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Os07g0491900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : FAD dependent oxidoreductase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.1 (0.0317) R2 : 0.774
β1 : -1.52 (0.116) R2dD : 0.0879 R2D : 0.0244
β2 : 3.23 (0.0984) R2dC : 0.829 R2C : 0.496
β3 : -1.43 (0.151) R2dE : 0.0683 R2E : -0.243
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -1.1 (0.0676) R2dN8 : 0.178 R2N8 : 0.0753
σ : 0.591
deviance : 161.08
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C
peak time of C : 8.65
E
wheather : humidity
threshold : 54
memory length : 893
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
153.68 0.582 11.1 -1.51 3.3 -1.46 1.75 -0.757 -1.09 8.59 54.18 852 -- --
154.19 0.578 11.1 -1.56 3.27 -1.47 1.42 -- -1.09 8.64 53.24 876 -- --
160.5 0.59 11.1 -1.57 3.26 -1.45 -- 0.684 -1.11 8.61 52 868 -- --
161.08 0.591 11.1 -1.52 3.23 -1.43 -- -- -1.1 8.65 54 893 -- --
569.35 1.11 11.2 -1.45 -- -1.17 -- 0.735 -1.15 -- 65.84 1431 -- --
185.99 0.639 11.1 -1.49 2.7 -- 1.24 -- -1.06 8.42 -- -- -- --
190.85 0.647 11.1 -1.46 2.7 -- -- -- -1.06 8.41 -- -- -- --
568.33 1.11 11.2 -1.45 -- -1.25 -- -- -1.16 -- 66.41 1437 -- --
219.76 0.694 11.1 -- 2.81 -1.15 -- -- -0.966 7.29 62 911 -- --
595.95 1.14 11.2 -1.44 -- -- -- -- -1.03 -- -- -- -- --
246.77 0.735 11.1 -- 2.69 -- -- -- -0.9 8.45 -- -- -- --
536.59 1.08 11.2 -- -- 2.11 -- -- -0.851 -- 23.64 650 -- --
650.82 1.19 11.2 -- -- -- -- -- -0.875 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 150.33 humidity 80 1440 < th dose independent rect. 8 7
4 151.02 humidity 80 1440 > th dose independent rect. 7 9
5 151.22 humidity 80 1440 > th dose independent rect. 8 7
20 152.12 humidity 50 720 > th dose dependent rect. 7 21
35 152.91 humidity 50 720 > th dose dependent rect. 9 19
39 152.97 humidity 80 1440 < th dose independent rect. 11 3
51 153.34 humidity 80 1440 > th dose independent rect. 11 3
57 153.46 humidity 70 1440 > th dose dependent rect. 11 3
58 153.46 humidity 50 720 > th dose dependent rect. 7 14
59 153.51 humidity 50 720 > th dose dependent rect. 11 17
65 153.62 humidity 50 720 > th dose dependent rect. 22 23
70 153.72 humidity 50 720 > th dose dependent rect. 22 21
74 153.80 humidity 50 720 > th dose dependent rect. 7 12
77 153.83 humidity 50 720 > th dose dependent rect. 5 23
81 153.93 humidity 80 1440 < th dose independent sin 2 NA
82 153.94 humidity 80 1440 > th dose independent sin 1 NA
89 154.05 humidity 50 720 > th dose dependent rect. 7 16
93 154.10 humidity 50 720 > th dose dependent rect. 11 8
100 154.21 humidity 50 720 > th dose dependent rect. 9 10
104 154.27 humidity 50 720 > th dose dependent rect. 24 19
109 154.42 humidity 50 720 > th dose dependent rect. 20 23
110 154.45 humidity 50 720 > th dose dependent rect. 24 23
115 154.53 humidity 50 720 > th dose dependent rect. 24 21
126 154.66 humidity 50 720 > th dose dependent sin 21 NA
131 154.71 humidity 50 720 > th dose dependent rect. 11 23
143 154.91 humidity 70 1440 > th dose dependent rect. 9 6
161 155.09 humidity 50 720 > th dose dependent rect. 9 12
170 155.25 humidity 90 720 < th dose dependent rect. 10 8
172 155.26 humidity 90 720 < th dose dependent rect. 10 15
175 155.29 humidity 50 720 > th dose dependent no NA NA
193 155.46 humidity 90 720 < th dose dependent rect. 10 12
200 155.50 humidity 50 720 > th dose dependent rect. 18 23
201 155.51 humidity 90 720 < th dose dependent sin 21 NA
229 155.72 humidity 50 720 > th dose dependent rect. 3 23
242 155.78 humidity 50 720 > th dose dependent rect. 14 23
281 156.06 humidity 90 720 < th dose dependent rect. 10 23
285 156.09 humidity 90 720 < th dose dependent rect. 6 19
294 156.16 humidity 50 720 > th dose dependent rect. 11 6
303 156.20 humidity 90 720 < th dose dependent rect. 8 17
309 156.23 humidity 90 720 < th dose dependent rect. 6 16
314 156.25 humidity 50 720 > th dose dependent rect. 3 16
319 156.27 humidity 90 1440 < th dose dependent rect. 11 3
396 156.52 humidity 90 720 < th dose dependent rect. 19 23
487 156.95 radiation 1 1440 < th dose dependent rect. 7 10
499 156.99 humidity 90 720 < th dose dependent rect. 23 23
532 157.14 humidity 90 720 < th dose dependent rect. 8 23
593 157.34 radiation 10 1440 > th dose independent rect. 11 1
611 157.41 humidity 90 720 < th dose dependent no NA NA
702 157.72 radiation 10 1440 < th dose dependent rect. 9 9
751 157.83 humidity 60 10 > th dose dependent rect. 13 23
773 157.91 radiation 10 1440 < th dose dependent rect. 9 15
783 157.94 radiation 10 1440 < th dose dependent rect. 9 7
784 157.94 radiation 10 1440 < th dose dependent rect. 9 13
785 157.95 radiation 10 1440 < th dose dependent rect. 9 11
791 157.97 humidity 50 720 > th dose dependent rect. 15 2
807 158.00 radiation 10 1440 < th dose dependent rect. 9 18
877 158.15 humidity 70 10 > th dose dependent rect. 7 23