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Os07g0470400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.9 (0.021) R2 : 0.0245
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.149 (0.0441) R2dN8 : 0.0316 R2N8 : 0.0245
σ : 0.395
deviance : 71.47
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
51.58 0.337 6.9 0.0723 0.527 -0.636 0.0728 0.646 -0.18 7.22 52.78 49 -- --
51.59 0.335 6.9 0.0979 0.522 -0.792 0.162 -- -0.174 7.24 53.22 85 -- --
51.52 0.334 6.9 0.0753 0.525 -0.681 -- 0.681 -0.183 7.24 53.05 72 -- --
51.56 0.334 6.89 0.0748 0.525 -0.87 -- -- -0.172 7.28 53.44 86 -- --
62.68 0.369 6.91 0.114 -- -0.613 -- 0.462 -0.15 -- 53.61 598 -- --
57.14 0.354 6.89 0.156 0.51 -- 0.0748 -- -0.141 6.66 -- -- -- --
57.15 0.354 6.89 0.157 0.51 -- -- -- -0.141 6.61 -- -- -- --
62.9 0.369 6.9 0.088 -- -0.722 -- -- -0.145 -- 54.4 597 -- --
51.71 0.335 6.9 -- 0.527 -0.903 -- -- -0.181 7.29 53.5 86 -- --
70.72 0.393 6.9 0.169 -- -- -- -- -0.131 -- -- -- -- --
57.8 0.356 6.89 -- 0.512 -- -- -- -0.158 6.6 -- -- -- --
63.11 0.37 6.91 -- -- -0.753 -- -- -0.158 -- 54.43 598 -- --
71.47 0.395 6.9 -- -- -- -- -- -0.149 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 47.16 temperature 15.0 720 > th dose independent rect. 19 5
2 47.72 humidity 90.0 720 < th dose independent rect. 12 3
3 48.08 temperature 15.0 270 > th dose independent rect. 19 12
4 48.20 temperature 15.0 720 > th dose independent rect. 12 3
5 48.22 temperature 15.0 720 > th dose independent rect. 12 12
6 48.46 temperature 15.0 720 > th dose independent rect. 12 10
9 48.98 atmosphere 995.0 720 > th dose dependent rect. 15 4
14 49.38 radiation 30.0 720 < th dose independent rect. 15 4
16 49.45 temperature 15.0 1440 > th dose independent rect. 6 13
20 49.59 atmosphere 1000.0 270 > th dose independent rect. 17 10
21 49.59 radiation 40.0 30 < th dose independent rect. 3 23
22 49.63 radiation 1.0 10 > th dose dependent rect. 9 3
23 49.65 precipitation 0.1 720 < th dose independent rect. 10 14
24 49.65 precipitation 0.1 720 < th dose dependent rect. 10 14
25 49.67 radiation 30.0 720 < th dose independent rect. 15 12
27 49.73 precipitation 0.1 720 < th dose independent rect. 12 10
28 49.73 precipitation 0.1 720 < th dose dependent rect. 12 10
33 49.76 atmosphere 995.0 270 > th dose dependent rect. 15 12
36 49.81 atmosphere 995.0 720 > th dose independent rect. 15 4
41 49.82 atmosphere 995.0 30 > th dose dependent rect. 18 11
44 49.87 wind 1.0 270 > th dose independent rect. 3 4
47 49.93 atmosphere 995.0 720 > th dose independent rect. 24 19
49 49.94 wind 1.0 10 > th dose independent rect. 12 21
50 49.96 radiation 10.0 720 < th dose independent rect. 17 10
52 50.02 atmosphere 1010.0 720 < th dose independent rect. 12 3
55 50.05 atmosphere 1000.0 270 > th dose independent rect. 7 20
58 50.10 precipitation 0.1 720 < th dose independent rect. 19 5
59 50.10 precipitation 0.1 720 < th dose dependent rect. 19 5
60 50.12 atmosphere 995.0 720 > th dose independent rect. 15 21
61 50.13 wind 1.0 10 > th dose independent rect. 14 19
62 50.13 precipitation 0.1 720 < th dose independent rect. 19 20
63 50.13 wind 1.0 10 > th dose independent rect. 12 23
65 50.13 precipitation 0.1 720 < th dose dependent rect. 19 20
67 50.14 precipitation 0.1 720 < th dose independent rect. 12 19
70 50.14 precipitation 0.1 720 < th dose dependent rect. 12 19
72 50.16 temperature 15.0 30 > th dose independent rect. 12 12
73 50.18 atmosphere 1000.0 720 > th dose independent rect. 17 2
77 50.23 wind 5.0 270 < th dose independent rect. 3 4
79 50.23 temperature 15.0 30 > th dose independent rect. 3 23
