Os07g0484600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os07g0484600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 49.64 | 0.331 | 9.29 | -0.843 | 0.736 | 0.875 | -0.316 | 0.682 | -0.336 | 8.57 | 19.8 | 1416 | -- | -- |
| 50.07 | 0.33 | 9.31 | -1.03 | 0.747 | 0.885 | -0.268 | -- | -0.378 | 8.61 | 20.48 | 1415 | -- | -- |
| 49.95 | 0.329 | 9.28 | -0.831 | 0.737 | 0.88 | -- | 0.753 | -0.332 | 8.6 | 19.7 | 1401 | -- | -- |
| 50.37 | 0.331 | 9.31 | -1.05 | 0.74 | 0.899 | -- | -- | -0.389 | 8.68 | 20.24 | 1383 | -- | -- |
| 80.38 | 0.418 | 9.3 | -0.845 | -- | 0.879 | -- | 0.73 | -0.323 | -- | 19.5 | 1442 | -- | -- |
| 75.35 | 0.407 | 9.26 | -0.707 | 0.739 | -- | -0.372 | -- | -0.179 | 8.2 | -- | -- | -- | -- |
| 75.77 | 0.408 | 9.26 | -0.717 | 0.739 | -- | -- | -- | -0.179 | 8.24 | -- | -- | -- | -- |
| 80.91 | 0.419 | 9.33 | -1.05 | -- | 0.887 | -- | -- | -0.375 | -- | 20.25 | 1440 | -- | -- |
| 74.89 | 0.405 | 9.28 | -- | 0.819 | 0.939 | -- | -- | -0.237 | 6.64 | 20.24 | 1383 | -- | -- |
| 105.91 | 0.481 | 9.28 | -0.712 | -- | -- | -- | -- | -0.17 | -- | -- | -- | -- | -- |
| 89.32 | 0.442 | 9.25 | -- | 0.735 | -- | -- | -- | -0.0988 | 8.31 | -- | -- | -- | -- |
| 106.07 | 0.48 | 9.3 | -- | -- | 0.576 | -- | -- | -0.213 | -- | 21.58 | 1434 | -- | -- |
| 119.27 | 0.51 | 9.26 | -- | -- | -- | -- | -- | -0.0913 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 47.66 | temperature | 20 | 720 | > th | dose dependent | rect. | 20 | 19 |
| 10 | 48.33 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 21 |
| 11 | 48.33 | temperature | 15 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 17 | 48.56 | temperature | 20 | 10 | > th | dose dependent | rect. | 5 | 19 |
| 33 | 48.90 | temperature | 15 | 270 | > th | dose dependent | rect. | 2 | 21 |
| 51 | 49.02 | temperature | 20 | 720 | > th | dose dependent | sin | 6 | NA |
| 59 | 49.06 | temperature | 20 | 1440 | > th | dose dependent | rect. | 5 | 2 |
| 65 | 49.09 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 13 |
| 101 | 49.24 | temperature | 20 | 10 | > th | dose dependent | rect. | 5 | 17 |
| 131 | 49.36 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 4 |
| 145 | 49.40 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 21 |
| 162 | 49.48 | temperature | 20 | 10 | > th | dose dependent | rect. | 5 | 15 |
| 206 | 49.62 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 20 |
| 218 | 49.64 | temperature | 20 | 1440 | > th | dose dependent | rect. | 9 | 22 |
| 222 | 49.66 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 226 | 49.66 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 20 |
| 229 | 49.67 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 241 | 49.68 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 23 |
| 271 | 49.72 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 23 |
| 276 | 49.73 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 23 |
| 317 | 49.81 | temperature | 10 | 1440 | > th | dose dependent | rect. | 2 | 10 |
| 347 | 49.84 | temperature | 20 | 1440 | > th | dose dependent | rect. | 19 | 3 |
| 371 | 49.88 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 8 |
| 385 | 49.89 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 6 |
| 647 | 50.15 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 8 |
| 648 | 50.15 | temperature | 30 | 1440 | < th | dose dependent | rect. | 2 | 10 |
| 794 | 50.26 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 20 |
| 820 | 50.28 | temperature | 30 | 1440 | < th | dose dependent | sin | 7 | NA |
| 821 | 50.28 | temperature | 30 | 720 | < th | dose dependent | sin | 4 | NA |
| 833 | 50.28 | temperature | 30 | 10 | < th | dose dependent | rect. | 8 | 22 |
| 923 | 50.37 | temperature | 30 | 1440 | < th | dose dependent | no | NA | NA |
| 934 | 50.37 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 976 | 50.40 | temperature | 30 | 1440 | < th | dose dependent | rect. | 8 | 23 |
| 994 | 50.42 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 4 |