Os07g0461600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to TA7 protein (Fragment).
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Os07g0461600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to TA7 protein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 15.74 | 0.186 | 10.1 | 0.0384 | 0.121 | 0.306 | 0.0914 | 1.86 | -0.0497 | 22.3 | 11.2 | 4894 | -- | -- |
| 17.24 | 0.193 | 10.2 | -0.344 | 0.124 | 0.262 | 0.135 | -- | -0.103 | 21.8 | 27.7 | 4366 | -- | -- |
| 15.76 | 0.185 | 10.1 | 0.0448 | 0.12 | 0.309 | -- | 1.9 | -0.0477 | 22.4 | 10.5 | 5004 | -- | -- |
| 17.3 | 0.194 | 10.2 | -0.349 | 0.123 | 0.261 | -- | -- | -0.103 | 22.2 | 27.77 | 4369 | -- | -- |
| 16.58 | 0.19 | 10.1 | 0.0388 | -- | 0.339 | -- | 1.95 | -0.0499 | -- | 9.122 | 5112 | -- | -- |
| 19.55 | 0.207 | 10.2 | -0.271 | 0.136 | -- | 0.134 | -- | -0.12 | 22.3 | -- | -- | -- | -- |
| 19.62 | 0.207 | 10.2 | -0.276 | 0.135 | -- | -- | -- | -0.121 | 22.5 | -- | -- | -- | -- |
| 18.19 | 0.199 | 10.2 | -0.351 | -- | 0.278 | -- | -- | -0.1 | -- | 27.75 | 3928 | -- | -- |
| 20.28 | 0.21 | 10.2 | -- | 0.121 | 0.19 | -- | -- | -0.0565 | 22.3 | 29.1 | 4364 | -- | -- |
| 20.74 | 0.213 | 10.2 | -0.274 | -- | -- | -- | -- | -0.12 | -- | -- | -- | -- | -- |
| 21.63 | 0.218 | 10.2 | -- | 0.133 | -- | -- | -- | -0.0901 | 22.4 | -- | -- | -- | -- |
| 21.18 | 0.214 | 10.2 | -- | -- | 0.207 | -- | -- | -0.0515 | -- | 29.6 | 4015 | -- | -- |
| 22.71 | 0.222 | 10.2 | -- | -- | -- | -- | -- | -0.0899 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 15.35 | temperature | 15 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 3 | 15.39 | temperature | 30 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 6 | 15.43 | temperature | 30 | 4320 | < th | dose dependent | rect. | 18 | 3 |
| 122 | 15.66 | temperature | 10 | 4320 | > th | dose dependent | sin | 17 | NA |
| 213 | 15.72 | temperature | 30 | 4320 | < th | dose dependent | sin | 16 | NA |
| 377 | 15.80 | temperature | 10 | 4320 | > th | dose dependent | rect. | 17 | 21 |
| 385 | 15.81 | wind | 1 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 421 | 15.82 | temperature | 10 | 4320 | > th | dose dependent | no | NA | NA |
| 451 | 15.82 | temperature | 10 | 4320 | > th | dose dependent | rect. | 13 | 22 |
| 467 | 15.82 | temperature | 10 | 4320 | > th | dose dependent | rect. | 24 | 23 |
| 486 | 15.83 | temperature | 30 | 4320 | < th | dose dependent | rect. | 16 | 19 |
| 565 | 15.85 | wind | 1 | 14400 | < th | dose dependent | rect. | 10 | 1 |
| 792 | 15.91 | temperature | 30 | 4320 | < th | dose dependent | no | NA | NA |
| 794 | 15.91 | humidity | 70 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 834 | 15.91 | temperature | 30 | 4320 | < th | dose dependent | rect. | 1 | 23 |
| 921 | 15.93 | temperature | 30 | 4320 | < th | dose dependent | rect. | 20 | 23 |
| 951 | 15.95 | wind | 1 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 974 | 15.96 | wind | 1 | 14400 | > th | dose independent | rect. | 10 | 1 |