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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os07g0491800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Cytochrome P450 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.26 (0.0543) R2 : 0.318
β1 : 0.298 (0.224) R2dD : 0.00367 R2D : -0.00748
β2 : 0.76 (0.143) R2dC : 0.0516 R2C : 0.0857
β3 : 1.2 (0.224) R2dE : 0.0568 R2E : 0.112
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -9.14 (1.66) R2dD*E : 0.0623 R2D*E : 0.0871
γ1 : 0.562 (0.125) R2dN8 : 0.0497 R2N8 : 0.0774
σ : 0.991
deviance : 452.54
__
_____
C
peak time of C : 9.51
E
wheather : temperature
threshold : 25.09
memory length : 262
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 6.4
open length of G : 0.791

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
449.64 0.996 3.26 0.227 0.76 1.22 0.908 -9.78 0.551 9.44 25.07 261 6.39 0.816
470.09 1.01 3.25 0.905 0.851 1.31 0.501 -- 0.672 9.64 24.7 187 6.25 0.569
452.54 0.991 3.26 0.298 0.76 1.2 -- -9.14 0.562 9.51 25.09 262 6.4 0.791
470.92 1.01 3.25 0.929 0.848 1.31 -- -- 0.677 9.74 24.64 178 6.24 0.576
479.03 1.02 3.31 0.277 -- 1.54 -- -8.29 0.446 -- 25 269 6.5 0.612
506.54 1.06 3.18 0.927 1.14 -- 0.264 -- 0.953 9.13 -- -- -- --
506.78 1.05 3.18 0.936 1.14 -- -- -- 0.953 9.12 -- -- -- --
471.9 1.01 3.29 0.591 -- 1.43 -- -- 0.58 -- 24.3 405 5.85 1.16
493.67 1.03 3.28 -- 0.844 1.32 -- -- 0.572 9.66 24.51 179 6.27 0.467
581.65 1.13 3.21 0.933 -- -- -- -- 0.96 -- -- -- -- --
529.88 1.08 3.2 -- 1.14 -- -- -- 0.849 9.06 -- -- -- --
482.51 1.02 3.35 -- -- 1.67 -- -- 0.479 -- 24.31 418 5.85 0.567
604.62 1.15 3.24 -- -- -- -- -- 0.856 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 459.70 temperature 25.0 270 > th dose independent rect. 6 1
2 465.39 temperature 25.0 270 > th dose independent rect. 5 3
4 466.99 temperature 25.0 10 > th dose independent rect. 6 5
7 467.73 temperature 25.0 270 > th dose dependent rect. 3 5
18 469.66 temperature 30.0 90 > th dose independent rect. 10 1
22 470.83 humidity 80.0 10 > th dose independent rect. 6 7
24 470.95 atmosphere 1005.0 30 > th dose dependent rect. 6 3
25 471.51 temperature 25.0 30 > th dose independent rect. 6 3
51 474.93 temperature 25.0 10 > th dose dependent rect. 2 9
55 475.05 atmosphere 1000.0 30 > th dose dependent rect. 6 5
56 475.10 radiation 20.0 10 < th dose independent rect. 6 3
66 475.80 temperature 20.0 30 > th dose independent rect. 9 21
71 476.13 temperature 20.0 30 > th dose dependent rect. 6 3
80 476.67 atmosphere 1000.0 30 > th dose independent rect. 6 3
106 477.39 radiation 40.0 10 < th dose dependent rect. 6 5
110 477.61 atmosphere 1000.0 10 > th dose independent rect. 6 10
113 477.95 humidity 70.0 30 > th dose dependent rect. 6 6
119 478.32 temperature 25.0 270 > th dose independent rect. 11 16
121 478.42 temperature 25.0 270 > th dose independent rect. 22 5
125 478.54 temperature 30.0 90 > th dose dependent rect. 10 1
127 478.60 radiation 30.0 10 < th dose independent rect. 6 5
128 478.75 temperature 25.0 10 > th dose dependent rect. 21 14
134 478.85 radiation 30.0 10 < th dose dependent rect. 6 3
141 479.16 atmosphere 1000.0 30 > th dose independent rect. 6 14
157 479.52 temperature 25.0 270 > th dose independent rect. 16 11
165 479.65 atmosphere 1000.0 30 > th dose independent rect. 6 5
170 479.83 temperature 15.0 30 > th dose dependent rect. 20 10
202 480.36 atmosphere 1000.0 10 > th dose independent rect. 6 16
208 480.53 humidity 90.0 30 < th dose independent rect. 6 3
213 480.58 temperature 25.0 270 > th dose independent rect. 18 9
225 480.76 wind 9.0 4320 > th dose dependent rect. 13 1
227 480.79 radiation 40.0 10 < th dose independent rect. 6 18
228 480.80 temperature 30.0 270 > th dose dependent rect. 8 1
