Os07g0471200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0471200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 86.86 | 0.438 | 3.34 | 0.331 | 0.264 | -0.397 | 0.201 | -1.49 | -0.1 | 8.6 | 79.44 | 4875 | -- | -- |
| 89.59 | 0.441 | 3.33 | 0.11 | 0.245 | -0.402 | 0.00518 | -- | -0.149 | 8.33 | 76.97 | 4712 | -- | -- |
| 86.96 | 0.434 | 3.34 | 0.333 | 0.258 | -0.403 | -- | -1.44 | -0.105 | 8.39 | 80 | 4796 | -- | -- |
| 89.59 | 0.441 | 3.32 | 0.113 | 0.248 | -0.392 | -- | -- | -0.144 | 8.35 | 76.76 | 4727 | -- | -- |
| 90.07 | 0.442 | 3.34 | 0.314 | -- | -0.344 | -- | -1.4 | -0.077 | -- | 79.57 | 4590 | -- | -- |
| 91.58 | 0.449 | 3.29 | 0.0607 | 0.213 | -- | 0.0529 | -- | 0.0247 | 8.99 | -- | -- | -- | -- |
| 91.59 | 0.448 | 3.29 | 0.0624 | 0.213 | -- | -- | -- | 0.0247 | 8.93 | -- | -- | -- | -- |
| 92.5 | 0.448 | 3.33 | 0.0999 | -- | -0.355 | -- | -- | -0.124 | -- | 75.32 | 4460 | -- | -- |
| 89.9 | 0.442 | 3.32 | -- | 0.253 | -0.366 | -- | -- | -0.144 | 8.34 | 75.91 | 4788 | -- | -- |
| 94.19 | 0.453 | 3.29 | 0.0623 | -- | -- | -- | -- | 0.0261 | -- | -- | -- | -- | -- |
| 91.7 | 0.448 | 3.29 | -- | 0.213 | -- | -- | -- | 0.0177 | 8.91 | -- | -- | -- | -- |
| 92.75 | 0.449 | 3.32 | -- | -- | -0.334 | -- | -- | -0.116 | -- | 70.55 | 4434 | -- | -- |
| 94.29 | 0.453 | 3.29 | -- | -- | -- | -- | -- | 0.0192 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 84.70 | wind | 3.0 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 2 | 84.82 | wind | 3.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 3 | 85.06 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 4 | 85.07 | radiation | 40.0 | 10 | < th | dose independent | rect. | 3 | 23 |
| 5 | 85.36 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 3 | 5 |
| 8 | 85.38 | humidity | 90.0 | 4320 | < th | dose independent | rect. | 4 | 3 |
| 14 | 85.49 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 3 | 5 |
| 21 | 85.68 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 30 | 85.94 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 43 | 86.11 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 5 | 2 |
| 47 | 86.15 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 52 | 86.17 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 2 | 1 |
| 74 | 86.31 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 78 | 86.33 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 2 | 2 |
| 82 | 86.34 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 23 | 10 |
| 91 | 86.44 | atmosphere | 1010.0 | 10 | < th | dose dependent | rect. | 2 | 1 |
| 128 | 86.58 | humidity | 80.0 | 4320 | > th | dose dependent | sin | 7 | NA |
| 140 | 86.62 | temperature | 25.0 | 90 | > th | dose independent | rect. | 1 | 1 |
| 152 | 86.63 | radiation | 40.0 | 10 | < th | dose independent | rect. | 3 | 9 |
| 156 | 86.65 | wind | 3.0 | 10 | < th | dose independent | rect. | 2 | 1 |
| 158 | 86.65 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 3 | 5 |
| 185 | 86.70 | wind | 9.0 | 10 | < th | dose dependent | rect. | 2 | 1 |
| 191 | 86.71 | temperature | 10.0 | 10 | > th | dose independent | rect. | 2 | 1 |
| 193 | 86.71 | temperature | 30.0 | 10 | < th | dose independent | rect. | 2 | 1 |
| 194 | 86.71 | humidity | 50.0 | 10 | > th | dose independent | rect. | 2 | 1 |
| 197 | 86.71 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 2 | 1 |
| 198 | 86.71 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 2 | 1 |
| 200 | 86.71 | radiation | 1.0 | 10 | < th | dose independent | rect. | 2 | 1 |
| 205 | 86.71 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 2 | 1 |
| 206 | 86.71 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 4 | 2 |
| 208 | 86.71 | wind | 9.0 | 10 | < th | dose independent | rect. | 3 | 23 |
| 209 | 86.71 | temperature | 10.0 | 10 | > th | dose independent | rect. | 3 | 23 |
| 212 | 86.71 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 2 | 1 |
| 213 | 86.71 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 2 | 1 |
| 218 | 86.71 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 2 | 1 |
| 223 | 86.72 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 2 | 1 |
| 233 | 86.74 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 2 | 1 |
| 245 | 86.76 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 329 | 86.85 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 4 | 1 |
| 334 | 86.86 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 2 | 1 |
| 360 | 86.89 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 378 | 86.92 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 414 | 87.00 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 436 | 87.05 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 438 | 87.05 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 440 | 87.05 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 455 | 87.08 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 461 | 87.09 | humidity | 90.0 | 4320 | < th | dose independent | sin | 6 | NA |
| 521 | 87.17 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 522 | 87.17 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 525 | 87.17 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 529 | 87.17 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 538 | 87.17 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 539 | 87.17 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 561 | 87.17 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 624 | 87.25 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 10 | 4 |
| 648 | 87.27 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 21 | 12 |
| 703 | 87.33 | humidity | 90.0 | 4320 | > th | dose independent | sin | 6 | NA |
| 704 | 87.33 | wind | 9.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 714 | 87.34 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 21 | 3 |
| 718 | 87.35 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 20 | 5 |
| 733 | 87.36 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 15 | 1 |
| 764 | 87.40 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 776 | 87.41 | radiation | 40.0 | 10 | < th | dose independent | rect. | 3 | 12 |
| 780 | 87.41 | wind | 5.0 | 30 | < th | dose dependent | rect. | 3 | 9 |
| 881 | 87.50 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 20 | 6 |
| 958 | 87.58 | radiation | 40.0 | 10 | > th | dose independent | rect. | 14 | 23 |
| 977 | 87.59 | humidity | 90.0 | 4320 | < th | dose dependent | sin | 9 | NA |
| 994 | 87.61 | radiation | 40.0 | 10 | < th | dose independent | rect. | 21 | 23 |