Os07g0448200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Plasma membrane intrinsic protein (Aquaporin).
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Os07g0448200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Plasma membrane intrinsic protein (Aquaporin).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 544.35 | 1.1 | 7.04 | 0.637 | 6.7 | -2.59 | 5.2 | -1.54 | -0.885 | 9.61 | 83.83 | 70 | 18.3 | -- |
| 548.33 | 1.09 | 7.03 | 0.616 | 6.71 | -2.58 | 4.96 | -- | -0.891 | 9.61 | 83.65 | 65 | 18.4 | -- |
| 638.39 | 1.18 | 7.04 | 0.795 | 6.66 | -2.73 | -- | 0.0371 | -0.894 | 9.68 | 83.7 | 69 | 17.9 | -- |
| 638.26 | 1.18 | 7.04 | 0.783 | 6.62 | -2.77 | -- | -- | -0.899 | 9.69 | 83.78 | 69 | 17.8 | -- |
| 1200.49 | 1.61 | 8.09 | -0.786 | -- | -7.65 | -- | -4.81 | -1.76 | -- | 10.89 | 581 | 13.4 | -- |
| 660.88 | 1.21 | 7 | 0.598 | 6.26 | -- | 5 | -- | -0.678 | 9.95 | -- | -- | -- | -- |
| 757.99 | 1.29 | 7 | 0.792 | 6.24 | -- | -- | -- | -0.668 | 9.95 | -- | -- | -- | -- |
| 756.78 | 1.28 | 7.16 | 0.794 | -- | -6.33 | -- | -- | -0.668 | -- | -553.2 | 28 | 8.35 | -- |
| 654.39 | 1.19 | 7.05 | -- | 6.62 | -2.8 | -- | -- | -0.979 | 9.69 | 83.49 | 69 | 17.7 | -- |
| 3093 | 2.6 | 7.17 | 0.719 | -- | -- | -- | -- | -0.669 | -- | -- | -- | -- | -- |
| 774.51 | 1.3 | 7.02 | -- | 6.23 | -- | -- | -- | -0.756 | 9.94 | -- | -- | -- | -- |
| 772.93 | 1.29 | 7.19 | -- | -- | -6.33 | -- | -- | -0.766 | -- | -525.2 | 16 | 8.27 | -- |
| 3106.63 | 2.6 | 7.18 | -- | -- | -- | -- | -- | -0.749 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 545.13 | temperature | 20.0 | 270 | > th | dose independent | rect. | 14 | 17 |
| 7 | 550.63 | humidity | 80.0 | 30 | > th | dose dependent | sin | 1 | NA |
| 17 | 555.64 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 20 | 8 |
| 19 | 555.84 | humidity | 80.0 | 10 | < th | dose independent | rect. | 21 | 19 |
| 28 | 557.34 | temperature | 20.0 | 10 | > th | dose independent | rect. | 15 | 18 |
| 35 | 558.99 | humidity | 90.0 | 90 | < th | dose independent | rect. | 1 | 14 |
| 44 | 559.62 | humidity | 90.0 | 90 | < th | dose independent | sin | 1 | NA |
| 64 | 561.66 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 4 | 15 |
| 78 | 563.05 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 2 | 23 |
| 108 | 565.30 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 23 | 22 |
| 123 | 566.45 | radiation | 20.0 | 90 | < th | dose dependent | sin | 1 | NA |
| 133 | 567.16 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 9 | 23 |
| 138 | 567.32 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 3 | 20 |
| 141 | 567.55 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 21 | 23 |
| 145 | 567.67 | humidity | 80.0 | 90 | > th | dose dependent | no | NA | NA |
| 147 | 567.70 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 13 | 23 |
| 152 | 567.82 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 11 | 23 |
| 153 | 567.97 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 2 | 15 |
| 154 | 567.97 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 19 | 23 |
| 155 | 568.01 | humidity | 90.0 | 90 | > th | dose independent | sin | 0 | NA |
| 160 | 568.18 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 17 | 23 |
| 161 | 568.19 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 7 |
| 216 | 570.33 | radiation | 10.0 | 90 | > th | dose independent | rect. | 8 | 8 |
| 288 | 572.60 | humidity | 90.0 | 90 | > th | dose independent | rect. | 5 | 14 |
| 298 | 573.02 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 20 | 6 |
| 302 | 573.18 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 20 | 6 |
| 304 | 573.18 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 20 | 6 |
| 305 | 573.18 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 7 | 23 |
| 402 | 575.32 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 21 | 18 |
| 409 | 575.42 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 21 | 2 |
| 415 | 575.54 | radiation | 1.0 | 270 | < th | dose independent | rect. | 4 | 13 |
| 429 | 575.80 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 23 | 2 |
| 465 | 576.48 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 1 | 7 |
| 466 | 576.48 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 14 | 17 |
| 482 | 576.77 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 13 | 22 |
| 487 | 576.81 | radiation | 10.0 | 270 | < th | dose independent | rect. | 2 | 15 |
| 501 | 577.02 | radiation | 20.0 | 90 | < th | dose independent | rect. | 4 | 16 |
| 512 | 577.24 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 20 | 2 |
| 551 | 577.52 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 9 | 18 |
| 554 | 577.57 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 13 | 19 |
| 564 | 577.67 | humidity | 90.0 | 90 | > th | dose independent | rect. | 4 | 17 |
| 566 | 577.71 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 14 | 19 |
| 567 | 577.74 | radiation | 10.0 | 90 | > th | dose independent | sin | 1 | NA |
| 616 | 578.24 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 15 | 19 |
| 622 | 578.34 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 20 | 3 |
| 623 | 578.34 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 20 | 3 |
| 647 | 578.55 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 20 | 3 |
| 680 | 578.85 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 681 | 578.85 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 683 | 578.88 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 20 | 2 |
| 695 | 579.01 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 699 | 579.03 | radiation | 20.0 | 90 | < th | dose independent | rect. | 4 | 14 |
| 770 | 579.54 | humidity | 90.0 | 90 | < th | dose independent | rect. | 8 | 23 |
| 793 | 579.92 | humidity | 80.0 | 270 | > th | dose dependent | rect. | 23 | 9 |
| 866 | 580.74 | humidity | 90.0 | 90 | < th | dose independent | rect. | 5 | 10 |