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Os07g0459200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Possible kinase.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.1 (0.0126) R2 : 0.0419
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.118 (0.0264) R2dN8 : 0.054 R2N8 : 0.0419
σ : 0.236
deviance : 25.65
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
19.71 0.209 10.2 -0.199 0.335 -0.181 -0.68 0.304 0.1 15.8 5.09 69 -- --
19.8 0.207 10.1 -0.205 0.322 -0.257 -0.594 -- 0.105 15.8 5.847 89 -- --
20.81 0.212 10.1 -0.2 0.288 -0.173 -- 0.0335 0.107 15.8 5.9 93 -- --
20.77 0.212 10.1 -0.208 0.299 -0.205 -- -- 0.102 15.8 5.9 89 -- --
23.74 0.227 10.1 -0.208 -- -0.239 -- 0.0468 0.119 -- 4.085 1059 -- --
20.87 0.214 10.1 -0.155 0.252 -- -0.444 -- 0.108 15.8 -- -- -- --
21.45 0.217 10.1 -0.161 0.249 -- -- -- 0.106 15.8 -- -- -- --
23.71 0.227 10.1 -0.238 -- -0.267 -- -- 0.107 -- 4.1 1078 -- --
21.78 0.217 10.1 -- 0.29 -0.141 -- -- 0.122 15.7 5.9 89 -- --
24.87 0.233 10.1 -0.171 -- -- -- -- 0.0989 -- -- -- -- --
22.14 0.22 10.1 -- 0.252 -- -- -- 0.124 15.8 -- -- -- --
24.89 0.233 10.1 -- -- 0.102 -- -- 0.12 -- 4.099 1077 -- --
25.65 0.236 10.1 -- -- -- -- -- 0.118 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 18.01 wind 5.0 90 < th dose independent rect. 7 19
4 18.07 humidity 80.0 270 < th dose independent rect. 8 2
6 18.15 temperature 20.0 270 > th dose independent rect. 11 9
10 18.16 wind 7.0 270 < th dose independent rect. 5 21
11 18.17 wind 9.0 90 < th dose dependent rect. 7 19
15 18.23 wind 7.0 270 < th dose dependent rect. 7 4
31 18.32 humidity 90.0 270 < th dose dependent rect. 8 1
39 18.36 wind 7.0 10 < th dose independent rect. 8 18
44 18.38 wind 5.0 270 < th dose independent rect. 7 3
77 18.48 wind 7.0 270 < th dose independent rect. 6 16
84 18.50 radiation 1.0 270 > th dose independent rect. 7 3
85 18.50 radiation 1.0 270 > th dose independent rect. 6 5
90 18.50 humidity 90.0 270 < th dose dependent rect. 7 3
98 18.52 temperature 30.0 270 < th dose dependent rect. 2 3
108 18.54 wind 7.0 10 < th dose independent rect. 7 22
110 18.54 radiation 10.0 270 < th dose dependent sin 8 NA
125 18.56 radiation 1.0 270 < th dose dependent rect. 2 11
149 18.60 temperature 15.0 270 > th dose independent rect. 6 5
155 18.60 wind 7.0 10 < th dose dependent rect. 8 5
162 18.62 wind 7.0 270 < th dose independent rect. 20 15
170 18.63 atmosphere 995.0 270 > th dose dependent rect. 7 3
177 18.64 atmosphere 1015.0 270 < th dose independent rect. 11 19
185 18.65 wind 1.0 270 > th dose independent rect. 1 5
186 18.65 radiation 1.0 270 < th dose independent rect. 2 11
194 18.66 wind 1.0 270 > th dose independent rect. 11 19
196 18.66 wind 1.0 270 > th dose independent rect. 10 21
209 18.67 atmosphere 1015.0 270 < th dose independent rect. 10 21
213 18.68 atmosphere 995.0 270 > th dose dependent rect. 6 5
229 18.70 temperature 15.0 270 > th dose independent rect. 7 3
240 18.70 atmosphere 995.0 90 > th dose dependent rect. 7 19
241 18.71 radiation 1.0 270 < th dose independent sin 7 NA
256 18.72 wind 7.0 270 < th dose independent rect. 16 10
327 18.77 wind 1.0 270 > th dose independent rect. 3 1
334 18.77 radiation 1.0 270 < th dose dependent sin 3 NA
343 18.78 atmosphere 995.0 270 > th dose independent rect. 11 19
358 18.79 wind 5.0 270 < th dose independent rect. 2 4
360 18.79 precipitation 0.1 270 < th dose independent rect. 6 5
368 18.79 precipitation 0.1 270 < th dose independent rect. 6 20
372 18.79 precipitation 0.1 270 < th dose dependent rect. 6 5
379 18.79 precipitation 0.1 270 < th dose dependent rect. 6 20
382 18.80 radiation 10.0 270 > th dose independent sin 10 NA
383 18.80 precipitation 0.1 270 < th dose independent rect. 7 3
390 18.80 precipitation 0.1 270 < th dose dependent rect. 7 3
400 18.81 atmosphere 995.0 270 > th dose independent rect. 6 5
