Os07g0491600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0491600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 85.42 | 0.434 | 9.3 | 0.129 | 0.22 | 0.724 | -0.27 | 0.462 | -0.0235 | 9.11 | 0.4438 | 4559 | -- | -- |
| 85.44 | 0.431 | 9.29 | 0.122 | 0.216 | 0.694 | -0.291 | -- | -0.0267 | 9.04 | 0.7258 | 5040 | -- | -- |
| 85.67 | 0.431 | 9.3 | 0.121 | 0.217 | 0.712 | -- | 0.459 | -0.0257 | 9.29 | 0.5312 | 4558 | -- | -- |
| 85.68 | 0.431 | 9.29 | 0.11 | 0.219 | 0.671 | -- | -- | -0.0266 | 9.29 | 0.7586 | 5040 | -- | -- |
| 88.41 | 0.438 | 9.3 | 0.119 | -- | 0.668 | -- | 0.307 | -0.024 | -- | 0.6596 | 4985 | -- | -- |
| 92.33 | 0.45 | 9.28 | -0.017 | 0.217 | -- | -0.254 | -- | 0.0415 | 9.03 | -- | -- | -- | -- |
| 92.54 | 0.45 | 9.28 | -0.0252 | 0.217 | -- | -- | -- | 0.0417 | 9.29 | -- | -- | -- | -- |
| 88.46 | 0.438 | 9.3 | 0.114 | -- | 0.65 | -- | -- | -0.0246 | -- | 0.8604 | 5020 | -- | -- |
| 85.97 | 0.432 | 9.29 | -- | 0.218 | 0.649 | -- | -- | -0.0298 | 9.21 | 0.6733 | 5040 | -- | -- |
| 95.28 | 0.456 | 9.28 | -0.0262 | -- | -- | -- | -- | 0.0426 | -- | -- | -- | -- | -- |
| 92.56 | 0.45 | 9.28 | -- | 0.217 | -- | -- | -- | 0.0445 | 9.3 | -- | -- | -- | -- |
| 88.76 | 0.439 | 9.3 | -- | -- | 0.649 | -- | -- | -0.0335 | -- | 0.7066 | 4984 | -- | -- |
| 95.29 | 0.456 | 9.28 | -- | -- | -- | -- | -- | 0.0455 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 82.02 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 15 |
| 3 | 82.32 | temperature | 30.0 | 90 | < th | dose independent | rect. | 9 | 18 |
| 31 | 83.32 | temperature | 30.0 | 270 | < th | dose independent | rect. | 7 | 18 |
| 36 | 83.36 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 12 | 8 |
| 60 | 83.72 | temperature | 30.0 | 270 | < th | dose independent | rect. | 6 | 21 |
| 65 | 83.75 | temperature | 20.0 | 270 | > th | dose independent | rect. | 12 | 8 |
| 68 | 83.77 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 12 | 21 |
| 73 | 83.87 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 8 | 1 |
| 85 | 83.98 | temperature | 30.0 | 10 | < th | dose independent | rect. | 9 | 5 |
| 86 | 83.98 | humidity | 90.0 | 270 | < th | dose independent | rect. | 12 | 8 |
| 109 | 84.13 | wind | 9.0 | 43200 | < th | dose independent | rect. | 6 | 8 |
| 110 | 84.13 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 10 | 5 |
| 112 | 84.15 | wind | 9.0 | 43200 | > th | dose independent | rect. | 5 | 9 |
| 113 | 84.15 | wind | 9.0 | 43200 | > th | dose independent | rect. | 2 | 12 |
| 117 | 84.16 | wind | 9.0 | 43200 | > th | dose independent | rect. | 8 | 6 |
| 128 | 84.17 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 131 | 84.18 | wind | 9.0 | 43200 | < th | dose independent | rect. | 2 | 12 |
| 132 | 84.18 | wind | 9.0 | 43200 | > th | dose independent | rect. | 24 | 14 |
| 139 | 84.19 | humidity | 50.0 | 90 | > th | dose independent | rect. | 9 | 18 |
| 142 | 84.20 | temperature | 20.0 | 720 | > th | dose dependent | sin | 6 | NA |
| 143 | 84.21 | radiation | 40.0 | 90 | < th | dose independent | rect. | 3 | 6 |
| 156 | 84.25 | temperature | 30.0 | 90 | < th | dose independent | rect. | 9 | 6 |
| 161 | 84.26 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 6 |
| 163 | 84.26 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 6 |
| 167 | 84.28 | humidity | 60.0 | 90 | > th | dose independent | rect. | 3 | 6 |
| 168 | 84.29 | temperature | 30.0 | 270 | < th | dose independent | rect. | 7 | 5 |
| 171 | 84.29 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 4 | 5 |
| 177 | 84.30 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 9 | 18 |
| 186 | 84.34 | wind | 9.0 | 90 | < th | dose independent | rect. | 3 | 6 |
| 187 | 84.34 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 6 |
| 190 | 84.34 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 3 | 6 |
| 191 | 84.34 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 3 | 6 |
| 193 | 84.34 | temperature | 10.0 | 90 | > th | dose independent | rect. | 9 | 18 |
| 197 | 84.34 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 21 | 16 |
| 199 | 84.35 | humidity | 70.0 | 90 | > th | dose independent | rect. | 18 | 9 |
| 209 | 84.40 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 1 | 13 |
| 213 | 84.41 | wind | 9.0 | 90 | < th | dose independent | rect. | 9 | 18 |
| 217 | 84.42 | radiation | 40.0 | 90 | < th | dose independent | rect. | 12 | 21 |
| 219 | 84.42 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 3 | 6 |
| 220 | 84.42 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 18 | 7 |
| 225 | 84.43 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 2 | 11 |
| 230 | 84.45 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 9 | 18 |
| 235 | 84.46 | humidity | 70.0 | 270 | > th | dose independent | rect. | 16 | 10 |
| 240 | 84.47 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 254 | 84.53 | temperature | 30.0 | 270 | < th | dose independent | rect. | 16 | 10 |
| 256 | 84.53 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 267 | 84.55 | temperature | 30.0 | 90 | < th | dose independent | rect. | 3 | 6 |
| 284 | 84.57 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 16 | NA |
| 290 | 84.58 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 22 | 1 |