80 50.24 radiation 40.0 270 < th dose dependent rect. 15 12
81 50.25 humidity 50.0 90 > th dose dependent rect. 18 11
83 50.29 radiation 10.0 720 < th dose independent rect. 3 4
85 50.29 radiation 20.0 720 < th dose dependent rect. 17 10
86 50.30 humidity 90.0 10 < th dose independent rect. 23 10
110 50.35 temperature 15.0 720 > th dose independent rect. 12 19
128 50.39 precipitation 0.1 720 < th dose independent rect. 3 21
129 50.39 precipitation 0.1 720 < th dose dependent rect. 3 21
130 50.40 radiation 40.0 30 < th dose independent rect. 5 13
132 50.41 atmosphere 1000.0 720 > th dose independent rect. 24 3
134 50.42 wind 7.0 720 < th dose independent rect. 19 5
135 50.42 temperature 15.0 30 > th dose independent rect. 12 21
136 50.43 temperature 15.0 10 > th dose independent rect. 14 12
141 50.45 temperature 15.0 720 > th dose independent rect. 7 5
148 50.50 radiation 30.0 10 > th dose independent rect. 9 3
151 50.51 humidity 90.0 10 < th dose independent rect. 14 19
155 50.52 radiation 1.0 30 > th dose dependent rect. 11 1
163 50.55 temperature 15.0 30 > th dose independent rect. 12 23
166 50.57 temperature 15.0 10 > th dose independent rect. 14 19
168 50.57 humidity 90.0 30 < th dose independent rect. 12 21
177 50.60 radiation 40.0 720 < th dose independent rect. 3 6
180 50.61 wind 3.0 720 < th dose independent rect. 20 2
182 50.62 wind 9.0 720 < th dose independent rect. 19 20
184 50.63 temperature 15.0 10 > th dose independent rect. 14 10
190 50.65 radiation 30.0 720 < th dose independent rect. 15 6
191 50.65 radiation 10.0 720 < th dose independent rect. 21 10
195 50.66 atmosphere 1015.0 720 < th dose independent rect. 24 19
198 50.67 precipitation 0.1 270 < th dose independent rect. 3 4
201 50.67 precipitation 0.1 270 < th dose dependent rect. 3 4
205 50.68 radiation 30.0 90 < th dose independent rect. 5 6
223 50.69 temperature 15.0 30 > th dose independent rect. 19 14
246 50.71 radiation 40.0 90 < th dose dependent rect. 5 6
256 50.75 temperature 15.0 720 > th dose independent rect. 21 1
257 50.75 humidity 70.0 270 > th dose independent rect. 3 4
265 50.76 humidity 70.0 90 > th dose independent rect. 18 11
268 50.76 temperature 15.0 30 > th dose independent rect. 21 12
284 50.78 radiation 1.0 720 > th dose independent rect. 12 3
290 50.79 wind 9.0 270 < th dose independent rect. 3 13
291 50.79 radiation 1.0 720 < th dose dependent rect. 19 5
293 50.80 temperature 30.0 720 < th dose independent rect. 19 5
294 50.80 humidity 50.0 720 > th dose independent rect. 19 5
295 50.80 atmosphere 995.0 720 > th dose independent rect. 19 5
296 50.80 radiation 1.0 720 < th dose independent rect. 19 5
301 50.80 temperature 15.0 720 > th dose independent rect. 17 10
302 50.80 temperature 10.0 720 > th dose independent rect. 24 19
303 50.80 temperature 10.0 720 > th dose dependent rect. 3 4
322 50.81 precipitation 0.1 720 < th dose independent rect. 7 5
323 50.81 precipitation 0.1 720 < th dose dependent rect. 7 5
331 50.83 precipitation 0.1 270 < th dose independent rect. 3 13
332 50.83 radiation 40.0 10 < th dose independent rect. 5 21
333 50.83 radiation 40.0 10 > th dose independent rect. 13 23
334 50.83 radiation 40.0 270 < th dose dependent rect. 3 4
336 50.83 precipitation 0.1 270 < th dose dependent rect. 3 13
340 50.84 radiation 40.0 720 < th dose independent rect. 19 14
341 50.84 wind 3.0 720 < th dose dependent rect. 21 1
344 50.85 temperature 10.0 270 > th dose independent rect. 3 4
346 50.85 temperature 30.0 270 < th dose independent rect. 3 4
