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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os07g0440100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.79 (0.0798) R2 : 0.236
β1 : -1.95 (0.291) R2dD : 0.0805 R2D : 0.0867
β2 : 1.18 (0.207) R2dC : 0.0553 R2C : 0.0603
β3 : 1.63 (0.814) R2dE : 0.00957 R2E : 0.0456
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -14.1 (3.14) R2dD*E : 0.0462 R2D*E : 0.0811
γ1 : -0.293 (0.169) R2dN8 : 0.00722 R2N8 : -0.00111
σ : 1.47
deviance : 996.89
__
_____
C
peak time of C : 5.53
E
wheather : wind
threshold : 2.234
memory length : 246
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 4.04
open length of G : 5.03

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
996.86 1.48 3.79 -1.96 1.19 1.68 -0.424 -13.8 -0.298 5.58 2.468 247 4.05 5.05
1030.86 1.5 3.79 -1.88 1.22 2.38 -1.24 -- -0.199 6.12 4.199 261 4.27 5.18
996.89 1.47 3.79 -1.95 1.18 1.63 -- -14.1 -0.293 5.53 2.234 246 4.04 5.03
1020.9 1.49 3.82 -1.88 1.2 4.32 -- -- -0.231 5.65 4.489 207 4.03 5.43
1057.69 1.51 3.82 -1.94 -- 2.5 -- -13.1 -0.331 -- 1.287 246 3.9 5.06
1079.11 1.54 3.86 -2.16 1.31 -- -1.94 -- -0.435 6.83 -- -- -- --
1087.69 1.54 3.86 -2.2 1.32 -- -- -- -0.432 6.45 -- -- -- --
1095.44 1.54 3.84 -1.8 -- 4.47 -- -- -0.235 -- 4.3 205 3.92 5.51
1112.41 1.55 3.8 -- 1.13 4.83 -- -- -0.0784 5.57 4.4 210 3.98 5.47
1178.35 1.6 3.89 -2.17 -- -- -- -- -0.405 -- -- -- -- --
1215.25 1.63 3.8 -- 1.29 -- -- -- -0.187 6.55 -- -- -- --
1181.52 1.6 3.81 -- -- 4.9 -- -- -0.0229 -- 4.431 210 3.78 5.65
1302.15 1.68 3.83 -- -- -- -- -- -0.164 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 1002.68 wind 3.0 270 > th dose dependent rect. 4 5
4 1006.67 wind 3.0 270 > th dose independent rect. 4 5
19 1011.06 temperature 15.0 720 > th dose independent rect. 17 16
20 1012.30 temperature 25.0 720 > th dose dependent rect. 21 1
25 1013.59 temperature 20.0 1440 < th dose independent rect. 9 3
34 1015.32 temperature 15.0 90 > th dose independent rect. 9 22
37 1015.50 atmosphere 1015.0 1440 > th dose independent rect. 3 8
38 1015.53 humidity 50.0 43200 > th dose independent rect. 5 1
41 1016.42 atmosphere 1015.0 1440 < th dose independent rect. 3 3
44 1017.11 temperature 20.0 1440 < th dose independent rect. 10 1
48 1017.11 temperature 15.0 4320 < th dose dependent rect. 10 1
51 1017.13 atmosphere 1015.0 1440 < th dose independent rect. 3 9
56 1017.42 humidity 50.0 43200 > th dose independent rect. 3 3
57 1017.80 precipitation 0.1 720 < th dose independent sin 1 NA
58 1017.80 precipitation 0.1 720 < th dose dependent sin 1 NA
59 1017.85 wind 3.0 270 > th dose dependent rect. 7 1
60 1017.88 humidity 70.0 4320 < th dose independent rect. 19 1
62 1018.14 humidity 50.0 1440 < th dose independent rect. 16 1
70 1018.54 humidity 50.0 1440 < th dose dependent rect. 16 1
74 1018.57 temperature 30.0 4320 > th dose dependent rect. 18 1
91 1018.69 temperature 15.0 720 > th dose independent rect. 6 23
92 1018.76 temperature 15.0 720 > th dose independent rect. 21 8
94 1018.87 humidity 50.0 43200 > th dose independent rect. 1 5
97 1019.00 temperature 15.0 720 > th dose independent rect. 9 8
102 1019.29 wind 3.0 270 > th dose independent rect. 7 1
103 1019.33 atmosphere 1010.0 30 < th dose independent rect. 9 22
105 1019.43 atmosphere 1015.0 1440 > th dose dependent rect. 2 10
106 1019.49 temperature 15.0 720 > th dose independent rect. 19 16
107 1019.74 temperature 15.0 720 > th dose independent rect. 18 23
