Os07g0469800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0469800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 187.76 | 0.644 | 3.06 | -0.294 | 0.206 | 16.8 | 0.579 | -58.8 | -0.081 | 18.7 | 0.2677 | 62 | -- | -- |
| 195.72 | 0.652 | 2.95 | 0.0611 | 0.141 | 4.09 | -1.06 | -- | -0.00893 | 16.9 | 1.5 | 155 | -- | -- |
| 188.25 | 0.639 | 3.05 | -0.299 | 0.213 | 16.8 | -- | -59 | -0.0742 | 17.9 | 0.363 | 61 | -- | -- |
| 190.14 | 0.642 | 2.96 | 0.0151 | 0.183 | 3.28 | -- | -- | -0.0804 | 17.8 | 1.5 | 91 | -- | -- |
| 190.37 | 0.643 | 3.05 | -0.306 | -- | 17.1 | -- | -59.5 | -0.0823 | -- | 0.4068 | 61 | -- | -- |
| 201.59 | 0.666 | 2.96 | 0.0684 | 0.219 | -- | 0.729 | -- | -0.0949 | 18.6 | -- | -- | -- | -- |
| 202.82 | 0.667 | 2.96 | 0.0589 | 0.227 | -- | -- | -- | -0.092 | 17.9 | -- | -- | -- | -- |
| 191.84 | 0.645 | 2.96 | 0.0129 | -- | 3.39 | -- | -- | -0.0879 | -- | 1.5 | 94 | -- | -- |
| 190.15 | 0.642 | 2.96 | -- | 0.181 | 3.29 | -- | -- | -0.0854 | 17.7 | 1.5 | 85 | -- | -- |
| 205.5 | 0.67 | 2.96 | 0.052 | -- | -- | -- | -- | -0.0972 | -- | -- | -- | -- | -- |
| 202.91 | 0.666 | 2.96 | -- | 0.226 | -- | -- | -- | -0.0985 | 17.9 | -- | -- | -- | -- |
| 191.84 | 0.645 | 2.96 | -- | -- | 3.39 | -- | -- | -0.0893 | -- | 1.5 | 87 | -- | -- |
| 205.57 | 0.669 | 2.96 | -- | -- | -- | -- | -- | -0.103 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 182.67 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 16 | 6 |
| 2 | 183.22 | wind | 9.0 | 30 | > th | dose dependent | rect. | 11 | 1 |
| 4 | 183.29 | wind | 9.0 | 30 | > th | dose dependent | rect. | 1 | 11 |
| 12 | 183.42 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 16 | 1 |
| 42 | 185.50 | atmosphere | 1000.0 | 90 | < th | dose dependent | rect. | 16 | 1 |
| 43 | 185.62 | wind | 9.0 | 30 | > th | dose dependent | sin | 7 | NA |
| 47 | 186.06 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 17 | 1 |
| 48 | 186.12 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 17 | 1 |
| 49 | 186.17 | wind | 9.0 | 30 | > th | dose independent | rect. | 11 | 1 |
| 51 | 186.41 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 17 | 1 |
| 79 | 186.41 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 17 | 1 |
| 116 | 186.83 | wind | 9.0 | 30 | > th | dose independent | rect. | 1 | 11 |
| 124 | 186.87 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 16 | 12 |
| 147 | 187.11 | atmosphere | 1000.0 | 270 | < th | dose dependent | rect. | 16 | 3 |
| 241 | 188.02 | wind | 9.0 | 30 | < th | dose independent | sin | 6 | NA |
| 252 | 188.17 | precipitation | 0.1 | 10 | > th | dose independent | sin | 20 | NA |
| 253 | 188.17 | precipitation | 0.1 | 10 | > th | dose dependent | sin | 20 | NA |
| 257 | 188.19 | radiation | 10.0 | 10 | < th | dose independent | rect. | 12 | 1 |
| 272 | 188.35 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 20 | 22 |
| 278 | 188.37 | atmosphere | 1000.0 | 90 | < th | dose dependent | rect. | 16 | 6 |
| 308 | 188.55 | precipitation | 0.1 | 10 | < th | dose independent | sin | 19 | NA |
| 309 | 188.55 | precipitation | 0.1 | 10 | < th | dose dependent | sin | 19 | NA |
| 310 | 188.57 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 17 | 7 |
| 330 | 188.57 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 17 | 7 |
| 390 | 188.58 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 1 | 17 |
| 460 | 188.75 | precipitation | 0.1 | 90 | > th | dose dependent | sin | 16 | NA |
| 510 | 189.04 | wind | 9.0 | 30 | > th | dose independent | sin | 6 | NA |
| 739 | 190.26 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 16 | 12 |
| 741 | 190.28 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 764 | 190.42 | precipitation | 0.1 | 90 | > th | dose dependent | no | NA | NA |
| 767 | 190.42 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 1 | 23 |
| 768 | 190.42 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 3 | 23 |
| 794 | 190.56 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 17 | 1 |
| 841 | 190.77 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 3 | 21 |
| 870 | 191.14 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 16 | 10 |
| 882 | 191.27 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 9 | 4 |
| 924 | 191.73 | precipitation | 0.1 | 90 | < th | dose independent | sin | 18 | NA |
| 927 | 191.73 | precipitation | 0.1 | 90 | < th | dose dependent | sin | 18 | NA |
| 931 | 191.77 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 20 | 22 |
| 936 | 191.80 | atmosphere | 1005.0 | 1440 | < th | dose independent | rect. | 22 | 2 |
| 939 | 191.81 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 1 | 17 |
| 949 | 191.90 | precipitation | 0.1 | 90 | > th | dose independent | sin | 17 | NA |
| 961 | 192.01 | atmosphere | 1005.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 981 | 192.23 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 18 | 1 |
| 1000 | 192.34 | wind | 1.0 | 1440 | < th | dose independent | rect. | 16 | 1 |