Os07g0442000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os07g0442000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 80.5 | 0.422 | 9 | -0.822 | 1.46 | 0.924 | -0.879 | 0.847 | 0.253 | 15.9 | 24.21 | 62 | -- | -- |
| 81.49 | 0.42 | 8.98 | -0.687 | 1.54 | 0.844 | -1.08 | -- | 0.321 | 15.9 | 26.4 | 67 | -- | -- |
| 82.37 | 0.423 | 9.01 | -0.876 | 1.46 | 0.977 | -- | 1.33 | 0.236 | 16 | 24.2 | 77 | -- | -- |
| 84.73 | 0.429 | 8.98 | -0.711 | 1.54 | 0.859 | -- | -- | 0.32 | 16 | 26.41 | 66 | -- | -- |
| 187.54 | 0.638 | 8.99 | -0.82 | -- | 1.54 | -- | 0.436 | 0.157 | -- | 15.31 | 1139 | -- | -- |
| 91.45 | 0.448 | 9.02 | -0.906 | 1.35 | -- | -1.07 | -- | 0.136 | 16.1 | -- | -- | -- | -- |
| 94.5 | 0.455 | 9.02 | -0.918 | 1.35 | -- | -- | -- | 0.13 | 16.3 | -- | -- | -- | -- |
| 177.19 | 0.62 | 8.98 | -0.682 | -- | 0.954 | -- | -- | 0.263 | -- | 40.25 | 1185 | -- | -- |
| 96.76 | 0.458 | 8.95 | -- | 1.63 | 1.13 | -- | -- | 0.45 | 16 | 26.75 | 78 | -- | -- |
| 192.61 | 0.648 | 9.01 | -0.972 | -- | -- | -- | -- | 0.0944 | -- | -- | -- | -- | -- |
| 116.72 | 0.505 | 9 | -- | 1.37 | -- | -- | -- | 0.232 | 16.3 | -- | -- | -- | -- |
| 187.92 | 0.638 | 8.95 | -- | -- | 1.24 | -- | -- | 0.381 | -- | 100.3 | 1197 | -- | -- |
| 217.52 | 0.688 | 8.99 | -- | -- | -- | -- | -- | 0.202 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 65.92 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 5 | 20 |
| 12 | 68.02 | radiation | 20.0 | 10 | < th | dose independent | rect. | 5 | 20 |
| 34 | 69.69 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 5 | 20 |
| 37 | 69.88 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 16 | 5 |
| 46 | 70.53 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 5 | 20 |
| 49 | 70.74 | wind | 9.0 | 1440 | < th | dose independent | rect. | 2 | 3 |
| 50 | 70.74 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 2 | 3 |
| 53 | 70.74 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 2 | 3 |
| 57 | 70.74 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 2 | 3 |
| 66 | 70.74 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 2 | 3 |
| 67 | 70.74 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 2 | 3 |
| 79 | 70.74 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 21 |
| 83 | 70.78 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 20 | 9 |
| 86 | 70.86 | temperature | 15.0 | 10 | > th | dose independent | rect. | 20 | 9 |
| 87 | 70.87 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 20 | 9 |
| 90 | 70.99 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 19 | 9 |
| 91 | 71.04 | temperature | 25.0 | 30 | < th | dose independent | rect. | 24 | 5 |
| 100 | 71.26 | wind | 1.0 | 30 | > th | dose independent | rect. | 4 | 21 |
| 102 | 71.29 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 9 | 9 |
| 103 | 71.29 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 9 | 9 |
| 111 | 71.60 | radiation | 40.0 | 30 | < th | dose independent | rect. | 5 | 20 |
| 114 | 71.74 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 5 | 9 |
| 118 | 71.79 | temperature | 15.0 | 90 | > th | dose independent | rect. | 9 | 19 |
| 120 | 71.84 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 5 | 6 |
| 134 | 72.04 | radiation | 1.0 | 270 | < th | dose independent | rect. | 5 | 1 |
| 137 | 72.05 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 9 | 19 |
| 142 | 72.08 | temperature | 15.0 | 90 | > th | dose independent | rect. | 11 | 17 |
| 143 | 72.08 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 5 | 9 |
| 144 | 72.10 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 24 | 1 |
| 152 | 72.23 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 24 | 5 |
| 205 | 72.47 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 1 | 4 |
| 210 | 72.54 | temperature | 15.0 | 10 | > th | dose independent | rect. | 9 | 20 |
| 211 | 72.56 | humidity | 80.0 | 270 | > th | dose independent | rect. | 24 | 1 |
| 212 | 72.58 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 1 | 3 |
| 216 | 72.62 | radiation | 30.0 | 90 | < th | dose independent | rect. | 4 | 7 |
| 217 | 72.62 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 1 | 3 |
| 220 | 72.62 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 9 | 20 |
| 223 | 72.66 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 24 | 1 |
| 234 | 72.73 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 1 | 3 |
| 239 | 72.75 | humidity | 50.0 | 10 | > th | dose independent | rect. | 5 | 20 |
| 244 | 72.78 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 1 | 4 |
| 252 | 72.87 | humidity | 80.0 | 90 | > th | dose independent | rect. | 1 | 3 |
| 263 | 72.95 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 1 | 3 |
| 264 | 72.95 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 1 | 3 |