113 1020.34 atmosphere 1010.0 90 < th dose independent rect. 9 18
116 1020.47 temperature 30.0 720 > th dose dependent rect. 18 1
138 1021.36 temperature 15.0 1440 > th dose independent rect. 6 10
139 1021.39 temperature 15.0 4320 > th dose independent rect. 9 1
140 1021.41 temperature 15.0 1440 > th dose independent rect. 16 14
146 1021.64 temperature 15.0 1440 > th dose independent rect. 18 12
148 1021.73 precipitation 0.1 720 > th dose independent rect. 3 14
162 1022.06 humidity 50.0 43200 > th dose independent rect. 22 8
176 1022.43 precipitation 0.1 720 > th dose dependent rect. 3 14
181 1022.58 wind 5.0 270 < th dose independent rect. 22 13
191 1022.91 radiation 1.0 720 > th dose dependent rect. 18 1
201 1022.92 temperature 15.0 1440 > th dose independent rect. 6 8
213 1023.27 humidity 50.0 14400 < th dose independent rect. 8 1
231 1023.27 humidity 50.0 14400 < th dose dependent rect. 8 1
248 1023.28 wind 1.0 10 < th dose dependent rect. 4 6
253 1023.45 wind 1.0 10 < th dose independent rect. 4 6
256 1023.49 humidity 50.0 1440 > th dose independent rect. 16 1
271 1024.00 humidity 70.0 4320 > th dose independent rect. 19 1
283 1024.23 precipitation 0.1 720 > th dose independent rect. 23 18
291 1024.37 wind 7.0 1440 > th dose independent rect. 3 5
295 1024.52 temperature 15.0 720 > th dose independent rect. 7 16
310 1024.75 atmosphere 1015.0 1440 < th dose independent rect. 1 5
319 1024.96 temperature 15.0 720 > th dose independent rect. 4 16
334 1024.99 atmosphere 1010.0 90 < th dose independent rect. 23 14
335 1025.01 precipitation 0.1 720 > th dose dependent rect. 23 18
336 1025.02 precipitation 0.1 1440 > th dose independent rect. 10 1
338 1025.02 precipitation 0.1 1440 > th dose dependent rect. 10 1
358 1025.50 precipitation 0.1 720 > th dose independent sin 2 NA
362 1025.54 precipitation 0.1 1440 < th dose independent rect. 24 7
363 1025.54 precipitation 0.1 1440 < th dose dependent rect. 24 7
380 1025.81 precipitation 0.1 1440 < th dose independent rect. 2 5
381 1025.81 precipitation 0.1 1440 < th dose dependent rect. 2 5
386 1025.87 precipitation 0.1 1440 < th dose independent rect. 2 1
387 1025.87 precipitation 0.1 1440 < th dose dependent rect. 2 1
394 1025.90 temperature 15.0 720 > th dose independent rect. 23 22
404 1026.11 radiation 20.0 4320 < th dose independent rect. 3 3
408 1026.16 temperature 15.0 1440 > th dose independent rect. 3 3
431 1026.48 atmosphere 1010.0 90 < th dose independent rect. 9 11
467 1027.00 temperature 15.0 270 > th dose independent rect. 9 17
478 1027.31 temperature 15.0 720 > th dose independent sin 0 NA
482 1027.34 temperature 15.0 270 > th dose independent rect. 9 15
483 1027.34 wind 7.0 1440 > th dose dependent rect. 7 1
490 1027.43 temperature 15.0 1440 > th dose independent rect. 6 2
491 1027.43 precipitation 0.1 720 > th dose dependent sin 2 NA
498 1027.51 temperature 15.0 720 > th dose independent rect. 1 19
500 1027.55 humidity 90.0 720 < th dose independent rect. 8 8
511 1027.69 precipitation 0.1 270 > th dose independent rect. 3 8
520 1027.74 precipitation 0.1 1440 < th dose independent rect. 24 5
521 1027.74 precipitation 0.1 1440 < th dose dependent rect. 24 5
529 1027.82 precipitation 0.1 270 > th dose independent rect. 5 3
531 1027.82 precipitation 0.1 270 > th dose dependent rect. 5 3
535 1027.84 precipitation 0.1 270 > th dose dependent rect. 3 8
538 1027.85 wind 5.0 10 > th dose independent rect. 5 7
