Os07g0457500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os07g0457500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 70.17 | 0.394 | 3.36 | 0.11 | 0.135 | -0.13 | 0.562 | -1.34 | 0.0103 | 8.7 | 70.6 | 4976 | -- | -- |
| 72.49 | 0.397 | 3.37 | 0.0388 | 0.115 | -0.178 | 0.439 | -- | -0.00648 | 8.43 | 72.92 | 4268 | -- | -- |
| 70.97 | 0.392 | 3.35 | 0.129 | 0.127 | -0.143 | -- | -1.23 | 0.0124 | 8.75 | 70 | 4447 | -- | -- |
| 72.91 | 0.398 | 3.36 | 0.0525 | 0.107 | -0.193 | -- | -- | -0.0166 | 8.24 | 71 | 4330 | -- | -- |
| 71.74 | 0.394 | 3.36 | 0.119 | -- | -0.183 | -- | -1.21 | 0.0042 | -- | 70 | 4434 | -- | -- |
| 73.36 | 0.402 | 3.35 | 0.0338 | 0.117 | -- | 0.422 | -- | 0.00911 | 8.95 | -- | -- | -- | -- |
| 73.96 | 0.403 | 3.35 | 0.0481 | 0.116 | -- | -- | -- | 0.00925 | 8.81 | -- | -- | -- | -- |
| 73.55 | 0.399 | 3.35 | 0.0414 | -- | -0.261 | -- | -- | -0.0236 | -- | 70 | 4332 | -- | -- |
| 72.83 | 0.397 | 3.36 | -- | 0.112 | -0.273 | -- | -- | -0.0288 | 8.89 | 71 | 4334 | -- | -- |
| 74.73 | 0.404 | 3.35 | 0.0482 | -- | -- | -- | -- | 0.0101 | -- | -- | -- | -- | -- |
| 74.02 | 0.402 | 3.35 | -- | 0.116 | -- | -- | -- | 0.00389 | 8.78 | -- | -- | -- | -- |
| 73.57 | 0.399 | 3.36 | -- | -- | -0.281 | -- | -- | -0.0308 | -- | 71 | 4351 | -- | -- |
| 74.79 | 0.404 | 3.36 | -- | -- | -- | -- | -- | 0.00478 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 68.38 | humidity | 60.0 | 30 | > th | dose independent | rect. | 12 | 1 |
| 2 | 68.38 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 15 | 8 |
| 3 | 68.38 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 15 | 8 |
| 4 | 68.40 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 23 | 16 |
| 5 | 68.43 | radiation | 20.0 | 30 | > th | dose independent | rect. | 12 | 1 |
| 7 | 68.49 | humidity | 80.0 | 30 | < th | dose independent | rect. | 12 | 1 |
| 8 | 68.50 | wind | 9.0 | 30 | < th | dose dependent | rect. | 12 | 1 |
| 9 | 68.55 | temperature | 20.0 | 30 | > th | dose independent | rect. | 12 | 1 |
| 11 | 68.57 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 12 | 1 |
| 12 | 68.58 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 15 | 8 |
| 13 | 68.58 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 12 | 1 |
| 14 | 68.59 | wind | 9.0 | 30 | < th | dose independent | rect. | 12 | 1 |
| 15 | 68.59 | temperature | 10.0 | 30 | > th | dose independent | rect. | 12 | 1 |
| 17 | 68.59 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 12 | 1 |
| 18 | 68.59 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 12 | 1 |
| 20 | 68.59 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 12 | 1 |
| 21 | 68.59 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 3 | 8 |
| 22 | 68.59 | temperature | 10.0 | 30 | > th | dose independent | rect. | 13 | 23 |
| 24 | 68.59 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 12 | 1 |
| 25 | 68.60 | wind | 1.0 | 30 | > th | dose independent | rect. | 12 | 1 |
| 29 | 68.61 | temperature | 30.0 | 10 | > th | dose independent | rect. | 12 | 1 |
| 35 | 68.70 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 39 | 68.70 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 42 | 68.70 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 14 | 23 |
| 45 | 68.72 | temperature | 10.0 | 720 | > th | dose independent | rect. | 15 | 8 |
| 46 | 68.72 | temperature | 10.0 | 720 | > th | dose independent | rect. | 23 | 16 |
| 47 | 68.73 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 12 | 1 |
| 48 | 68.75 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 12 | 1 |
| 50 | 68.78 | temperature | 10.0 | 720 | > th | dose independent | rect. | 3 | 8 |
| 52 | 68.78 | temperature | 10.0 | 720 | > th | dose independent | rect. | 11 | 16 |
| 53 | 68.78 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 12 | 1 |
| 54 | 68.79 | humidity | 50.0 | 720 | > th | dose independent | rect. | 3 | 8 |
| 58 | 68.91 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 11 | 16 |
| 59 | 68.91 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 12 | 1 |
| 60 | 68.91 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 11 | 16 |
| 63 | 68.94 | temperature | 30.0 | 30 | < th | dose independent | rect. | 12 | 1 |