| 267 | 72.97 | wind | 1.0 | 90 | > th | dose independent | rect. | 4 | 5 |
| 270 | 72.98 | wind | 9.0 | 10 | < th | dose independent | rect. | 1 | 4 |
| 271 | 72.98 | temperature | 10.0 | 10 | > th | dose independent | rect. | 1 | 4 |
| 274 | 72.98 | humidity | 50.0 | 10 | > th | dose independent | rect. | 1 | 4 |
| 277 | 72.98 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 1 | 4 |
| 278 | 72.98 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 1 | 4 |
| 280 | 72.98 | radiation | 1.0 | 10 | < th | dose independent | rect. | 1 | 4 |
| 285 | 72.98 | temperature | 10.0 | 10 | > th | dose independent | rect. | 5 | 20 |
| 288 | 73.01 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 1 | 4 |
| 291 | 73.01 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 1 | 4 |
| 296 | 73.04 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 17 | 11 |
| 297 | 73.05 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 24 | 1 |
| 298 | 73.05 | temperature | 10.0 | 90 | > th | dose independent | rect. | 1 | 3 |
| 301 | 73.05 | humidity | 50.0 | 90 | > th | dose independent | rect. | 1 | 3 |
| 304 | 73.05 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 1 | 3 |
| 305 | 73.05 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 1 | 3 |
| 307 | 73.05 | radiation | 1.0 | 90 | < th | dose independent | rect. | 1 | 3 |
| 312 | 73.05 | temperature | 10.0 | 90 | > th | dose independent | rect. | 4 | 21 |
| 313 | 73.05 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 1 | 3 |
| 318 | 73.06 | temperature | 15.0 | 270 | > th | dose independent | rect. | 24 | 1 |
| 319 | 73.06 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 1 |
| 320 | 73.06 | wind | 9.0 | 90 | < th | dose independent | rect. | 1 | 3 |
| 322 | 73.06 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 1 |
| 323 | 73.09 | temperature | 15.0 | 270 | > th | dose independent | rect. | 23 | 3 |
| 327 | 73.10 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 11 | 17 |
| 331 | 73.12 | wind | 9.0 | 10 | < th | dose dependent | rect. | 1 | 4 |
| 332 | 73.13 | wind | 9.0 | 270 | < th | dose independent | rect. | 24 | 1 |
| 334 | 73.13 | temperature | 30.0 | 270 | < th | dose independent | rect. | 24 | 1 |
| 335 | 73.13 | humidity | 50.0 | 270 | > th | dose independent | rect. | 24 | 1 |
| 338 | 73.13 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 24 | 1 |
| 339 | 73.13 | radiation | 1.0 | 270 | < th | dose independent | rect. | 24 | 1 |
| 344 | 73.13 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 13 |
| 345 | 73.13 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 23 |
| 346 | 73.13 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 24 | 1 |
| 352 | 73.13 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 13 |
| 360 | 73.19 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 23 | 3 |
| 361 | 73.19 | temperature | 25.0 | 30 | < th | dose independent | rect. | 5 | 20 |
| 363 | 73.20 | radiation | 20.0 | 10 | < th | dose independent | rect. | 5 | 9 |
| 380 | 73.29 | wind | 9.0 | 90 | < th | dose independent | rect. | 4 | 21 |
| 381 | 73.30 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 4 | 7 |
| 400 | 73.32 | wind | 1.0 | 270 | > th | dose independent | rect. | 4 | 2 |
| 408 | 73.34 | temperature | 10.0 | 720 | > th | dose independent | rect. | 9 | 9 |
| 409 | 73.34 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 9 | 9 |
| 410 | 73.34 | temperature | 10.0 | 720 | > th | dose independent | rect. | 18 | 15 |
| 411 | 73.34 | temperature | 30.0 | 720 | < th | dose independent | rect. | 18 | 15 |
| 412 | 73.34 | humidity | 50.0 | 720 | > th | dose independent | rect. | 18 | 15 |
| 413 | 73.35 | wind | 9.0 | 720 | < th | dose independent | rect. | 18 | 15 |
| 415 | 73.36 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 1 | 4 |
| 416 | 73.37 | temperature | 15.0 | 270 | > th | dose independent | rect. | 17 | 11 |
| 417 | 73.37 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 5 | 20 |
| 420 | 73.37 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 5 | 7 |
| 422 | 73.37 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 5 | 20 |
| 425 | 73.39 | wind | 1.0 | 90 | > th | dose independent | rect. | 4 | 15 |
| 456 | 73.44 | radiation | 20.0 | 10 | < th | dose independent | rect. | 5 | 5 |
| 489 | 73.63 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 18 | 15 |
| 501 | 73.68 | wind | 9.0 | 270 | < th | dose dependent | rect. | 24 | 1 |
| 508 | 73.73 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 20 | 9 |
| 534 | 73.77 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 4 | 21 |
| 535 | 73.77 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 4 | 21 |
| 552 | 73.83 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 5 | 20 |
