Os07g0494900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0494900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 18.8 | 0.204 | 11.2 | -0.758 | 0.429 | -0.645 | -0.303 | -0.53 | -0.196 | 7.42 | 28.27 | 228 | -- | -- |
| 19.17 | 0.204 | 11.2 | -0.842 | 0.447 | -0.64 | -0.295 | -- | -0.214 | 7.53 | 29.25 | 252 | -- | -- |
| 19.04 | 0.203 | 11.2 | -0.756 | 0.427 | -0.647 | -- | -0.597 | -0.191 | 7.49 | 28.22 | 237 | -- | -- |
| 19.48 | 0.206 | 11.2 | -0.852 | 0.443 | -0.64 | -- | -- | -0.209 | 7.47 | 29.94 | 250 | -- | -- |
| 25.6 | 0.237 | 11.2 | -0.741 | -- | -0.546 | -- | -0.455 | -0.17 | -- | 28.22 | 237 | -- | -- |
| 24.88 | 0.234 | 11.2 | -0.688 | 0.343 | -- | -0.218 | -- | -0.0829 | 9 | -- | -- | -- | -- |
| 25.04 | 0.234 | 11.2 | -0.695 | 0.342 | -- | -- | -- | -0.0826 | 9.16 | -- | -- | -- | -- |
| 25.93 | 0.238 | 11.2 | -0.818 | -- | -0.539 | -- | -- | -0.19 | -- | 28.22 | 237 | -- | -- |
| 36.48 | 0.283 | 11.2 | -- | 0.33 | -0.346 | -- | -- | -0.0465 | 8.21 | 74.55 | 29 | -- | -- |
| 31.82 | 0.264 | 11.2 | -0.696 | -- | -- | -- | -- | -0.0809 | -- | -- | -- | -- | -- |
| 37.75 | 0.287 | 11.2 | -- | 0.342 | -- | -- | -- | -0.00527 | 9.31 | -- | -- | -- | -- |
| 42.47 | 0.305 | 11.2 | -- | -- | -0.376 | -- | -- | -0.0458 | -- | 53.04 | 9 | -- | -- |
| 44.59 | 0.312 | 11.2 | -- | -- | -- | -- | -- | -0.00368 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 18.32 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 16 | 22 |
| 3 | 18.34 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 14 |
| 7 | 18.46 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 8 | 18.47 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 21 | 22 |
| 9 | 18.50 | temperature | 30.0 | 270 | < th | dose dependent | sin | 9 | NA |
| 14 | 18.58 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 9 | 22 |
| 15 | 18.59 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 4 |
| 21 | 18.61 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 23 | 18.61 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 7 |
| 26 | 18.62 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 7 |
| 35 | 18.67 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 37 | 18.69 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 42 | 18.71 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 19 | 2 |
| 45 | 18.72 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 48 | 18.73 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 50 | 18.73 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 52 | 18.73 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 11 |
| 53 | 18.74 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 54 | 18.74 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 56 | 18.77 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 19 | 7 |
| 58 | 18.78 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 62 | 18.79 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 19 | 7 |
| 66 | 18.80 | temperature | 10.0 | 270 | > th | dose dependent | sin | 9 | NA |
| 72 | 18.81 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 5 |
| 81 | 18.83 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 89 | 18.85 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 5 |
| 90 | 18.85 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 7 |
| 92 | 18.85 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 5 |
| 94 | 18.86 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 19 | 5 |
| 99 | 18.87 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 117 | 18.90 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 7 |
| 133 | 18.93 | temperature | 30.0 | 270 | < th | dose dependent | no | NA | NA |
| 137 | 18.94 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 15 | 15 |
| 140 | 18.94 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 146 | 18.95 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 15 | 4 |
| 154 | 18.96 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 15 | 2 |
| 162 | 18.96 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 15 | 12 |
| 172 | 18.97 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 190 | 18.99 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 196 | 18.99 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 17 | 23 |
| 198 | 19.00 | radiation | 30.0 | 4320 | > th | dose independent | rect. | 15 | 17 |
| 227 | 19.03 | temperature | 25.0 | 4320 | < th | dose independent | sin | 13 | NA |
| 259 | 19.05 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 11 | 2 |
| 267 | 19.05 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 269 | 19.06 | temperature | 25.0 | 4320 | > th | dose independent | sin | 13 | NA |
| 282 | 19.06 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 285 | 19.07 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 302 | 19.07 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 310 | 19.08 | temperature | 15.0 | 10 | > th | dose dependent | no | NA | NA |
| 323 | 19.08 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 7 | 23 |
| 324 | 19.08 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 330 | 19.09 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 11 |
| 382 | 19.12 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 6 |
| 395 | 19.12 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 400 | 19.13 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 409 | 19.14 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 419 | 19.14 | wind | 9.0 | 43200 | > th | dose independent | rect. | 17 | 15 |
| 438 | 19.14 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 467 | 19.16 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 9 |
| 470 | 19.16 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 13 |
| 472 | 19.16 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 492 | 19.17 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 559 | 19.20 | radiation | 30.0 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 618 | 19.22 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 11 |
| 669 | 19.23 | temperature | 20.0 | 4320 | > th | dose dependent | sin | 13 | NA |
| 716 | 19.24 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 763 | 19.26 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 18 | 17 |
| 768 | 19.26 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 810 | 19.28 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 15 | 16 |
| 825 | 19.29 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 15 | 1 |
| 826 | 19.29 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 5 | 2 |
| 917 | 19.32 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 13 |
| 954 | 19.33 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 991 | 19.34 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 21 | 13 |
| 999 | 19.34 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 1 | 23 |