Os07g0484700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Myb, DNA-binding domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0484700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Myb, DNA-binding domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 49.62 | 0.331 | 10 | -1.66 | 0.664 | -0.916 | 0.634 | -0.0125 | 0.0995 | 3.83 | 23.28 | 205 | -- | -- |
| 49.53 | 0.328 | 10 | -1.66 | 0.666 | -0.935 | 0.652 | -- | 0.106 | 3.79 | 23 | 195 | -- | -- |
| 50.55 | 0.331 | 10.1 | -1.7 | 0.666 | -0.88 | -- | 0.335 | 0.0928 | 3.96 | 23.08 | 198 | -- | -- |
| 50.68 | 0.332 | 10.1 | -1.67 | 0.673 | -0.94 | -- | -- | 0.0965 | 3.93 | 23 | 198 | -- | -- |
| 68.5 | 0.385 | 10.1 | -1.69 | -- | -0.86 | -- | 0.0221 | 0.0515 | -- | 25.1 | 1146 | -- | -- |
| 59.81 | 0.363 | 10 | -1.45 | 0.571 | -- | 0.656 | -- | 0.231 | 4.01 | -- | -- | -- | -- |
| 61 | 0.366 | 10 | -1.46 | 0.579 | -- | -- | -- | 0.227 | 4.21 | -- | -- | -- | -- |
| 68.49 | 0.385 | 10.1 | -1.69 | -- | -0.855 | -- | -- | 0.0537 | -- | 25.2 | 1160 | -- | -- |
| 116.25 | 0.505 | 9.99 | -- | 0.571 | -0.227 | -- | -- | 0.365 | 4.09 | 23 | 198 | -- | -- |
| 79.09 | 0.416 | 10 | -1.43 | -- | -- | -- | -- | 0.243 | -- | -- | -- | -- | -- |
| 116.94 | 0.506 | 9.98 | -- | 0.551 | -- | -- | -- | 0.389 | 4.26 | -- | -- | -- | -- |
| 126.74 | 0.524 | 9.97 | -- | -- | 0.652 | -- | -- | 0.475 | -- | 34.7 | 79 | -- | -- |
| 133.32 | 0.539 | 9.99 | -- | -- | -- | -- | -- | 0.402 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 49.10 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 11 | 2 |
| 3 | 49.20 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 17 | 20 |
| 22 | 49.29 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 11 | 2 |
| 26 | 49.34 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 47 | 49.42 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 69 | 49.60 | humidity | 50.0 | 14400 | < th | dose dependent | sin | 7 | NA |
| 74 | 49.65 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 11 | 22 |
| 157 | 49.90 | humidity | 50.0 | 14400 | < th | dose dependent | no | NA | NA |
| 298 | 49.99 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 301 | 50.02 | wind | 3.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 302 | 50.02 | wind | 3.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 306 | 50.11 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 5 | 3 |
| 307 | 50.11 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 5 | 3 |
| 310 | 50.13 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 311 | 50.13 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 317 | 50.22 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 5 | 3 |
| 318 | 50.22 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 320 | 50.24 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 8 | 19 |
| 327 | 50.27 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 22 | 4 |
| 329 | 50.29 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 6 | 21 |
| 333 | 50.30 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 5 | 3 |
| 335 | 50.31 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 336 | 50.31 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 11 | 4 |
| 337 | 50.31 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 344 | 50.35 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 12 | 12 |
| 347 | 50.36 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 22 | 10 |
| 352 | 50.39 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 13 | 2 |
| 370 | 50.43 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 373 | 50.43 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 8 | 5 |
| 389 | 50.43 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 393 | 50.44 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 5 | 19 |
| 399 | 50.46 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 21 | 11 |
| 417 | 50.47 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 18 | 21 |
| 422 | 50.48 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 428 | 50.49 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 435 | 50.51 | wind | 3.0 | 14400 | > th | dose independent | rect. | 21 | 10 |
| 437 | 50.51 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 443 | 50.52 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 5 | 10 |
| 452 | 50.53 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 8 | 7 |
| 471 | 50.53 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 20 | 19 |
| 477 | 50.53 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 4 |
| 500 | 50.56 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 515 | 50.58 | wind | 3.0 | 14400 | < th | dose independent | rect. | 20 | 11 |
| 573 | 50.66 | humidity | 50.0 | 14400 | > th | dose independent | sin | 4 | NA |
| 586 | 50.66 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 19 | 22 |
| 596 | 50.68 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 613 | 50.69 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 7 |
| 616 | 50.69 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 21 | 20 |
| 647 | 50.74 | humidity | 50.0 | 14400 | < th | dose independent | sin | 5 | NA |
| 653 | 50.75 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 12 | 2 |
| 719 | 50.81 | atmosphere | 1015.0 | 4320 | > th | dose dependent | sin | 17 | NA |
| 728 | 50.82 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 6 |
| 729 | 50.82 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 15 | 6 |
| 736 | 50.82 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 740 | 50.83 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 7 |
| 761 | 50.85 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 1 | 7 |
| 789 | 50.88 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 12 | 11 |
| 790 | 50.88 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 11 | 22 |
| 842 | 50.92 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 7 |
| 865 | 50.93 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 11 | 22 |
| 892 | 50.95 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 12 | 11 |
| 904 | 50.95 | temperature | 20.0 | 30 | > th | dose independent | rect. | 1 | 23 |
| 907 | 50.95 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 22 | 1 |
| 953 | 50.98 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 11 | 9 |
| 961 | 50.98 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 7 | 14 |
| 962 | 50.98 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 5 | 15 |
| 987 | 50.98 | temperature | 25.0 | 270 | < th | dose dependent | no | NA | NA |
| 992 | 50.99 | humidity | 50.0 | 14400 | > th | dose independent | no | NA | NA |