Os07g0492300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0492300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 124.66 | 0.525 | 5.18 | 0.787 | 0.327 | -0.627 | 0.117 | -0.862 | 0.357 | 21.5 | 69 | 1381 | -- | -- |
| 125.32 | 0.521 | 5.17 | 0.893 | 0.453 | -0.699 | 0.141 | -- | 0.367 | 21.9 | 68.63 | 1190 | -- | -- |
| 124.56 | 0.52 | 5.18 | 0.783 | 0.342 | -0.635 | -- | -0.873 | 0.357 | 21.7 | 68.92 | 1347 | -- | -- |
| 125.31 | 0.521 | 5.17 | 0.888 | 0.449 | -0.735 | -- | -- | 0.379 | 22 | 68.64 | 1183 | -- | -- |
| 130.84 | 0.533 | 5.17 | 0.775 | -- | -0.605 | -- | -0.793 | 0.352 | -- | 68.95 | 1418 | -- | -- |
| 144.54 | 0.564 | 5.16 | 0.737 | 0.313 | -- | 0.0177 | -- | 0.379 | 20.6 | -- | -- | -- | -- |
| 144.54 | 0.563 | 5.16 | 0.737 | 0.313 | -- | -- | -- | 0.379 | 20.6 | -- | -- | -- | -- |
| 132.22 | 0.536 | 5.16 | 0.882 | -- | -0.655 | -- | -- | 0.377 | -- | 69 | 1428 | -- | -- |
| 146.08 | 0.563 | 5.17 | -- | 0.403 | -0.582 | -- | -- | 0.367 | 22 | 69 | 1190 | -- | -- |
| 150.04 | 0.572 | 5.15 | 0.736 | -- | -- | -- | -- | 0.376 | -- | -- | -- | -- | -- |
| 158.84 | 0.59 | 5.18 | -- | 0.311 | -- | -- | -- | 0.297 | 20.7 | -- | -- | -- | -- |
| 152.04 | 0.574 | 5.16 | -- | -- | -0.782 | -- | -- | 0.354 | -- | 75 | 1439 | -- | -- |
| 164.32 | 0.598 | 5.17 | -- | -- | -- | -- | -- | 0.294 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 120.86 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 5 |
| 2 | 121.07 | humidity | 70 | 1440 | > th | dose independent | rect. | 10 | 3 |
| 4 | 121.32 | humidity | 70 | 1440 | < th | dose independent | rect. | 9 | 5 |
| 6 | 121.68 | humidity | 70 | 1440 | < th | dose independent | rect. | 10 | 3 |
| 10 | 121.98 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 12 | 122.27 | humidity | 70 | 1440 | > th | dose independent | rect. | 19 | 19 |
| 15 | 122.48 | humidity | 70 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 16 | 122.49 | humidity | 70 | 1440 | < th | dose independent | rect. | 19 | 19 |
| 17 | 122.51 | humidity | 70 | 1440 | > th | dose independent | rect. | 6 | 8 |
| 19 | 122.52 | humidity | 70 | 1440 | > th | dose independent | rect. | 24 | 14 |
| 26 | 122.54 | humidity | 70 | 1440 | > th | dose independent | rect. | 2 | 12 |
| 33 | 122.79 | radiation | 20 | 1440 | < th | dose dependent | rect. | 7 | 4 |
| 34 | 122.83 | radiation | 20 | 1440 | < th | dose dependent | rect. | 9 | 1 |
| 39 | 122.95 | humidity | 70 | 1440 | < th | dose independent | rect. | 6 | 8 |
| 64 | 123.04 | wind | 1 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 100 | 123.56 | humidity | 90 | 1440 | < th | dose dependent | rect. | 22 | 16 |
| 137 | 123.76 | humidity | 90 | 1440 | < th | dose dependent | sin | 5 | NA |
| 138 | 123.77 | radiation | 10 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 142 | 123.83 | humidity | 70 | 1440 | > th | dose independent | sin | 4 | NA |
| 147 | 123.85 | radiation | 20 | 1440 | < th | dose dependent | rect. | 24 | 11 |
| 157 | 123.88 | radiation | 20 | 1440 | < th | dose dependent | rect. | 2 | 9 |
| 163 | 123.90 | radiation | 10 | 1440 | > th | dose independent | rect. | 8 | 3 |
| 182 | 124.04 | radiation | 10 | 1440 | < th | dose independent | rect. | 7 | 4 |
| 198 | 124.09 | humidity | 80 | 1440 | < th | dose independent | sin | 4 | NA |
| 233 | 124.31 | radiation | 20 | 1440 | < th | dose independent | rect. | 9 | 1 |
| 258 | 124.46 | humidity | 60 | 1440 | > th | dose dependent | rect. | 5 | 9 |
| 260 | 124.48 | wind | 9 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 266 | 124.51 | wind | 5 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 267 | 124.51 | humidity | 70 | 1440 | > th | dose dependent | rect. | 7 | 7 |
| 269 | 124.52 | wind | 1 | 43200 | > th | dose independent | rect. | 22 | 9 |
| 277 | 124.54 | humidity | 60 | 1440 | > th | dose dependent | rect. | 9 | 5 |
| 287 | 124.60 | humidity | 60 | 1440 | > th | dose dependent | rect. | 3 | 12 |
| 295 | 124.63 | radiation | 10 | 1440 | < th | dose independent | rect. | 24 | 11 |
| 306 | 124.65 | radiation | 10 | 1440 | < th | dose independent | rect. | 2 | 9 |
| 309 | 124.65 | radiation | 10 | 1440 | < th | dose independent | rect. | 18 | 17 |
| 370 | 124.81 | wind | 1 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 445 | 124.96 | radiation | 1 | 1440 | > th | dose dependent | rect. | 9 | 1 |
| 452 | 124.97 | humidity | 50 | 1440 | > th | dose dependent | sin | 4 | NA |
| 457 | 124.99 | radiation | 1 | 1440 | > th | dose dependent | rect. | 7 | 3 |
| 467 | 125.03 | wind | 1 | 43200 | < th | dose independent | rect. | 22 | 8 |
| 529 | 125.16 | radiation | 20 | 1440 | < th | dose dependent | sin | 8 | NA |
| 676 | 125.49 | humidity | 70 | 1440 | < th | dose independent | rect. | 9 | 11 |
| 840 | 125.73 | radiation | 20 | 1440 | < th | dose independent | sin | 8 | NA |
| 876 | 125.79 | radiation | 20 | 1440 | < th | dose independent | rect. | 6 | 8 |
| 877 | 125.79 | radiation | 20 | 1440 | < th | dose independent | rect. | 17 | 21 |
| 880 | 125.80 | radiation | 20 | 1440 | < th | dose independent | rect. | 24 | 14 |
| 893 | 125.82 | radiation | 20 | 1440 | < th | dose independent | rect. | 2 | 12 |
| 939 | 125.90 | humidity | 70 | 1440 | < th | dose independent | rect. | 15 | 23 |
| 941 | 125.91 | humidity | 70 | 1440 | < th | dose independent | no | NA | NA |