| 593 | 73.95 | temperature | 15.0 | 270 | > th | dose independent | rect. | 7 | 21 |
| 603 | 73.98 | radiation | 40.0 | 720 | < th | dose independent | rect. | 18 | 15 |
| 636 | 74.05 | temperature | 10.0 | 720 | > th | dose independent | rect. | 21 | 9 |
| 637 | 74.05 | temperature | 30.0 | 720 | < th | dose independent | rect. | 21 | 9 |
| 638 | 74.05 | humidity | 50.0 | 720 | > th | dose independent | rect. | 21 | 9 |
| 641 | 74.05 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 21 | 9 |
| 642 | 74.05 | radiation | 20.0 | 720 | < th | dose independent | rect. | 21 | 9 |
| 645 | 74.05 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 24 | 13 |
| 646 | 74.05 | temperature | 10.0 | 720 | > th | dose independent | rect. | 6 | 15 |
| 647 | 74.05 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 21 |
| 649 | 74.06 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 11 |
| 650 | 74.06 | temperature | 10.0 | 270 | > th | dose independent | rect. | 24 | 13 |
| 651 | 74.06 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 24 | 13 |
| 660 | 74.10 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 4 | 20 |
| 662 | 74.11 | wind | 9.0 | 720 | < th | dose independent | rect. | 21 | 9 |
| 665 | 74.11 | wind | 1.0 | 270 | > th | dose independent | rect. | 2 | 22 |
| 669 | 74.13 | radiation | 40.0 | 720 | < th | dose dependent | rect. | 21 | 9 |
| 670 | 74.13 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 12 | 13 |
| 690 | 74.21 | wind | 9.0 | 270 | < th | dose independent | rect. | 24 | 13 |
| 696 | 74.25 | wind | 1.0 | 90 | > th | dose independent | rect. | 1 | 3 |
| 697 | 74.25 | temperature | 15.0 | 90 | > th | dose independent | rect. | 15 | 13 |
| 707 | 74.28 | temperature | 15.0 | 720 | > th | dose independent | rect. | 16 | 5 |
| 723 | 74.34 | wind | 9.0 | 270 | < th | dose independent | rect. | 13 | 11 |
| 728 | 74.35 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 5 | 1 |
| 748 | 74.41 | wind | 9.0 | 270 | < th | dose independent | rect. | 2 | 22 |
| 751 | 74.42 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 23 |
| 752 | 74.42 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 23 |
| 763 | 74.46 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 24 | 4 |
| 771 | 74.51 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 9 | 19 |
| 776 | 74.54 | temperature | 25.0 | 270 | < th | dose independent | rect. | 5 | 1 |
| 777 | 74.54 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 6 | 15 |
| 782 | 74.54 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 6 | 15 |
| 784 | 74.55 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 5 | 4 |
| 786 | 74.57 | radiation | 20.0 | 90 | < th | dose independent | rect. | 13 | 12 |
| 800 | 74.63 | wind | 9.0 | 10 | < th | dose dependent | rect. | 20 | 9 |
| 803 | 74.65 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 11 | 17 |
| 806 | 74.66 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 5 | 1 |
| 811 | 74.67 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 9 | 20 |
| 817 | 74.70 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 5 | 5 |
| 825 | 74.73 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 5 | 20 |
| 828 | 74.74 | temperature | 15.0 | 10 | > th | dose independent | rect. | 16 | 13 |
| 836 | 74.76 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 4 | 5 |
| 837 | 74.76 | radiation | 40.0 | 720 | < th | dose independent | rect. | 3 | 6 |
| 838 | 74.76 | humidity | 70.0 | 10 | > th | dose independent | rect. | 5 | 20 |
| 843 | 74.78 | wind | 9.0 | 10 | < th | dose dependent | rect. | 15 | 14 |
| 845 | 74.79 | humidity | 60.0 | 90 | > th | dose independent | rect. | 4 | 7 |
| 846 | 74.79 | radiation | 40.0 | 90 | < th | dose independent | rect. | 13 | 12 |
| 857 | 74.82 | wind | 1.0 | 270 | > th | dose independent | rect. | 13 | 11 |
| 907 | 74.90 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 11 |
| 908 | 74.90 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 5 | 5 |
| 909 | 74.90 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 11 |
| 916 | 74.92 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 5 |
| 919 | 74.92 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 5 |
| 920 | 74.92 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 5 |
| 922 | 74.92 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 19 |
| 927 | 74.93 | humidity | 50.0 | 10 | > th | dose independent | rect. | 5 | 15 |
| 930 | 74.94 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 3 | 2 |
| 942 | 74.99 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 5 | 1 |
| 955 | 75.02 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 4 | 20 |
| 959 | 75.04 | wind | 1.0 | 90 | > th | dose independent | rect. | 4 | 7 |
| 995 | 75.12 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 15 | 13 |