Os07g0495400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to ATP synthase delta' chain, mitochondrial precursor (EC 3.6.3.14).
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Os07g0495400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to ATP synthase delta' chain, mitochondrial precursor (EC 3.6.3.14).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 91.02 | 0.448 | 8.71 | 0.115 | 0.462 | -1.02 | 0.0697 | -0.615 | 0.127 | 21.3 | 21.9 | 874 | -- | -- |
| 91.96 | 0.447 | 8.7 | 0.263 | 0.457 | -0.974 | -0.17 | -- | 0.162 | 21.1 | 22 | 859 | -- | -- |
| 91.03 | 0.444 | 8.71 | 0.121 | 0.464 | -1.01 | -- | -0.583 | 0.129 | 21.2 | 21.88 | 865 | -- | -- |
| 92.05 | 0.447 | 8.69 | 0.272 | 0.46 | -0.978 | -- | -- | 0.169 | 21.2 | 21.96 | 859 | -- | -- |
| 101.34 | 0.469 | 8.7 | 0.0825 | -- | -0.962 | -- | -0.688 | 0.11 | -- | 21.83 | 1152 | -- | -- |
| 129.6 | 0.534 | 8.76 | -0.0757 | 0.287 | -- | -0.407 | -- | -0.138 | 19.8 | -- | -- | -- | -- |
| 129.98 | 0.534 | 8.76 | -0.0667 | 0.287 | -- | -- | -- | -0.14 | 20.4 | -- | -- | -- | -- |
| 102.38 | 0.471 | 8.69 | 0.278 | -- | -0.929 | -- | -- | 0.154 | -- | 21.96 | 1149 | -- | -- |
| 93.74 | 0.451 | 8.7 | -- | 0.446 | -0.884 | -- | -- | 0.133 | 21.3 | 22.24 | 856 | -- | -- |
| 134.56 | 0.542 | 8.75 | -0.0683 | -- | -- | -- | -- | -0.143 | -- | -- | -- | -- | -- |
| 130.09 | 0.534 | 8.76 | -- | 0.287 | -- | -- | -- | -0.132 | 20.4 | -- | -- | -- | -- |
| 103.95 | 0.475 | 8.7 | -- | -- | -0.816 | -- | -- | 0.111 | -- | 22.21 | 1041 | -- | -- |
| 134.69 | 0.542 | 8.75 | -- | -- | -- | -- | -- | -0.135 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 84.45 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 8 | 87.87 | temperature | 10.0 | 270 | > th | dose dependent | sin | 6 | NA |
| 16 | 88.90 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 23 | 20 |
| 25 | 89.56 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 19 | 23 |
| 26 | 89.60 | temperature | 30.0 | 270 | < th | dose dependent | sin | 6 | NA |
| 51 | 91.42 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 23 | 12 |
| 57 | 91.55 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 23 | 14 |
| 70 | 91.76 | temperature | 10.0 | 10 | > th | dose dependent | sin | 3 | NA |
| 99 | 92.47 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 23 | 17 |
| 124 | 93.26 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 2 | 12 |
| 144 | 93.71 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 21 | 19 |
| 190 | 94.66 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 214 | 95.12 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 23 | 19 |
| 235 | 95.47 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 17 | 19 |
| 270 | 95.92 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 300 | 96.34 | temperature | 10.0 | 10 | > th | dose dependent | no | NA | NA |
| 305 | 96.42 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 4 | 23 |
| 316 | 96.55 | temperature | 25.0 | 720 | < th | dose dependent | sin | 10 | NA |
| 355 | 96.89 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 10 |
| 390 | 97.08 | temperature | 25.0 | 720 | < th | dose dependent | no | NA | NA |
| 400 | 97.10 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 427 | 97.27 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 9 | 23 |
| 438 | 97.30 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 11 | 23 |
| 449 | 97.36 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 23 | 8 |
| 458 | 97.41 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 461 | 97.44 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 23 | 8 |
| 491 | 97.62 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 4 | 23 |
| 492 | 97.62 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 526 | 97.73 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 539 | 97.80 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 586 | 98.03 | temperature | 20.0 | 720 | > th | dose independent | rect. | 19 | 12 |
| 588 | 98.03 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 4 | 12 |
| 612 | 98.13 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 1 | 6 |
| 639 | 98.24 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 655 | 98.33 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 694 | 98.51 | temperature | 30.0 | 10 | < th | dose dependent | no | NA | NA |
| 695 | 98.52 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 737 | 98.69 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 8 | 23 |
| 740 | 98.70 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 850 | 99.23 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 855 | 99.25 | temperature | 20.0 | 720 | > th | dose independent | rect. | 19 | 21 |
| 857 | 99.25 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 863 | 99.27 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 3 |
| 878 | 99.31 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 934 | 99.50 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 938 | 99.50 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 24 | 20 |
| 959 | 99.58 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 3 | 17 |
| 972 | 99.60 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 3 | 23 |