | rect. | 14 | 12 |
| 294 | 22.83 | temperature | 20.0 | 30 | > th | dose independent | sin | 15 | NA |
| 318 | 22.85 | temperature | 20.0 | 30 | > th | dose independent | rect. | 11 | 19 |
| 423 | 22.94 | temperature | 25.0 | 90 | < th | dose independent | rect. | 1 | 12 |
| 432 | 22.95 | radiation | 30.0 | 10 | < th | dose independent | rect. | 23 | 12 |
| 486 | 22.99 | humidity | 60.0 | 720 | > th | dose independent | rect. | 14 | 7 |
| 521 | 23.01 | humidity | 70.0 | 720 | > th | dose independent | rect. | 17 | 2 |
| 530 | 23.01 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 15 | 5 |
| 541 | 23.02 | temperature | 20.0 | 270 | > th | dose independent | rect. | 16 | 11 |
| 542 | 23.02 | temperature | 20.0 | 90 | > th | dose independent | rect. | 17 | 13 |
| 544 | 23.02 | humidity | 60.0 | 720 | > th | dose independent | rect. | 14 | 14 |
| 545 | 23.02 | humidity | 60.0 | 720 | > th | dose independent | rect. | 9 | 19 |
| 547 | 23.02 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 21 | 1 |
| 604 | 23.05 | temperature | 20.0 | 10 | > th | dose independent | rect. | 11 | 17 |
| 660 | 23.08 | humidity | 60.0 | 720 | > th | dose independent | rect. | 11 | 17 |
| 704 | 23.10 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 12 | 3 |
| 720 | 23.11 | temperature | 20.0 | 30 | > th | dose independent | rect. | 11 | 21 |
| 721 | 23.11 | temperature | 20.0 | 30 | > th | dose independent | rect. | 9 | 23 |
| 773 | 23.13 | humidity | 60.0 | 720 | > th | dose independent | rect. | 11 | 10 |
| 775 | 23.13 | humidity | 60.0 | 720 | > th | dose independent | rect. | 9 | 12 |
| 783 | 23.13 | temperature | 20.0 | 30 | > th | dose independent | rect. | 11 | 23 |
| 837 | 23.16 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 12 | 23 |
| 850 | 23.16 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 12 | 23 |
| 858 | 23.17 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 16 | 1 |
| 999 | 23.24 | temperature | 20.0 | 90 | < th | dose independent | rect. | 23 | 2 |