| 305 | 84.60 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 7 | 18 |
| 328 | 84.65 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 9 | 18 |
| 336 | 84.66 | wind | 1.0 | 90 | > th | dose independent | rect. | 9 | 18 |
| 363 | 84.70 | wind | 9.0 | 43200 | > th | dose independent | sin | 5 | NA |
| 367 | 84.71 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 5 | 9 |
| 379 | 84.73 | temperature | 30.0 | 90 | < th | dose independent | rect. | 18 | 9 |
| 398 | 84.75 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 423 | 84.79 | wind | 9.0 | 43200 | < th | dose independent | sin | 5 | NA |
| 425 | 84.79 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 18 | 9 |
| 446 | 84.81 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 18 |
| 447 | 84.81 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 9 | 18 |
| 452 | 84.81 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 9 | 18 |
| 453 | 84.81 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 3 | 20 |
| 468 | 84.84 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 7 | 16 |
| 470 | 84.84 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 14 | 19 |
| 479 | 84.86 | temperature | 20.0 | 270 | > th | dose dependent | sin | 22 | NA |
| 499 | 84.89 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 12 | 19 |
| 509 | 84.89 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 12 | 19 |
| 513 | 84.90 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 16 | 11 |
| 518 | 84.91 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 532 | 84.92 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 2 | 7 |
| 535 | 84.93 | temperature | 30.0 | 270 | < th | dose independent | rect. | 9 | 1 |
| 550 | 84.94 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 580 | 84.97 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 16 | 10 |
| 582 | 84.97 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 3 | 10 |
| 589 | 84.98 | radiation | 1.0 | 90 | > th | dose independent | rect. | 9 | 6 |
| 613 | 84.99 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 7 | 6 |
| 620 | 84.99 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 19 |
| 623 | 85.00 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 637 | 85.01 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 18 | 5 |
| 643 | 85.01 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 17 |
| 650 | 85.02 | temperature | 30.0 | 270 | < th | dose independent | rect. | 21 | 15 |
| 658 | 85.02 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 7 | 14 |
| 670 | 85.03 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 701 | 85.05 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 5 |
| 712 | 85.05 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 23 | 12 |
| 718 | 85.06 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 5 |
| 719 | 85.06 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 5 |
| 720 | 85.06 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 5 |
| 726 | 85.06 | temperature | 10.0 | 270 | > th | dose independent | rect. | 12 | 19 |
| 736 | 85.07 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 15 | 18 |
| 737 | 85.07 | temperature | 30.0 | 270 | < th | dose independent | rect. | 16 | 21 |
| 745 | 85.07 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 17 |
| 747 | 85.07 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 15 | 18 |
| 755 | 85.08 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 5 |
| 761 | 85.08 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 5 |
| 762 | 85.08 | wind | 9.0 | 90 | < th | dose dependent | rect. | 3 | 6 |
| 787 | 85.10 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 5 |
| 812 | 85.11 | radiation | 1.0 | 270 | < th | dose independent | rect. | 16 | 11 |
| 814 | 85.11 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 20 |
| 815 | 85.11 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 24 | 21 |
| 823 | 85.11 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 20 |
| 830 | 85.11 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 23 |
| 836 | 85.12 | humidity | 90.0 | 14400 | > th | dose dependent | no | NA | NA |
| 858 | 85.13 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 13 | 11 |
| 860 | 85.13 | radiation | 40.0 | 90 | < th | dose independent | rect. | 15 | 18 |
| 863 | 85.13 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 881 | 85.14 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 5 |
| 900 | 85.15 | wind | 3.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 905 | 85.15 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 12 | 21 |
| 918 | 85.15 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 12 | 21 |
| 922 | 85.16 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 19 |
| 957 | 85.19 | humidity | 90.0 | 14400 | > th | dose independent | sin | 17 | NA |
| 959 | 85.19 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 3 |
| 962 | 85.19 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 10 | 3 |
| 968 | 85.19 | wind | 9.0 | 270 | < th | dose independent | rect. | 12 | 19 |
| 969 | 85.19 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 13 | 21 |
| 978 | 85.19 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 19 |