541 1027.88 precipitation 0.1 1440 > th dose independent rect. 5 1
555 1027.95 precipitation 0.1 1440 < th dose independent rect. 4 3
556 1027.95 temperature 20.0 720 < th dose independent rect. 9 9
557 1027.95 precipitation 0.1 1440 < th dose dependent rect. 4 3
560 1027.97 precipitation 0.1 1440 > th dose dependent rect. 5 1
585 1028.14 wind 1.0 10 > th dose dependent rect. 5 7
591 1028.19 precipitation 0.1 1440 < th dose independent rect. 2 3
592 1028.19 precipitation 0.1 1440 < th dose dependent rect. 2 3
597 1028.24 precipitation 0.1 1440 > th dose dependent rect. 4 3
602 1028.31 precipitation 0.1 1440 > th dose independent rect. 4 3
618 1028.39 temperature 15.0 90 > th dose independent rect. 5 23
621 1028.42 precipitation 0.1 1440 > th dose independent rect. 2 8
623 1028.43 wind 1.0 10 < th dose independent rect. 4 2
624 1028.44 precipitation 0.1 1440 > th dose independent rect. 2 5
628 1028.46 humidity 70.0 720 < th dose independent rect. 18 14
629 1028.49 humidity 70.0 720 < th dose independent rect. 18 2
641 1028.49 precipitation 0.1 1440 > th dose dependent rect. 2 8
645 1028.51 temperature 25.0 720 > th dose independent rect. 21 2
647 1028.51 temperature 15.0 720 > th dose independent rect. 14 23
682 1028.57 precipitation 0.1 1440 > th dose dependent rect. 2 5
689 1028.59 precipitation 0.1 1440 < th dose independent rect. 24 14
691 1028.59 precipitation 0.1 1440 < th dose dependent rect. 24 14
695 1028.67 precipitation 0.1 1440 < th dose independent rect. 2 12
696 1028.67 precipitation 0.1 1440 < th dose dependent rect. 2 12
705 1028.82 temperature 20.0 720 < th dose dependent rect. 9 10
716 1028.92 precipitation 0.1 1440 > th dose dependent rect. 4 6
717 1028.93 temperature 15.0 90 > th dose independent sin 17 NA
719 1028.94 temperature 15.0 90 > th dose independent sin 5 NA
722 1028.96 temperature 15.0 90 > th dose independent sin 19 NA
725 1028.98 temperature 15.0 270 > th dose independent sin 7 NA
730 1029.00 temperature 15.0 1440 > th dose independent rect. 1 5
734 1029.02 precipitation 0.1 1440 > th dose independent rect. 4 6
737 1029.06 wind 1.0 90 < th dose dependent rect. 4 1
756 1029.22 precipitation 0.1 1440 > th dose independent rect. 23 11
763 1029.25 temperature 15.0 1440 > th dose independent sin 12 NA
764 1029.25 precipitation 0.1 1440 < th dose independent rect. 2 10
766 1029.25 precipitation 0.1 1440 < th dose dependent rect. 2 10
767 1029.26 precipitation 0.1 1440 > th dose independent rect. 24 7
772 1029.31 wind 1.0 90 < th dose independent rect. 4 1
777 1029.34 precipitation 0.1 1440 > th dose dependent rect. 23 11
788 1029.42 temperature 15.0 1440 > th dose independent rect. 11 1
791 1029.44 precipitation 0.1 1440 > th dose dependent rect. 24 7
801 1029.51 temperature 20.0 1440 < th dose dependent rect. 9 7
805 1029.55 temperature 25.0 720 > th dose independent rect. 17 6
809 1029.59 humidity 70.0 4320 > th dose independent rect. 19 8
814 1029.62 humidity 70.0 4320 > th dose independent rect. 19 6
830 1029.70 wind 1.0 10 < th dose dependent rect. 4 3
859 1029.83 temperature 15.0 4320 < th dose independent rect. 13 1
880 1029.96 temperature 15.0 720 > th dose independent rect. 12 23
918 1030.18 radiation 20.0 4320 < th dose independent rect. 1 5
919 1030.18 wind 3.0 720 > th dose independent rect. 4 10
936 1030.28 temperature 15.0 720 > th dose independent rect. 1 21
998 1030.63 wind 3.0 270 > th dose independent rect. 4 17