Os07g0489000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Plant lipid transfer protein/Par allergen family protein.
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Os07g0489000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Plant lipid transfer protein/Par allergen family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 521.4 | 1.07 | 4.9 | 2.82 | 2.13 | 1.22 | -0.959 | 10 | 1.26 | 18 | 5.1 | 1540 | -- | -- |
| 553.37 | 1.1 | 4.74 | 2.79 | 2.01 | 0.726 | -1.2 | -- | 1.31 | 18.1 | 3.501 | 11621 | -- | -- |
| 523.65 | 1.07 | 4.9 | 2.83 | 2.12 | 1.22 | -- | 9.96 | 1.26 | 18 | 5.1 | 1540 | -- | -- |
| 550.21 | 1.09 | 4.75 | 3 | 2.07 | 1.28 | -- | -- | 1.3 | 18 | 3.6 | 11559 | -- | -- |
| 754.15 | 1.28 | 4.86 | 2.86 | -- | 1.67 | -- | 10.3 | 1.22 | -- | 5 | 1656 | -- | -- |
| 564.89 | 1.11 | 4.73 | 2.56 | 2.13 | -- | -0.823 | -- | 1.41 | 18 | -- | -- | -- | -- |
| 566.55 | 1.11 | 4.73 | 2.57 | 2.13 | -- | -- | -- | 1.41 | 18 | -- | -- | -- | -- |
| 729.09 | 1.26 | 4.68 | 2.79 | -- | 0.939 | -- | -- | 1.4 | -- | 3.6 | 11559 | -- | -- |
| 656.68 | 1.19 | 4.77 | -- | 2.15 | -1.57 | -- | -- | 1.1 | 18.2 | 8.825 | 18258 | -- | -- |
| 801.24 | 1.32 | 4.69 | 2.51 | -- | -- | -- | -- | 1.36 | -- | -- | -- | -- | -- |
| 740.41 | 1.27 | 4.79 | -- | 2.09 | -- | -- | -- | 1.12 | 18.1 | -- | -- | -- | -- |
| 856.69 | 1.36 | 4.84 | -- | -- | -1.7 | -- | -- | 0.734 | -- | 8.609 | 47520 | -- | -- |
| 966.99 | 1.45 | 4.76 | -- | -- | -- | -- | -- | 1.08 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 496.23 | atmosphere | 1000 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 2 | 496.53 | atmosphere | 1000 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 77 | 498.58 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 83 | 498.76 | atmosphere | 1000 | 14400 | < th | dose dependent | rect. | 24 | 1 |
| 94 | 499.07 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 5 | 5 |
| 107 | 499.40 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 108 | 499.46 | atmosphere | 1005 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 123 | 499.71 | atmosphere | 1005 | 14400 | < th | dose dependent | rect. | 1 | 4 |
| 137 | 499.84 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 5 | 5 |
| 187 | 500.35 | atmosphere | 1000 | 14400 | > th | dose independent | sin | 13 | NA |
| 206 | 500.62 | atmosphere | 1000 | 14400 | < th | dose independent | sin | 13 | NA |
| 290 | 501.26 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 343 | 501.56 | atmosphere | 1000 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 410 | 501.97 | atmosphere | 1005 | 14400 | < th | dose dependent | sin | 11 | NA |
| 651 | 502.98 | atmosphere | 1000 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 665 | 503.03 | atmosphere | 1000 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 669 | 503.04 | atmosphere | 1000 | 14400 | < th | dose independent | rect. | 15 | 3 |
| 679 | 503.07 | atmosphere | 1000 | 14400 | > th | dose independent | rect. | 15 | 3 |
| 690 | 503.10 | atmosphere | 1000 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 727 | 503.21 | atmosphere | 1000 | 14400 | > th | dose independent | rect. | 17 | 1 |