Os07g0484800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Adenine phosphoribosyltransferase (EC 2.4.2.7)-like protein.
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Os07g0484800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Adenine phosphoribosyltransferase (EC 2.4.2.7)-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 435.27 | 0.98 | 4.73 | 0.0163 | 1.52 | -4.23 | -1.77 | 4.05 | -0.208 | 9.36 | 23.7 | 6302 | 22.1 | -- |
| 435.98 | 0.972 | 4.81 | -0.307 | 1.46 | -4.81 | -1.62 | -- | -0.114 | 9.63 | 23.3 | 9069 | 19.5 | -- |
| 446.26 | 0.984 | 4.72 | 0.0395 | 1.52 | -4.29 | -- | 4.05 | -0.179 | 9.36 | 23.7 | 6279 | 21.8 | -- |
| 444.28 | 0.982 | 4.8 | -0.471 | 1.45 | -4.81 | -- | -- | -0.134 | 9.44 | 23.28 | 9072 | 19.9 | -- |
| 539.5 | 1.08 | 4.88 | -0.38 | -- | -4.56 | -- | 1.49 | -0.42 | -- | 23.8 | 6629 | 18.8 | -- |
| 967.54 | 1.46 | 5.24 | -3.4 | 1.45 | -- | -1.59 | -- | -2.04 | 9.17 | -- | -- | -- | -- |
| 976.42 | 1.46 | 5.24 | -3.46 | 1.46 | -- | -- | -- | -2.04 | 9.16 | -- | -- | -- | -- |
| 526.63 | 1.07 | 4.86 | -0.213 | -- | -5.11 | -- | -- | -0.121 | -- | 23.4 | 9461 | 17.9 | -- |
| 449.3 | 0.987 | 4.82 | -- | 1.46 | -4.91 | -- | -- | -0.102 | 9.42 | 23.3 | 9054 | 19.3 | -- |
| 1099.96 | 1.55 | 5.28 | -3.46 | -- | -- | -- | -- | -2.03 | -- | -- | -- | -- | -- |
| 1291.1 | 1.68 | 5.16 | -- | 1.46 | -- | -- | -- | -1.65 | 9.34 | -- | -- | -- | -- |
| 526.34 | 1.07 | 4.84 | -- | -- | -5.25 | -- | -- | -0.0928 | -- | 23.29 | 9460 | 17.7 | -- |
| 1415.71 | 1.76 | 5.19 | -- | -- | -- | -- | -- | -1.65 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 437.54 | temperature | 15 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 2 | 437.75 | temperature | 30 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 5 | 439.82 | temperature | 25 | 14400 | < th | dose dependent | rect. | 16 | 6 |
| 11 | 440.24 | temperature | 25 | 14400 | < th | dose dependent | rect. | 14 | 9 |
| 87 | 445.32 | temperature | 25 | 14400 | < th | dose dependent | sin | 18 | NA |
| 358 | 453.81 | temperature | 10 | 14400 | > th | dose dependent | sin | 18 | NA |
| 611 | 458.26 | temperature | 25 | 14400 | < th | dose dependent | no | NA | NA |
| 618 | 458.30 | temperature | 25 | 14400 | < th | dose dependent | rect. | 12 | 23 |
| 671 | 458.99 | temperature | 25 | 14400 | < th | dose dependent | rect. | 21 | 23 |
| 912 | 461.51 | temperature | 25 | 14400 | < th | dose independent | rect. | 14 | 4 |
| 927 | 461.63 | temperature | 25 | 14400 | < th | dose independent | rect. | 13 | 6 |