Os07g0458500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0458500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 34.17 | 0.275 | 9.09 | 0.0961 | 0.855 | 0.48 | -0.44 | 0.176 | 0.0767 | 22.4 | 20.6 | 1513 | -- | -- |
| 34.25 | 0.273 | 9.09 | 0.085 | 0.859 | 0.46 | -0.423 | -- | 0.0767 | 22.4 | 20.7 | 1516 | -- | -- |
| 34.95 | 0.275 | 9.09 | 0.117 | 0.858 | 0.469 | -- | 0.177 | 0.0776 | 22.4 | 20.73 | 1515 | -- | -- |
| 35 | 0.276 | 9.09 | 0.0853 | 0.858 | 0.453 | -- | -- | 0.0719 | 22.4 | 20.6 | 1472 | -- | -- |
| 69.38 | 0.388 | 9.04 | 0.35 | -- | 0.493 | -- | 0.527 | 0.187 | -- | 24.9 | 749 | -- | -- |
| 38.93 | 0.293 | 9.07 | 0.252 | 0.858 | -- | -0.416 | -- | 0.176 | 22.4 | -- | -- | -- | -- |
| 39.64 | 0.295 | 9.07 | 0.269 | 0.86 | -- | -- | -- | 0.178 | 22.4 | -- | -- | -- | -- |
| 66.5 | 0.38 | 9.05 | 0.0526 | -- | 0.647 | -- | -- | 0.0908 | -- | 24.91 | 767 | -- | -- |
| 35.15 | 0.276 | 9.09 | -- | 0.857 | 0.487 | -- | -- | 0.0564 | 22.4 | 20.6 | 1472 | -- | -- |
| 84.91 | 0.431 | 9.04 | 0.284 | -- | -- | -- | -- | 0.181 | -- | -- | -- | -- | -- |
| 41.55 | 0.302 | 9.07 | -- | 0.862 | -- | -- | -- | 0.148 | 22.4 | -- | -- | -- | -- |
| 64.69 | 0.375 | 9.1 | -- | -- | 0.686 | -- | -- | -0.0763 | -- | 24.92 | 795 | -- | -- |
| 87.03 | 0.435 | 9.05 | -- | -- | -- | -- | -- | 0.149 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 32.09 | wind | 9.0 | 14400 | < th | dose independent | rect. | 5 | 7 |
| 7 | 32.44 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 2 |
| 11 | 32.49 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 14 | 32.55 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 3 |
| 15 | 32.55 | wind | 9.0 | 14400 | > th | dose independent | rect. | 7 | 4 |
| 16 | 32.55 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 4 |
| 20 | 32.58 | temperature | 20.0 | 90 | > th | dose independent | rect. | 21 | 7 |
| 22 | 32.61 | temperature | 20.0 | 10 | > th | dose independent | rect. | 21 | 8 |
| 23 | 32.62 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 24 | 32.62 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 6 |
| 25 | 32.62 | temperature | 20.0 | 270 | > th | dose independent | rect. | 18 | 10 |
| 26 | 32.62 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 27 | 32.63 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 6 |
| 35 | 32.66 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 23 | 7 |
| 48 | 32.70 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 15 | 16 |
| 52 | 32.71 | wind | 9.0 | 14400 | < th | dose independent | rect. | 1 | 12 |
| 54 | 32.72 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 58 | 32.72 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 2 |
| 61 | 32.73 | temperature | 20.0 | 90 | > th | dose independent | rect. | 11 | 17 |
| 65 | 32.75 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 23 | 7 |
| 66 | 32.76 | wind | 9.0 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 116 | 32.89 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 155 | 32.98 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 23 | 14 |
| 176 | 33.02 | temperature | 20.0 | 10 | > th | dose independent | rect. | 8 | 21 |
| 177 | 33.02 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 10 | 3 |
| 184 | 33.03 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 9 |
| 204 | 33.05 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 9 |
| 208 | 33.05 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 4 | 2 |
| 212 | 33.05 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 9 |
| 214 | 33.05 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 23 | 14 |
| 226 | 33.07 | temperature | 20.0 | 10 | > th | dose independent | rect. | 12 | 17 |
| 227 | 33.07 | temperature | 20.0 | 90 | > th | dose independent | rect. | 8 | 20 |
| 228 | 33.07 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 240 | 33.09 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 18 | 10 |
| 249 | 33.11 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 4 | 2 |
| 287 | 33.14 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 11 |
| 289 | 33.14 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 13 |
| 294 | 33.14 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 11 |
| 304 | 33.15 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 13 |
| 308 | 33.16 | wind | 3.0 | 14400 | < th | dose independent | sin | 8 | NA |
| 321 | 33.17 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 11 |
| 327 | 33.17 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 15 | 6 |
| 340 | 33.18 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 16 | 4 |
| 348 | 33.19 | wind | 3.0 | 14400 | > th | dose independent | sin | 8 | NA |
| 350 | 33.19 | wind | 3.0 | 14400 | < th | dose independent | rect. | 4 | 2 |
| 352 | 33.19 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 7 |
| 376 | 33.21 | temperature | 20.0 | 10 | > th | dose independent | rect. | 18 | 11 |
| 378 | 33.21 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 386 | 33.22 | wind | 3.0 | 14400 | > th | dose independent | rect. | 4 | 2 |
| 401 | 33.23 | temperature | 20.0 | 10 | > th | dose independent | rect. | 23 | 6 |
| 420 | 33.24 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 432 | 33.25 | wind | 1.0 | 14400 | > th | dose dependent | sin | 7 | NA |
| 433 | 33.25 | temperature | 25.0 | 270 | < th | dose dependent | sin | 15 | NA |
| 457 | 33.27 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 17 | 2 |
| 573 | 33.34 | wind | 9.0 | 14400 | < th | dose dependent | sin | 7 | NA |
| 608 | 33.36 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 11 |
| 633 | 33.39 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 6 | 7 |
| 659 | 33.41 | temperature | 25.0 | 720 | < th | dose dependent | sin | 19 | NA |
| 689 | 33.43 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 7 | 6 |
| 694 | 33.43 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 3 | 9 |
| 716 | 33.44 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 13 | 21 |
| 733 | 33.45 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 15 | 19 |
| 745 | 33.46 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 3 | 9 |
| 759 | 33.47 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 789 | 33.48 | wind | 9.0 | 14400 | > th | dose independent | rect. | 1 | 12 |
| 862 | 33.51 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 897 | 33.53 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 7 |
| 980 | 33.57 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 21 | 8 |