Os07g0447800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Phosphoglucomutase/phosphomannomutase family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0447800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Phosphoglucomutase/phosphomannomutase family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 15.9 | 0.187 | 11.9 | -0.719 | 0.651 | 0.592 | -1.25 | 2.37 | -0.0554 | 13.6 | 10.06 | 31 | -- | -- |
| 18.57 | 0.202 | 11.9 | -1.05 | 0.647 | 0.515 | -0.689 | -- | -0.147 | 13.7 | 19.99 | 72 | -- | -- |
| 16.96 | 0.192 | 11.8 | -0.661 | 0.887 | 0.271 | -- | 1.76 | -0.0365 | 13.6 | 18.91 | 902 | -- | -- |
| 20.41 | 0.212 | 11.9 | -1.06 | 0.661 | 0.484 | -- | -- | -0.146 | 13.7 | 19.16 | 107 | -- | -- |
| 37.86 | 0.288 | 11.9 | -1.16 | -- | 1.11 | -- | 0.342 | -0.248 | -- | 18.91 | 902 | -- | -- |
| 22.52 | 0.222 | 11.9 | -0.942 | 0.835 | -- | -0.584 | -- | -0.0599 | 13.8 | -- | -- | -- | -- |
| 23.84 | 0.229 | 11.9 | -0.96 | 0.835 | -- | -- | -- | -0.0631 | 13.9 | -- | -- | -- | -- |
| 37.84 | 0.288 | 11.9 | -1.2 | -- | 1.08 | -- | -- | -0.254 | -- | 21.03 | 27 | -- | -- |
| 47.87 | 0.324 | 11.9 | -- | 0.806 | 0.126 | -- | -- | 0.026 | 13.9 | 21.8 | 59 | -- | -- |
| 66.07 | 0.38 | 11.9 | -0.994 | -- | -- | -- | -- | -0.0823 | -- | -- | -- | -- | -- |
| 48.14 | 0.325 | 11.9 | -- | 0.853 | -- | -- | -- | 0.0438 | 13.9 | -- | -- | -- | -- |
| 74.04 | 0.402 | 11.9 | -- | -- | 0.841 | -- | -- | -0.0526 | -- | 24 | 20 | -- | -- |
| 92.16 | 0.448 | 11.9 | -- | -- | -- | -- | -- | 0.0281 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 15.42 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 22 |
| 6 | 15.69 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 9 | 15.73 | temperature | 20 | 90 | > th | dose dependent | rect. | 19 | 23 |
| 12 | 15.81 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 17 | 15.90 | temperature | 10 | 30 | > th | dose dependent | no | NA | NA |
| 26 | 15.97 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 33 | 16.01 | temperature | 20 | 30 | > th | dose dependent | rect. | 21 | 23 |
| 35 | 16.02 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 38 | 16.03 | temperature | 20 | 30 | > th | dose dependent | rect. | 13 | 23 |
| 40 | 16.04 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 23 |
| 41 | 16.04 | temperature | 20 | 30 | > th | dose dependent | rect. | 11 | 23 |
| 44 | 16.06 | temperature | 30 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 49 | 16.08 | temperature | 30 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 52 | 16.09 | temperature | 30 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 53 | 16.10 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 55 | 16.10 | temperature | 20 | 90 | > th | dose dependent | rect. | 7 | 23 |
| 58 | 16.11 | temperature | 20 | 30 | > th | dose dependent | rect. | 5 | 23 |
| 74 | 16.15 | temperature | 20 | 30 | > th | dose dependent | rect. | 15 | 23 |
| 90 | 16.18 | temperature | 30 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 93 | 16.19 | temperature | 20 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 95 | 16.21 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 19 |
| 103 | 16.22 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 128 | 16.28 | temperature | 30 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 130 | 16.29 | temperature | 20 | 30 | > th | dose dependent | rect. | 1 | 23 |
| 172 | 16.36 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 19 |
| 176 | 16.36 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 177 | 16.36 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 215 | 16.43 | temperature | 20 | 720 | > th | dose dependent | sin | 6 | NA |
| 220 | 16.43 | temperature | 20 | 720 | > th | dose dependent | rect. | 13 | 21 |
| 283 | 16.51 | temperature | 20 | 1440 | > th | dose dependent | sin | 11 | NA |
| 299 | 16.52 | temperature | 10 | 720 | > th | dose dependent | rect. | 11 | 23 |
| 330 | 16.56 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 387 | 16.60 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 1 |
| 403 | 16.61 | temperature | 25 | 1440 | < th | dose dependent | rect. | 18 | 4 |
| 429 | 16.63 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 7 |
| 553 | 16.72 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 6 |
| 575 | 16.73 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 9 |
| 644 | 16.76 | temperature | 20 | 720 | > th | dose dependent | rect. | 9 | 23 |
| 887 | 16.89 | temperature | 30 | 1440 | < th | dose dependent | sin | 14 | NA |
| 935 | 16.91 | temperature | 25 | 720 | < th | dose independent | rect. | 1 | 21 |