347 50.85 humidity 50.0 270 > th dose independent rect. 3 4
349 50.85 atmosphere 995.0 270 > th dose independent rect. 3 4
350 50.85 atmosphere 1015.0 270 < th dose independent rect. 3 4
354 50.85 atmosphere 995.0 720 > th dose independent rect. 7 5
355 50.85 atmosphere 1015.0 720 < th dose independent rect. 7 5
356 50.85 wind 9.0 720 < th dose independent rect. 24 10
359 50.85 temperature 10.0 720 > th dose independent rect. 22 14
360 50.85 atmosphere 995.0 720 > th dose independent rect. 22 14
362 50.85 temperature 10.0 270 > th dose independent rect. 7 20
364 50.85 radiation 40.0 720 < th dose dependent rect. 15 4
366 50.85 radiation 40.0 10 > th dose dependent rect. 13 23
375 50.86 temperature 10.0 720 > th dose independent rect. 24 10
376 50.86 humidity 50.0 720 > th dose independent rect. 24 10
377 50.86 atmosphere 995.0 720 > th dose independent rect. 24 10
387 50.88 temperature 10.0 720 > th dose independent rect. 15 4
388 50.88 atmosphere 1015.0 720 < th dose independent rect. 15 4
391 50.88 temperature 10.0 720 > th dose independent rect. 19 20
393 50.88 temperature 10.0 720 > th dose dependent rect. 12 3
396 50.89 wind 9.0 720 < th dose independent rect. 12 19
404 50.92 atmosphere 995.0 720 > th dose independent rect. 9 10
407 50.93 radiation 30.0 720 < th dose independent rect. 15 14
456 50.97 radiation 10.0 720 < th dose dependent rect. 17 2
464 50.99 atmosphere 995.0 720 > th dose independent rect. 7 14
465 50.99 precipitation 0.1 720 < th dose independent rect. 21 18
470 50.99 precipitation 0.1 720 < th dose dependent rect. 21 18
471 51.01 radiation 10.0 720 < th dose independent rect. 17 2
472 51.01 wind 9.0 720 < th dose independent rect. 7 5
476 51.01 radiation 10.0 720 < th dose independent rect. 19 12
482 51.02 temperature 10.0 270 > th dose independent rect. 3 13
483 51.02 atmosphere 1015.0 270 < th dose independent rect. 3 13
487 51.03 humidity 90.0 10 < th dose independent rect. 21 12
503 51.05 wind 9.0 270 < th dose independent rect. 16 11
518 51.06 radiation 20.0 90 < th dose independent rect. 5 4
520 51.06 humidity 50.0 720 > th dose dependent rect. 24 3
533 51.09 radiation 1.0 720 > th dose independent rect. 7 5
538 51.10 atmosphere 1015.0 720 < th dose dependent rect. 12 3
565 51.12 precipitation 0.1 720 < th dose independent rect. 12 3
570 51.12 precipitation 0.1 720 < th dose dependent rect. 12 3
579 51.15 wind 7.0 270 < th dose independent rect. 19 12
585 51.16 precipitation 0.1 720 < th dose independent rect. 12 12
589 51.16 precipitation 0.1 720 < th dose dependent rect. 12 12
591 51.17 wind 9.0 270 < th dose dependent rect. 3 4
604 51.19 precipitation 0.1 270 < th dose independent rect. 19 12
608 51.19 precipitation 0.1 270 < th dose dependent rect. 19 12
618 51.21 wind 9.0 720 < th dose independent rect. 22 14
619 51.21 precipitation 0.1 270 < th dose independent rect. 7 20
620 51.21 precipitation 0.1 270 < th dose dependent rect. 7 20
621 51.22 temperature 15.0 30 > th dose independent rect. 23 10
622 51.22 temperature 15.0 270 > th dose independent rect. 7 12
623 51.22 radiation 40.0 30 < th dose independent rect. 5 19
626 51.23 precipitation 0.1 720 < th dose independent rect. 24 10
628 51.23 precipitation 0.1 720 < th dose dependent rect. 24 10
640 51.27 humidity 80.0 720 > th dose independent rect. 24 3
643 51.28 atmosphere 1010.0 720 < th dose independent rect. 12 1
644 51.28 radiation 20.0 30 > th dose independent rect. 11 1
646 51.28 wind 9.0 270 < th dose independent rect. 7 20
670 51.32 wind 9.0 720 < th dose independent rect. 21 18
691 51.33 humidity 90.0 10 < th dose independent rect. 2 7
