Os07g0484500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1395 family protein.
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Os07g0484500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1395 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 143.19 | 0.562 | 5.64 | -0.0772 | 0.551 | 1.52 | -0.704 | -0.0944 | 0.182 | 0.0995 | 70.53 | 1412 | -- | -- |
| 143.17 | 0.557 | 5.64 | -0.084 | 0.575 | 1.52 | -0.695 | -- | 0.18 | 0.183 | 70.48 | 1390 | -- | -- |
| 145.23 | 0.561 | 5.64 | -0.0271 | 0.602 | 1.49 | -- | -0.0577 | 0.186 | 0.169 | 68.55 | 1371 | -- | -- |
| 144.95 | 0.561 | 5.64 | -0.0216 | 0.746 | 1.53 | -- | -- | 0.186 | 0.191 | 68.15 | 1253 | -- | -- |
| 159.91 | 0.589 | 5.62 | 0.00729 | -- | 1.67 | -- | -0.509 | 0.208 | -- | 71.02 | 1554 | -- | -- |
| 177.33 | 0.624 | 5.68 | -0.0614 | 0.528 | -- | -0.828 | -- | 0.0102 | 23.8 | -- | -- | -- | -- |
| 180.28 | 0.629 | 5.68 | -0.0275 | 0.532 | -- | -- | -- | 0.0143 | 23.7 | -- | -- | -- | -- |
| 160.14 | 0.589 | 5.62 | -0.074 | -- | 1.57 | -- | -- | 0.195 | -- | 71 | 1564 | -- | -- |
| 144.96 | 0.561 | 5.64 | -- | 0.754 | 1.51 | -- | -- | 0.181 | 0.213 | 68 | 1251 | -- | -- |
| 198.06 | 0.658 | 5.66 | -0.0124 | -- | -- | -- | -- | 0.0206 | -- | -- | -- | -- | -- |
| 180.3 | 0.628 | 5.68 | -- | 0.531 | -- | -- | -- | 0.0174 | 23.7 | -- | -- | -- | -- |
| 160.26 | 0.59 | 5.62 | -- | -- | 1.56 | -- | -- | 0.202 | -- | 70.28 | 1556 | -- | -- |
| 198.07 | 0.657 | 5.66 | -- | -- | -- | -- | -- | 0.022 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 132.72 | humidity | 80 | 1440 | > th | dose independent | rect. | 10 | 2 |
| 2 | 132.93 | humidity | 70 | 1440 | > th | dose dependent | rect. | 10 | 2 |
| 3 | 133.94 | humidity | 80 | 1440 | < th | dose independent | rect. | 10 | 2 |
| 5 | 134.54 | humidity | 60 | 1440 | > th | dose dependent | rect. | 23 | 13 |
| 8 | 134.71 | humidity | 70 | 1440 | > th | dose dependent | rect. | 1 | 12 |
| 25 | 135.36 | humidity | 70 | 1440 | > th | dose dependent | sin | 4 | NA |
| 43 | 136.03 | wind | 5 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 45 | 136.09 | wind | 3 | 43200 | < th | dose dependent | rect. | 23 | 7 |
| 113 | 137.98 | wind | 1 | 43200 | > th | dose dependent | rect. | 24 | 2 |
| 130 | 138.44 | wind | 3 | 43200 | < th | dose independent | rect. | 24 | 2 |
| 188 | 139.58 | humidity | 90 | 1440 | < th | dose dependent | rect. | 22 | 14 |
| 213 | 140.05 | wind | 3 | 43200 | > th | dose independent | rect. | 24 | 2 |
| 239 | 140.30 | humidity | 90 | 720 | < th | dose independent | rect. | 18 | 18 |
| 275 | 140.73 | humidity | 90 | 720 | > th | dose dependent | rect. | 6 | 17 |
| 290 | 140.86 | wind | 3 | 43200 | < th | dose independent | rect. | 23 | 5 |
| 291 | 140.86 | humidity | 90 | 720 | < th | dose independent | rect. | 16 | 20 |
| 295 | 140.90 | wind | 3 | 43200 | < th | dose independent | rect. | 23 | 8 |
| 346 | 141.33 | wind | 3 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 377 | 141.55 | humidity | 90 | 720 | > th | dose independent | rect. | 3 | 20 |
| 390 | 141.62 | humidity | 80 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 400 | 141.68 | wind | 3 | 43200 | > th | dose independent | rect. | 23 | 8 |
| 411 | 141.80 | wind | 3 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 418 | 141.86 | wind | 3 | 43200 | > th | dose independent | rect. | 23 | 5 |
| 438 | 141.97 | humidity | 80 | 720 | > th | dose dependent | rect. | 2 | 22 |
| 439 | 141.98 | humidity | 80 | 14400 | > th | dose independent | rect. | 13 | 3 |
| 451 | 142.08 | wind | 3 | 43200 | < th | dose dependent | sin | 9 | NA |
| 465 | 142.16 | wind | 1 | 43200 | > th | dose dependent | rect. | 23 | 8 |
| 521 | 142.39 | temperature | 15 | 4320 | < th | dose dependent | rect. | 11 | 2 |
| 534 | 142.47 | wind | 3 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 546 | 142.54 | humidity | 90 | 1440 | < th | dose dependent | sin | 7 | NA |
| 650 | 143.00 | humidity | 70 | 14400 | < th | dose dependent | rect. | 19 | 13 |
| 668 | 143.11 | humidity | 80 | 14400 | < th | dose independent | rect. | 13 | 3 |
| 694 | 143.21 | wind | 1 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 702 | 143.25 | temperature | 15 | 4320 | < th | dose dependent | rect. | 10 | 7 |
| 715 | 143.29 | humidity | 90 | 720 | < th | dose independent | rect. | 1 | 22 |
| 733 | 143.35 | humidity | 70 | 1440 | > th | dose dependent | no | NA | NA |
| 764 | 143.44 | humidity | 70 | 1440 | > th | dose dependent | rect. | 5 | 23 |
| 831 | 143.72 | humidity | 80 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 891 | 143.91 | humidity | 80 | 14400 | > th | dose independent | rect. | 10 | 6 |
| 916 | 144.00 | humidity | 90 | 720 | > th | dose dependent | sin | 22 | NA |
| 956 | 144.19 | humidity | 70 | 1440 | > th | dose dependent | rect. | 9 | 23 |
| 962 | 144.22 | humidity | 90 | 1440 | > th | dose independent | rect. | 5 | 16 |
| 969 | 144.24 | temperature | 15 | 4320 | < th | dose independent | rect. | 11 | 2 |
| 989 | 144.31 | humidity | 90 | 14400 | > th | dose independent | rect. | 19 | 2 |