Os07g0451300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os07g0451300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 138.67 | 0.553 | 2.91 | 0.061 | 0.263 | -0.504 | 0.469 | 2.05 | 0.16 | 17.5 | 1.029 | 27 | -- | -- |
| 141.31 | 0.554 | 2.89 | 0.148 | 0.237 | -0.294 | 0.669 | -- | 0.179 | 17.2 | 1.154 | 25 | -- | -- |
| 139.02 | 0.549 | 2.91 | 0.0536 | 0.263 | -0.514 | -- | 2.3 | 0.16 | 17.9 | 1.006 | 36 | -- | -- |
| 142.16 | 0.555 | 2.89 | 0.143 | 0.252 | -0.248 | -- | -- | 0.181 | 17.8 | 1.2 | 24 | -- | -- |
| 142.08 | 0.555 | 2.91 | 0.0786 | -- | -0.349 | -- | 2.09 | 0.161 | -- | 1.016 | 36 | -- | -- |
| 143.17 | 0.561 | 2.89 | 0.189 | 0.151 | -- | 0.601 | -- | 0.169 | 17.2 | -- | -- | -- | -- |
| 143.85 | 0.562 | 2.89 | 0.188 | 0.169 | -- | -- | -- | 0.172 | 18.6 | -- | -- | -- | -- |
| 144.84 | 0.561 | 2.89 | 0.163 | -- | -0.151 | -- | -- | 0.172 | -- | 1.051 | 23 | -- | -- |
| 142.55 | 0.556 | 2.89 | -- | 0.272 | -0.259 | -- | -- | 0.173 | 17.7 | 1.4 | 24 | -- | -- |
| 145.34 | 0.563 | 2.89 | 0.184 | -- | -- | -- | -- | 0.168 | -- | -- | -- | -- | -- |
| 144.78 | 0.563 | 2.9 | -- | 0.166 | -- | -- | -- | 0.151 | 18.7 | -- | -- | -- | -- |
| 145.29 | 0.561 | 2.89 | -- | -- | -0.19 | -- | -- | 0.151 | -- | 1.002 | 16 | -- | -- |
| 146.23 | 0.564 | 2.89 | -- | -- | -- | -- | -- | 0.148 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 132.17 | wind | 1.0 | 30 | < th | dose dependent | rect. | 2 | 2 |
| 3 | 132.43 | wind | 1.0 | 30 | < th | dose independent | rect. | 2 | 2 |
| 9 | 134.55 | wind | 1.0 | 30 | < th | dose independent | rect. | 17 | 11 |
| 11 | 134.68 | wind | 1.0 | 30 | < th | dose independent | rect. | 23 | 5 |
| 18 | 134.95 | wind | 1.0 | 30 | < th | dose dependent | rect. | 17 | 11 |
| 22 | 135.03 | wind | 1.0 | 30 | < th | dose dependent | rect. | 23 | 5 |
| 55 | 136.04 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 5 | 12 |
| 62 | 136.10 | wind | 1.0 | 10 | < th | dose independent | rect. | 2 | 7 |
| 71 | 136.24 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 4 | 13 |
| 78 | 136.55 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 13 | 1 |
| 81 | 136.65 | humidity | 90.0 | 270 | > th | dose independent | rect. | 13 | 1 |
| 83 | 136.72 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 13 | 4 |
| 86 | 136.76 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 7 | 7 |
| 94 | 136.76 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 7 | 7 |
| 104 | 136.85 | wind | 1.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 105 | 136.87 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 10 | 4 |
| 113 | 136.97 | wind | 1.0 | 30 | < th | dose independent | rect. | 15 | 3 |
| 122 | 137.15 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 13 | 4 |
| 154 | 137.31 | wind | 1.0 | 90 | < th | dose dependent | rect. | 14 | 4 |
| 159 | 137.34 | humidity | 90.0 | 270 | > th | dose independent | rect. | 10 | 4 |
| 160 | 137.36 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 7 | 10 |
| 173 | 137.47 | temperature | 20.0 | 10 | > th | dose independent | rect. | 2 | 2 |
| 210 | 137.82 | wind | 1.0 | 30 | > th | dose independent | sin | 7 | NA |
| 211 | 137.86 | temperature | 20.0 | 90 | > th | dose independent | rect. | 2 | 1 |
| 212 | 137.86 | wind | 1.0 | 10 | < th | dose independent | rect. | 2 | 20 |
| 213 | 137.88 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 2 | 1 |
| 262 | 138.15 | wind | 1.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 271 | 138.20 | wind | 1.0 | 10 | < th | dose dependent | rect. | 2 | 20 |