253 481.01 temperature 20.0 720 > th dose independent rect. 11 8
258 481.04 temperature 30.0 270 > th dose independent rect. 8 1
272 481.09 temperature 25.0 270 > th dose independent sin 15 NA
284 481.23 wind 3.0 30 < th dose independent rect. 6 14
299 481.51 temperature 25.0 270 < th dose independent sin 15 NA
300 481.52 temperature 30.0 10 > th dose independent rect. 14 1
305 481.56 temperature 15.0 10 > th dose dependent rect. 22 8
307 481.58 wind 7.0 720 > th dose independent rect. 11 3
308 481.58 temperature 20.0 30 > th dose independent rect. 11 19
318 481.65 humidity 70.0 30 > th dose dependent rect. 6 4
324 481.69 wind 5.0 30 < th dose independent rect. 6 3
325 481.69 wind 3.0 30 < th dose independent rect. 6 10
326 481.69 wind 3.0 30 < th dose independent rect. 6 12
335 481.82 wind 3.0 30 < th dose independent rect. 6 8
366 482.29 temperature 25.0 270 < th dose independent rect. 14 11
367 482.35 atmosphere 1000.0 30 > th dose independent rect. 3 23
371 482.38 temperature 25.0 270 < th dose independent rect. 12 13
372 482.38 temperature 10.0 30 > th dose dependent rect. 9 21
373 482.41 atmosphere 1000.0 10 > th dose independent rect. 6 18
376 482.42 radiation 40.0 10 < th dose independent rect. 6 20
377 482.44 temperature 25.0 270 > th dose independent rect. 24 1
378 482.45 atmosphere 1000.0 10 > th dose independent rect. 6 8
380 482.50 wind 3.0 30 < th dose independent rect. 6 5
382 482.52 radiation 40.0 10 < th dose independent rect. 6 22
390 482.64 temperature 20.0 30 > th dose independent rect. 7 23
391 482.64 wind 7.0 30 < th dose dependent rect. 6 3
403 482.80 wind 1.0 90 < th dose dependent rect. 13 2
411 482.88 radiation 40.0 10 < th dose independent rect. 6 10
416 482.90 temperature 25.0 270 > th dose dependent rect. 22 6
420 482.92 temperature 25.0 4320 > th dose dependent rect. 3 4
442 483.18 atmosphere 995.0 30 > th dose dependent rect. 6 14
447 483.21 radiation 10.0 90 < th dose independent rect. 6 1
462 483.29 temperature 20.0 30 > th dose independent rect. 20 10
473 483.42 humidity 90.0 10 < th dose dependent rect. 6 1
484 483.50 wind 7.0 1440 < th dose independent rect. 12 2
491 483.54 wind 5.0 720 > th dose dependent rect. 11 3
494 483.57 wind 1.0 30 > th dose independent rect. 6 3
495 483.57 radiation 40.0 10 < th dose independent rect. 6 8
498 483.60 temperature 10.0 1440 > th dose independent rect. 7 3
501 483.60 atmosphere 995.0 1440 > th dose independent rect. 7 3
502 483.60 atmosphere 1015.0 1440 < th dose independent rect. 7 3
503 483.60 temperature 10.0 1440 > th dose independent rect. 10 21
507 483.61 atmosphere 1005.0 270 > th dose independent rect. 6 1
519 483.69 temperature 30.0 10 < th dose independent rect. 11 19
527 483.74 wind 9.0 30 < th dose independent rect. 9 21
528 483.75 radiation 1.0 30 > th dose independent rect. 6 3
542 483.93 atmosphere 995.0 10 > th dose dependent rect. 6 10
552 483.98 wind 7.0 30 < th dose dependent rect. 6 5
557 484.06 precipitation 0.1 30 < th dose independent rect. 6 3
558 484.06 precipitation 0.1 30 < th dose dependent rect. 6 3
560 484.08 temperature 10.0 30 > th dose independent rect. 6 3
562 484.08 temperature 30.0 30 < th dose independent rect. 6 3
563 484.08 humidity 50.0 30 > th dose independent rect. 6 3
566 484.08 atmosphere 1015.0 30 < th dose independent rect. 6 3
568 484.08 temperature 10.0 30 > th dose independent rect. 9 21
584 484.24 humidity 50.0 30 > th dose dependent rect. 6 3
595 484.33 temperature 25.0 4320 > th dose independent rect. 3 4
612 484.49 temperature 25.0 10 > th dose dependent sin 7 NA
617 484.52 humidity 90.0 10 < th dose independent rect. 6 1
618 484.52 temperature 25.0 270 > th dose dependent rect. 24 1
621 484.54 atmosphere 1000.0 270 > th dose independent rect. 3 6
