Os07g0463500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Thioesterase superfamily domain containing protein.
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Os07g0463500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Thioesterase superfamily domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 66.9 | 0.384 | 9.69 | -0.297 | 1.3 | 1.82 | 0.171 | 1.42 | 0.201 | 4.34 | 20.85 | 3746 | -- | -- |
| 69.25 | 0.388 | 9.68 | -0.106 | 1.34 | 1.61 | 0.189 | -- | 0.27 | 4.33 | 21.53 | 3640 | -- | -- |
| 66.98 | 0.381 | 9.69 | -0.3 | 1.3 | 1.8 | -- | 1.39 | 0.201 | 4.34 | 20.92 | 3746 | -- | -- |
| 67.81 | 0.384 | 9.65 | -0.226 | 1.3 | 1.34 | -- | -- | 0.232 | 4.35 | 21.72 | 3679 | -- | -- |
| 154.54 | 0.582 | 9.7 | -0.602 | -- | 1.76 | -- | 0.927 | 0.114 | -- | 20.92 | 3746 | -- | -- |
| 88.97 | 0.442 | 9.71 | -0.857 | 1.27 | -- | 0.257 | -- | -0.0329 | 4.46 | -- | -- | -- | -- |
| 89.15 | 0.442 | 9.71 | -0.859 | 1.27 | -- | -- | -- | -0.0343 | 4.46 | -- | -- | -- | -- |
| 107.13 | 0.482 | 9.66 | -0.362 | -- | 1.97 | -- | -- | 0.301 | -- | 31.96 | 176 | -- | -- |
| 68.69 | 0.386 | 9.64 | -- | 1.3 | 1.49 | -- | -- | 0.28 | 4.34 | 21.65 | 3748 | -- | -- |
| 175.28 | 0.619 | 9.72 | -0.809 | -- | -- | -- | -- | -0.000793 | -- | -- | -- | -- | -- |
| 108.58 | 0.487 | 9.69 | -- | 1.25 | -- | -- | -- | 0.0614 | 4.48 | -- | -- | -- | -- |
| 110.5 | 0.49 | 9.64 | -- | -- | 2.09 | -- | -- | 0.351 | -- | 32.01 | 169 | -- | -- |
| 192.55 | 0.648 | 9.7 | -- | -- | -- | -- | -- | 0.089 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 65.44 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 5 |
| 2 | 65.59 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 5 |
| 9 | 66.12 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 9 |
| 11 | 66.15 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 8 |
| 48 | 66.75 | temperature | 20 | 1440 | > th | dose independent | sin | 4 | NA |
| 49 | 66.76 | temperature | 20 | 1440 | < th | dose independent | sin | 4 | NA |
| 80 | 67.06 | humidity | 50 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 87 | 67.12 | temperature | 20 | 4320 | < th | dose independent | rect. | 6 | 20 |
| 98 | 67.17 | temperature | 20 | 4320 | > th | dose independent | rect. | 6 | 21 |
| 106 | 67.22 | wind | 3 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 116 | 67.26 | temperature | 20 | 4320 | > th | dose independent | rect. | 8 | 20 |
| 128 | 67.31 | temperature | 20 | 4320 | < th | dose independent | rect. | 8 | 20 |
| 153 | 67.43 | temperature | 20 | 4320 | < th | dose independent | rect. | 2 | 19 |
| 154 | 67.44 | temperature | 20 | 4320 | > th | dose independent | sin | 1 | NA |
| 163 | 67.46 | temperature | 20 | 4320 | < th | dose independent | sin | 1 | NA |
| 164 | 67.46 | temperature | 20 | 4320 | > th | dose independent | rect. | 2 | 18 |
| 190 | 67.53 | temperature | 20 | 4320 | > th | dose independent | rect. | 5 | 14 |
| 200 | 67.57 | temperature | 20 | 4320 | < th | dose independent | rect. | 5 | 15 |
| 245 | 67.65 | temperature | 20 | 4320 | > th | dose independent | rect. | 3 | 21 |
| 339 | 67.83 | temperature | 20 | 4320 | < th | dose independent | no | NA | NA |
| 344 | 67.85 | temperature | 20 | 4320 | > th | dose independent | no | NA | NA |
| 352 | 67.88 | humidity | 90 | 43200 | < th | dose independent | rect. | 4 | 2 |
| 363 | 67.89 | temperature | 20 | 4320 | < th | dose independent | rect. | 15 | 23 |
| 372 | 67.91 | temperature | 20 | 4320 | > th | dose independent | rect. | 15 | 23 |
| 394 | 67.95 | temperature | 20 | 4320 | < th | dose dependent | rect. | 5 | 6 |
| 441 | 68.04 | temperature | 20 | 4320 | < th | dose independent | rect. | 11 | 23 |
| 469 | 68.11 | temperature | 20 | 4320 | < th | dose independent | sin | 18 | NA |
| 481 | 68.14 | temperature | 20 | 4320 | > th | dose independent | sin | 18 | NA |
| 523 | 68.21 | temperature | 20 | 4320 | < th | dose dependent | rect. | 3 | 20 |
| 540 | 68.24 | humidity | 50 | 43200 | > th | dose dependent | rect. | 21 | 2 |
| 545 | 68.25 | temperature | 20 | 1440 | < th | dose dependent | rect. | 3 | 4 |
| 550 | 68.26 | temperature | 20 | 1440 | < th | dose dependent | rect. | 24 | 7 |
| 557 | 68.27 | humidity | 50 | 43200 | > th | dose dependent | rect. | 21 | 5 |
| 588 | 68.32 | temperature | 20 | 4320 | < th | dose dependent | sin | 2 | NA |
| 677 | 68.43 | temperature | 25 | 1440 | < th | dose dependent | rect. | 6 | 2 |
| 711 | 68.47 | humidity | 70 | 43200 | > th | dose dependent | rect. | 18 | 9 |
| 714 | 68.47 | temperature | 20 | 4320 | < th | dose dependent | rect. | 19 | 19 |
| 725 | 68.48 | humidity | 60 | 43200 | > th | dose dependent | rect. | 17 | 13 |
| 754 | 68.50 | humidity | 50 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 788 | 68.52 | temperature | 20 | 4320 | < th | dose dependent | no | NA | NA |
| 811 | 68.53 | temperature | 20 | 4320 | < th | dose dependent | rect. | 13 | 23 |
| 833 | 68.54 | temperature | 20 | 4320 | < th | dose dependent | rect. | 8 | 23 |
| 961 | 68.65 | humidity | 60 | 43200 | > th | dose dependent | sin | 12 | NA |