Os07g0458800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ribosomal protein S16 family protein.
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Os07g0458800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ribosomal protein S16 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 23.9 | 0.23 | 8.85 | -0.749 | 0.214 | 0.242 | -0.243 | -0.409 | -0.0895 | 9.82 | 21.1 | 2614 | -- | -- |
| 24.23 | 0.229 | 8.83 | -0.661 | 0.206 | 0.286 | -0.174 | -- | -0.0602 | 9.73 | 20.2 | 2652 | -- | -- |
| 24.11 | 0.229 | 8.85 | -0.756 | 0.212 | 0.245 | -- | -0.396 | -0.0898 | 9.99 | 21 | 2666 | -- | -- |
| 24.37 | 0.23 | 8.83 | -0.685 | 0.208 | 0.324 | -- | -- | -0.0634 | 10 | 19.9 | 2726 | -- | -- |
| 26.63 | 0.24 | 8.86 | -0.755 | -- | 0.249 | -- | -0.401 | -0.0851 | -- | 20.2 | 2932 | -- | -- |
| 26.21 | 0.24 | 8.82 | -0.505 | 0.204 | -- | -0.238 | -- | 0.0151 | 9.48 | -- | -- | -- | -- |
| 26.41 | 0.241 | 8.82 | -0.513 | 0.204 | -- | -- | -- | 0.0151 | 9.72 | -- | -- | -- | -- |
| 26.89 | 0.242 | 8.84 | -0.695 | -- | 0.331 | -- | -- | -0.0659 | -- | 19.87 | 2944 | -- | -- |
| 27.66 | 0.245 | 8.76 | -- | 0.178 | -0.357 | -- | -- | 0.204 | 10.2 | 22.2 | 47520 | -- | -- |
| 28.89 | 0.251 | 8.82 | -0.515 | -- | -- | -- | -- | 0.0154 | -- | -- | -- | -- | -- |
| 33.36 | 0.27 | 8.8 | -- | 0.206 | -- | -- | -- | 0.0723 | 9.91 | -- | -- | -- | -- |
| 29.47 | 0.253 | 8.78 | -- | -- | -0.367 | -- | -- | 0.219 | -- | 26.46 | 47520 | -- | -- |
| 35.9 | 0.28 | 8.81 | -- | -- | -- | -- | -- | 0.0726 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 22.33 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 23 | 7 |
| 2 | 22.33 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 22 | 8 |
| 7 | 22.40 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 13 | 22.45 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 4 | 2 |
| 24 | 22.49 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 1 | 2 |
| 25 | 22.49 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 1 | 5 |
| 33 | 22.50 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 5 |
| 39 | 22.53 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 2 |
| 82 | 22.65 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 17 | 19 |
| 90 | 22.67 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 17 | 19 |
| 119 | 22.71 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 22 | 4 |
| 121 | 22.72 | wind | 1.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 126 | 22.72 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 15 | 18 |
| 139 | 22.74 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 157 | 22.77 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 12 | 18 |
| 166 | 22.79 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 174 | 22.80 | wind | 1.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 175 | 22.80 | atmosphere | 995.0 | 43200 | < th | dose dependent | sin | 15 | NA |
| 198 | 22.83 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 199 | 22.83 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 202 | 22.84 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 254 | 22.89 | atmosphere | 995.0 | 43200 | > th | dose independent | sin | 6 | NA |
| 290 | 22.92 | atmosphere | 995.0 | 43200 | < th | dose independent | sin | 10 | NA |
| 291 | 22.92 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 21 | 18 |
| 305 | 22.93 | atmosphere | 995.0 | 43200 | > th | dose independent | sin | 10 | NA |
| 306 | 22.93 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 21 | 18 |
| 315 | 22.94 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 317 | 22.94 | wind | 1.0 | 43200 | > th | dose dependent | sin | 8 | NA |
| 318 | 22.94 | wind | 7.0 | 43200 | < th | dose dependent | sin | 8 | NA |
| 321 | 22.94 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 348 | 22.96 | wind | 3.0 | 43200 | > th | dose independent | rect. | 23 | 7 |
| 379 | 22.98 | wind | 3.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 389 | 22.99 | wind | 3.0 | 43200 | < th | dose independent | rect. | 22 | 10 |
| 396 | 23.00 | atmosphere | 995.0 | 43200 | < th | dose independent | sin | 5 | NA |
| 397 | 23.00 | wind | 3.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 398 | 23.00 | wind | 3.0 | 43200 | < th | dose independent | rect. | 23 | 7 |
| 399 | 23.00 | wind | 3.0 | 43200 | > th | dose independent | rect. | 22 | 10 |
| 409 | 23.00 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 13 | 13 |
| 413 | 23.01 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 5 |
| 429 | 23.02 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 430 | 23.02 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 431 | 23.02 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 9 | 5 |
| 454 | 23.04 | wind | 1.0 | 14400 | < th | dose independent | rect. | 23 | 3 |
| 455 | 23.04 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 5 |
| 466 | 23.05 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 468 | 23.05 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 7 |
| 504 | 23.07 | wind | 3.0 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 521 | 23.08 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 4 |
| 525 | 23.08 | atmosphere | 995.0 | 43200 | < th | dose dependent | sin | 11 | NA |
| 568 | 23.10 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 11 |
| 575 | 23.10 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 593 | 23.11 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 599 | 23.11 | wind | 3.0 | 43200 | > th | dose independent | rect. | 3 | 9 |
| 640 | 23.13 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 9 |
| 643 | 23.13 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 11 |
| 653 | 23.13 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 16 | 10 |
| 663 | 23.14 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 672 | 23.14 | wind | 3.0 | 43200 | < th | dose independent | rect. | 23 | 13 |
| 713 | 23.15 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 8 |
| 721 | 23.16 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 722 | 23.16 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 7 | 3 |
| 761 | 23.17 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 7 | 5 |
| 770 | 23.17 | atmosphere | 995.0 | 43200 | < th | dose dependent | no | NA | NA |
| 775 | 23.17 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 7 | 3 |
| 776 | 23.17 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 7 | 5 |
| 798 | 23.17 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 21 | 22 |
| 799 | 23.17 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 1 | 23 |
| 832 | 23.18 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 22 | 20 |
| 840 | 23.19 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 872 | 23.20 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 7 | 3 |
| 880 | 23.20 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 21 | 14 |
| 887 | 23.20 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 7 | 3 |
| 911 | 23.21 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 919 | 23.21 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 17 | 8 |
| 926 | 23.22 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 7 | 5 |
| 930 | 23.22 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 9 |
| 946 | 23.22 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 7 | 5 |
| 961 | 23.23 | wind | 9.0 | 14400 | > th | dose independent | rect. | 6 | 5 |
| 989 | 23.24 | wind | 3.0 | 43200 | > th | dose independent | sin | 7 | NA |