622 484.55 atmosphere 1000.0 30 > th dose independent rect. 7 23
623 484.56 temperature 25.0 270 < th dose independent rect. 15 16
638 484.65 temperature 25.0 270 < th dose independent rect. 12 19
642 484.67 wind 9.0 720 < th dose independent rect. 11 8
669 484.83 wind 9.0 30 < th dose independent rect. 7 23
678 484.89 atmosphere 1000.0 270 > th dose independent rect. 3 8
679 484.89 atmosphere 995.0 30 > th dose independent rect. 9 21
682 484.90 wind 1.0 10 > th dose independent rect. 19 14
684 484.91 temperature 20.0 720 > th dose dependent rect. 3 1
686 484.94 atmosphere 1005.0 10 > th dose independent rect. 6 1
689 484.96 atmosphere 995.0 10 > th dose dependent rect. 6 16
690 484.97 temperature 30.0 720 > th dose independent rect. 13 1
693 484.97 atmosphere 1015.0 30 < th dose independent rect. 9 21
695 484.99 temperature 20.0 270 < th dose independent rect. 10 9
700 485.01 temperature 20.0 270 < th dose dependent rect. 12 7
704 485.02 wind 7.0 30 < th dose dependent rect. 6 10
711 485.06 temperature 20.0 270 < th dose independent rect. 17 2
715 485.06 temperature 20.0 270 < th dose dependent rect. 17 2
750 485.18 radiation 20.0 90 < th dose dependent rect. 6 1
759 485.23 wind 9.0 1440 < th dose independent rect. 7 1
760 485.23 temperature 10.0 1440 > th dose independent rect. 7 1
764 485.23 temperature 30.0 1440 < th dose independent rect. 7 1
768 485.23 humidity 50.0 1440 > th dose independent rect. 7 1
773 485.23 atmosphere 995.0 1440 > th dose independent rect. 7 1
774 485.23 atmosphere 1015.0 1440 < th dose independent rect. 7 1
776 485.23 temperature 10.0 1440 > th dose independent rect. 8 23
785 485.30 temperature 25.0 4320 < th dose independent rect. 3 4
794 485.40 radiation 40.0 10 < th dose independent rect. 6 16
814 485.52 atmosphere 1000.0 10 > th dose independent rect. 6 20
828 485.60 radiation 1.0 30 > th dose independent rect. 6 1
841 485.64 wind 5.0 30 < th dose independent rect. 6 1
844 485.64 temperature 10.0 30 > th dose independent rect. 6 1
846 485.64 temperature 30.0 30 < th dose independent rect. 6 1
847 485.64 humidity 50.0 30 > th dose independent rect. 6 1
851 485.64 atmosphere 1015.0 30 < th dose independent rect. 6 1
855 485.64 precipitation 0.1 30 < th dose independent rect. 6 1
859 485.64 precipitation 0.1 30 < th dose dependent rect. 6 1
860 485.64 wind 5.0 30 < th dose dependent rect. 6 7
866 485.67 atmosphere 1010.0 270 < th dose dependent rect. 1 9
868 485.68 wind 1.0 30 > th dose independent rect. 6 1
872 485.69 temperature 15.0 10 > th dose dependent rect. 24 6
883 485.73 humidity 90.0 30 < th dose independent rect. 4 7
884 485.74 radiation 40.0 10 < th dose independent rect. 6 14
885 485.76 temperature 30.0 30 < th dose independent rect. 6 5
903 485.86 humidity 90.0 30 < th dose independent rect. 2 7
908 485.88 temperature 20.0 30 > th dose independent rect. 22 8
912 485.89 wind 9.0 30 < th dose dependent rect. 6 1
921 485.93 atmosphere 995.0 10 > th dose dependent rect. 6 18
923 485.94 wind 1.0 30 > th dose dependent rect. 6 1
928 485.96 temperature 10.0 30 > th dose dependent rect. 11 19
940 486.02 humidity 50.0 30 > th dose dependent rect. 6 1
941 486.02 wind 7.0 30 < th dose dependent rect. 20 10
943 486.03 temperature 25.0 10 < th dose dependent rect. 15 11
951 486.09 precipitation 0.1 30 < th dose independent rect. 9 21
952 486.09 precipitation 0.1 30 < th dose dependent rect. 9 21
955 486.11 humidity 80.0 30 > th dose independent rect. 20 10
967 486.17 radiation 1.0 10 > th dose dependent rect. 6 1
982 486.24 atmosphere 1000.0 10 < th dose independent rect. 2 12
988 486.27 wind 9.0 720 < th dose independent rect. 7 16
996 486.29 atmosphere 1010.0 270 < th dose dependent sin 6 NA