| 64 | 68.96 | wind | 1.0 | 30 | > th | dose dependent | rect. | 12 | 1 |
| 68 | 69.06 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 70 | 69.09 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 4 | 5 |
| 77 | 69.18 | wind | 9.0 | 720 | < th | dose independent | rect. | 3 | 8 |
| 80 | 69.21 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 7 | 2 |
| 86 | 69.24 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 91 | 69.29 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 10 | 1 |
| 92 | 69.32 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 10 | 1 |
| 95 | 69.38 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 99 | 69.46 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 4 | 5 |
| 112 | 69.47 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 22 | 11 |
| 130 | 69.58 | wind | 1.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 134 | 69.58 | humidity | 70.0 | 4320 | < th | dose dependent | rect. | 11 | 2 |
| 137 | 69.59 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 11 | 1 |
| 139 | 69.60 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 6 | 3 |
| 152 | 69.60 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 4 | 4 |
| 153 | 69.61 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 8 | 4 |
| 162 | 69.66 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 8 | 4 |
| 165 | 69.66 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 4 | 8 |
| 175 | 69.66 | wind | 5.0 | 4320 | < th | dose dependent | rect. | 6 | 1 |
| 190 | 69.67 | wind | 9.0 | 4320 | < th | dose dependent | rect. | 6 | 1 |
| 196 | 69.70 | wind | 9.0 | 30 | < th | dose independent | rect. | 13 | 23 |
| 229 | 69.75 | wind | 1.0 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 232 | 69.76 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 4 |
| 236 | 69.77 | humidity | 70.0 | 4320 | > th | dose independent | sin | 6 | NA |
| 249 | 69.78 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 4 |
| 252 | 69.78 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 4 | 7 |
| 255 | 69.79 | wind | 9.0 | 720 | < th | dose independent | rect. | 15 | 8 |
| 279 | 69.83 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 3 | 8 |
| 282 | 69.84 | wind | 3.0 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 284 | 69.84 | temperature | 30.0 | 720 | < th | dose independent | rect. | 15 | 8 |
| 287 | 69.85 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 7 |
| 288 | 69.85 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 7 |
| 292 | 69.86 | humidity | 70.0 | 4320 | < th | dose independent | sin | 6 | NA |
| 393 | 69.94 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 2 | 2 |
| 405 | 69.95 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 3 | 10 |
| 407 | 69.95 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 23 | 15 |
| 422 | 69.97 | wind | 3.0 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 424 | 69.97 | temperature | 25.0 | 30 | > th | dose independent | rect. | 20 | 3 |
| 458 | 69.98 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 20 | 18 |
| 482 | 70.00 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 521 | 70.02 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 3 | 10 |
| 551 | 70.05 | wind | 3.0 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 582 | 70.06 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 13 | 23 |
| 583 | 70.06 | humidity | 90.0 | 4320 | < th | dose dependent | sin | 5 | NA |
| 654 | 70.09 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 3 | 8 |
| 669 | 70.09 | temperature | 30.0 | 10 | < th | dose independent | rect. | 3 | 23 |
| 676 | 70.09 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 3 | 8 |
| 698 | 70.10 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 6 | 5 |
| 711 | 70.11 | wind | 5.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 738 | 70.12 | wind | 7.0 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 812 | 70.14 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 23 | 15 |
| 907 | 70.18 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 20 | 3 |
| 961 | 70.20 | humidity | 50.0 | 4320 | > th | dose dependent | sin | 4 | NA |