| 308 | 138.38 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 15 |
| 311 | 138.39 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 2 | 1 |
| 322 | 138.42 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 2 | 1 |
| 323 | 138.43 | precipitation | 0.1 | 270 | < th | dose independent | sin | 2 | NA |
| 327 | 138.43 | precipitation | 0.1 | 270 | < th | dose dependent | sin | 2 | NA |
| 330 | 138.44 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 23 |
| 333 | 138.44 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 338 | 138.47 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 2 | 2 |
| 340 | 138.48 | humidity | 80.0 | 90 | > th | dose independent | rect. | 2 | 1 |
| 352 | 138.52 | humidity | 50.0 | 270 | < th | dose dependent | rect. | 14 | 2 |
| 385 | 138.55 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 15 |
| 388 | 138.57 | wind | 1.0 | 10 | > th | dose independent | rect. | 17 | 22 |
| 398 | 138.59 | wind | 1.0 | 30 | < th | dose independent | sin | 13 | NA |
| 399 | 138.59 | wind | 5.0 | 90 | < th | dose independent | rect. | 2 | 1 |
| 407 | 138.61 | humidity | 50.0 | 270 | < th | dose independent | rect. | 14 | 2 |
| 467 | 138.70 | humidity | 50.0 | 270 | < th | dose dependent | sin | 13 | NA |
| 511 | 138.76 | wind | 1.0 | 30 | < th | dose independent | rect. | 17 | 1 |
| 523 | 138.76 | radiation | 1.0 | 90 | < th | dose independent | rect. | 6 | 11 |
| 546 | 138.78 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 2 | 1 |
| 558 | 138.80 | temperature | 10.0 | 90 | > th | dose independent | rect. | 2 | 1 |
| 560 | 138.80 | temperature | 30.0 | 90 | < th | dose independent | rect. | 2 | 1 |
| 561 | 138.80 | humidity | 50.0 | 90 | > th | dose independent | rect. | 2 | 1 |
| 565 | 138.80 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 2 | 1 |
| 567 | 138.80 | radiation | 1.0 | 90 | < th | dose independent | rect. | 2 | 1 |
| 572 | 138.80 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 2 | 1 |
| 573 | 138.80 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 23 |
| 574 | 138.80 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 2 | 1 |
| 579 | 138.80 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 2 | 1 |
| 585 | 138.83 | precipitation | 0.1 | 270 | > th | dose independent | sin | 3 | NA |
| 590 | 138.83 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 2 | 2 |
| 597 | 138.85 | humidity | 50.0 | 270 | < th | dose independent | sin | 13 | NA |
| 618 | 138.86 | wind | 1.0 | 30 | > th | dose independent | no | NA | NA |
| 626 | 138.86 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 3 | 23 |
| 631 | 138.87 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 10 | 3 |
| 717 | 138.97 | humidity | 90.0 | 10 | > th | dose independent | rect. | 2 | 2 |
| 734 | 138.99 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 4 | 22 |
| 758 | 139.04 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 15 |
| 826 | 139.07 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 10 | 4 |
| 835 | 139.09 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 10 | 4 |
| 880 | 139.14 | humidity | 90.0 | 10 | < th | dose independent | rect. | 17 | 22 |
| 923 | 139.18 | radiation | 1.0 | 90 | < th | dose independent | rect. | 19 | 23 |
| 976 | 139.21 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 13 | 1 |
| 981 | 139.21 | precipitation | 0.1 | 270 | > th | dose dependent | sin | 3 | NA |