401 18.81 atmosphere 1015.0 270 < th dose independent rect. 6 5
409 18.81 atmosphere 1010.0 90 < th dose independent rect. 13 18
410 18.81 temperature 10.0 270 > th dose independent rect. 11 19
412 18.81 temperature 10.0 270 > th dose dependent rect. 7 3
422 18.82 atmosphere 995.0 270 > th dose independent rect. 7 3
423 18.82 atmosphere 1015.0 270 < th dose independent rect. 7 3
429 18.82 temperature 10.0 270 > th dose independent rect. 10 21
430 18.82 atmosphere 995.0 270 > th dose independent rect. 10 21
433 18.82 humidity 90.0 10 < th dose dependent rect. 8 4
442 18.83 humidity 80.0 10 < th dose independent rect. 8 4
446 18.83 temperature 15.0 1440 > th dose independent rect. 3 5
457 18.83 atmosphere 995.0 10 > th dose dependent rect. 8 18
460 18.84 radiation 1.0 270 > th dose independent sin 5 NA
461 18.84 radiation 1.0 270 < th dose independent sin 4 NA
462 18.84 humidity 50.0 270 > th dose independent rect. 7 3
489 18.85 temperature 30.0 270 < th dose independent rect. 7 3
508 18.86 atmosphere 1010.0 270 < th dose independent rect. 2 4
509 18.86 precipitation 0.1 270 < th dose independent rect. 2 4
521 18.86 radiation 1.0 270 < th dose dependent rect. 2 4
522 18.86 precipitation 0.1 270 < th dose dependent rect. 2 4
538 18.87 atmosphere 1005.0 270 > th dose independent rect. 7 3
544 18.87 temperature 30.0 270 < th dose independent rect. 6 5
545 18.87 humidity 50.0 270 > th dose independent rect. 6 5
562 18.88 wind 5.0 90 < th dose independent rect. 7 11
564 18.88 radiation 1.0 30 > th dose independent rect. 12 19
565 18.88 precipitation 0.1 270 < th dose independent rect. 11 19
577 18.88 wind 9.0 90 < th dose dependent rect. 7 12
580 18.88 precipitation 0.1 270 < th dose dependent rect. 11 19
585 18.89 temperature 10.0 270 > th dose independent rect. 2 4
587 18.89 temperature 30.0 270 < th dose independent rect. 2 4
588 18.89 humidity 50.0 270 > th dose independent rect. 2 4
591 18.89 atmosphere 995.0 270 > th dose independent rect. 2 4
593 18.89 radiation 20.0 270 < th dose independent rect. 2 4
601 18.89 wind 1.0 270 > th dose independent rect. 2 15
604 18.89 radiation 40.0 90 < th dose independent rect. 13 18
607 18.89 temperature 10.0 270 > th dose independent rect. 6 20
616 18.89 radiation 30.0 270 < th dose dependent rect. 2 4
647 18.90 atmosphere 1015.0 270 < th dose independent rect. 11 10
664 18.90 temperature 10.0 270 > th dose dependent rect. 6 5
665 18.90 atmosphere 995.0 90 > th dose dependent rect. 7 7
693 18.91 atmosphere 995.0 270 > th dose independent rect. 11 9
715 18.92 radiation 1.0 270 < th dose independent rect. 2 3
723 18.92 atmosphere 1010.0 270 < th dose independent rect. 22 9
724 18.92 temperature 20.0 30 > th dose independent rect. 12 11
729 18.92 precipitation 0.1 270 < th dose independent rect. 10 21
744 18.92 wind 9.0 270 < th dose dependent rect. 20 15
749 18.92 precipitation 0.1 270 < th dose dependent rect. 10 21
776 18.94 radiation 10.0 10 < th dose independent sin 5 NA
847 18.96 temperature 10.0 270 > th dose independent rect. 11 9
851 18.96 precipitation 0.1 270 < th dose independent rect. 16 10
852 18.96 temperature 10.0 270 > th dose independent rect. 20 15
853 18.96 atmosphere 995.0 270 > th dose independent rect. 20 15
869 18.96 precipitation 0.1 270 < th dose dependent rect. 16 10
875 18.97 wind 5.0 10 < th dose independent rect. 2 6
887 18.97 radiation 40.0 270 < th dose independent rect. 6 20
890 18.97 wind 7.0 270 < th dose independent rect. 14 23
914 18.98 radiation 10.0 270 < th dose independent rect. 22 9
932 18.98 atmosphere 1015.0 10 < th dose independent rect. 12 20
933 18.98 wind 9.0 270 < th dose dependent rect. 2 4
965 18.99 precipitation 0.1 10 < th dose independent rect. 2 6
983 18.99 atmosphere 995.0 90 > th dose independent rect. 7 19
996 18.99 precipitation 0.1 10 < th dose dependent rect. 2 6