693 51.33 precipitation 0.1 720 < th dose independent rect. 19 14
697 51.33 precipitation 0.1 720 < th dose dependent rect. 19 14
701 51.34 humidity 90.0 720 < th dose dependent rect. 12 3
702 51.34 temperature 20.0 720 > th dose dependent rect. 3 4
705 51.35 atmosphere 1015.0 270 < th dose independent rect. 7 20
707 51.35 atmosphere 995.0 270 > th dose dependent rect. 3 4
710 51.36 wind 9.0 720 < th dose independent rect. 15 4
714 51.36 wind 1.0 10 > th dose independent rect. 19 14
719 51.37 humidity 50.0 720 > th dose independent rect. 7 5
722 51.37 wind 1.0 10 > th dose independent rect. 16 17
723 51.37 wind 1.0 270 > th dose independent rect. 7 20
739 51.38 precipitation 0.1 720 < th dose independent rect. 22 14
750 51.38 precipitation 0.1 720 < th dose dependent rect. 22 14
754 51.40 wind 9.0 720 < th dose independent rect. 12 10
756 51.40 radiation 10.0 30 < th dose dependent sin 11 NA
758 51.40 radiation 30.0 270 < th dose dependent rect. 3 8
760 51.41 radiation 1.0 90 < th dose independent sin 11 NA
764 51.41 humidity 50.0 720 > th dose independent rect. 22 14
770 51.42 wind 9.0 720 < th dose independent rect. 12 3
775 51.42 temperature 10.0 720 > th dose independent rect. 3 6
776 51.42 humidity 50.0 720 > th dose independent rect. 3 6
777 51.42 atmosphere 995.0 720 > th dose independent rect. 3 6
780 51.42 temperature 10.0 720 > th dose independent rect. 9 18
781 51.42 atmosphere 1000.0 30 > th dose independent rect. 9 20
787 51.42 atmosphere 1015.0 270 < th dose dependent rect. 12 11
790 51.43 humidity 50.0 270 > th dose independent rect. 3 12
791 51.43 atmosphere 1010.0 30 < th dose independent rect. 12 12
809 51.44 temperature 15.0 1440 > th dose independent rect. 6 17
810 51.44 radiation 40.0 90 < th dose dependent rect. 5 4
812 51.45 temperature 15.0 30 > th dose independent rect. 17 16
818 51.46 wind 1.0 720 > th dose independent rect. 15 4
828 51.47 precipitation 0.1 720 < th dose independent rect. 24 3
830 51.47 wind 7.0 720 < th dose independent rect. 21 10
834 51.47 humidity 90.0 10 < th dose independent rect. 12 23
835 51.47 precipitation 0.1 720 < th dose dependent rect. 24 3
855 51.49 temperature 25.0 270 < th dose independent rect. 16 15
862 51.50 atmosphere 995.0 270 > th dose independent rect. 3 12
863 51.50 humidity 60.0 30 > th dose independent rect. 5 13
864 51.50 humidity 90.0 720 < th dose dependent rect. 12 1
868 51.51 atmosphere 995.0 270 > th dose independent rect. 7 12
879 51.52 temperature 10.0 720 > th dose independent rect. 15 6
886 51.52 temperature 10.0 720 > th dose independent rect. 21 18
907 51.53 temperature 10.0 720 > th dose independent rect. 24 3
908 51.53 temperature 30.0 720 < th dose independent rect. 24 3
909 51.53 humidity 50.0 720 > th dose independent rect. 24 3
913 51.53 radiation 1.0 720 < th dose independent rect. 24 3
919 51.53 humidity 90.0 10 < th dose independent rect. 19 14
922 51.53 temperature 10.0 720 > th dose independent rect. 3 21
923 51.53 radiation 1.0 720 < th dose dependent rect. 24 3
928 51.53 atmosphere 1005.0 270 > th dose dependent rect. 3 4
935 51.54 humidity 50.0 720 > th dose independent rect. 17 10
939 51.54 wind 1.0 270 > th dose independent rect. 3 13
945 51.55 wind 9.0 720 < th dose independent rect. 24 3
949 51.55 temperature 30.0 270 < th dose independent rect. 19 12
950 51.55 humidity 50.0 270 > th dose independent rect. 19 12
952 51.55 atmosphere 1015.0 270 < th dose independent rect. 7 12
961 51.56 humidity 90.0 720 < th dose dependent rect. 14 1
979 51.57 wind 9.0 720 < th dose independent rect. 10 14