Os07g0452700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0452700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 50.24 | 0.333 | 10.6 | 0.19 | 0.434 | 0.91 | -0.299 | 0.182 | 0.304 | 17.6 | 20.9 | 1298 | -- | -- |
| 49.75 | 0.329 | 10.7 | 0.162 | 0.422 | 0.869 | -0.316 | -- | 0.281 | 17.9 | 21.35 | 1504 | -- | -- |
| 49.8 | 0.329 | 10.6 | 0.234 | 0.437 | 0.851 | -- | 0.219 | 0.304 | 17.5 | 21.4 | 1367 | -- | -- |
| 49.64 | 0.328 | 10.7 | 0.19 | 0.425 | 0.813 | -- | -- | 0.276 | 17.7 | 21.7 | 1511 | -- | -- |
| 58.41 | 0.356 | 10.6 | 0.161 | -- | 0.856 | -- | 0.103 | 0.269 | -- | 21.5 | 1827 | -- | -- |
| 70.73 | 0.394 | 10.6 | 0.524 | 0.407 | -- | -0.28 | -- | 0.52 | 18 | -- | -- | -- | -- |
| 70.88 | 0.394 | 10.6 | 0.527 | 0.407 | -- | -- | -- | 0.52 | 17.8 | -- | -- | -- | -- |
| 58.32 | 0.356 | 10.7 | 0.135 | -- | 0.835 | -- | -- | 0.253 | -- | 21.61 | 1826 | -- | -- |
| 50.42 | 0.331 | 10.7 | -- | 0.417 | 0.884 | -- | -- | 0.234 | 17.7 | 21.6 | 1528 | -- | -- |
| 79.45 | 0.417 | 10.6 | 0.514 | -- | -- | -- | -- | 0.51 | -- | -- | -- | -- | -- |
| 78.2 | 0.414 | 10.6 | -- | 0.398 | -- | -- | -- | 0.461 | 17.9 | -- | -- | -- | -- |
| 58.73 | 0.357 | 10.7 | -- | -- | 0.875 | -- | -- | 0.227 | -- | 21.65 | 1965 | -- | -- |
| 86.43 | 0.434 | 10.6 | -- | -- | -- | -- | -- | 0.453 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 42.44 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 2 | 43.18 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 4 | 43.71 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 6 | 44.33 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 8 | 44.53 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 10 | 44.87 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 11 | 44.87 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 12 | 45.01 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 13 | 45.01 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 14 | 45.37 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 3 |
| 15 | 45.37 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 3 |
| 16 | 45.45 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 6 |
| 17 | 45.45 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 6 |
| 18 | 45.61 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 19 | 45.61 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 6 |
| 22 | 45.67 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 3 |
| 23 | 45.68 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 6 |
| 28 | 46.12 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 12 |
| 29 | 46.22 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 10 |
| 30 | 46.29 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 12 |
| 32 | 46.29 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 12 |
| 39 | 46.38 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 22 | 8 |
| 40 | 46.40 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 10 |
| 41 | 46.40 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 10 |
| 45 | 46.48 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 22 | 8 |
| 48 | 46.49 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 22 | 8 |
| 49 | 46.50 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 52 | 46.56 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 9 |
| 74 | 46.87 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 23 | 2 |
| 79 | 46.91 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 23 | 3 |
| 91 | 47.03 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 102 | 47.09 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 116 | 47.28 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 21 | 5 |
| 118 | 47.29 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 143 | 47.42 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 23 | 3 |
| 169 | 47.55 | wind | 9.0 | 14400 | < th | dose independent | rect. | 5 | 7 |
| 181 | 47.65 | wind | 9.0 | 14400 | < th | dose independent | rect. | 23 | 14 |
| 194 | 47.75 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 209 | 47.84 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 215 | 47.86 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 222 | 47.90 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 241 | 47.98 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 3 |
| 243 | 47.98 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 3 |
| 250 | 48.00 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 22 | 15 |
| 252 | 48.02 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 22 | 15 |
| 255 | 48.03 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 21 | 14 |
| 256 | 48.04 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 3 |
| 257 | 48.04 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 3 |
| 262 | 48.07 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 10 | 3 |
| 300 | 48.19 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 5 |
| 347 | 48.32 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 12 |
| 348 | 48.33 | wind | 9.0 | 14400 | > th | dose independent | rect. | 7 | 4 |
| 364 | 48.36 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 384 | 48.40 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 397 | 48.44 | wind | 5.0 | 14400 | < th | dose dependent | sin | 8 | NA |
| 419 | 48.50 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 8 |
| 420 | 48.50 | wind | 9.0 | 14400 | < th | dose independent | rect. | 2 | 11 |
| 428 | 48.53 | wind | 7.0 | 14400 | > th | dose independent | rect. | 11 | 2 |
| 431 | 48.53 | wind | 9.0 | 14400 | < th | dose dependent | sin | 8 | NA |
| 438 | 48.55 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 441 | 48.55 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 452 | 48.59 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 455 | 48.59 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 458 | 48.60 | wind | 1.0 | 14400 | > th | dose dependent | sin | 8 | NA |
| 463 | 48.61 | wind | 9.0 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 467 | 48.61 | wind | 3.0 | 14400 | < th | dose independent | rect. | 22 | 15 |
| 475 | 48.64 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 503 | 48.72 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 4 |
| 541 | 48.83 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 8 |
| 549 | 48.84 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 9 | 6 |
| 558 | 48.86 | wind | 3.0 | 14400 | < th | dose independent | rect. | 21 | 10 |
| 566 | 48.88 | wind | 1.0 | 43200 | > th | dose independent | rect. | 22 | 9 |
| 567 | 48.88 | wind | 3.0 | 14400 | > th | dose independent | rect. | 22 | 15 |
| 614 | 48.99 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 10 |
| 627 | 49.03 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 13 |
| 634 | 49.04 | wind | 3.0 | 14400 | < th | dose independent | rect. | 23 | 3 |
| 651 | 49.07 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 653 | 49.07 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 18 | 2 |
| 661 | 49.10 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 5 |
| 676 | 49.13 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 753 | 49.24 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 4 | 9 |
| 769 | 49.27 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 13 |
| 789 | 49.29 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 7 |
| 822 | 49.34 | wind | 3.0 | 14400 | < th | dose independent | sin | 8 | NA |
| 948 | 49.49 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 986 | 49.53 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 20 | 1 |