Os07g0438300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0438300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 35.5 | 0.28 | 8.53 | 1.52 | 0.226 | -0.0423 | -0.0352 | 2.72 | 0.809 | 1.69 | 0.3773 | 4600 | -- | -- |
| 35.81 | 0.279 | 8.6 | 1.36 | 0.227 | 0.626 | -0.108 | -- | 0.814 | 0.742 | 0.5 | 20440 | -- | -- |
| 35.51 | 0.278 | 8.53 | 1.52 | 0.226 | -0.0437 | -- | 2.73 | 0.809 | 1.69 | 0.3795 | 4599 | -- | -- |
| 34.87 | 0.275 | 8.58 | 1.26 | 0.251 | 0.676 | -- | -- | 0.843 | 1.74 | 0.8305 | 20522 | -- | -- |
| 38.6 | 0.289 | 8.52 | 1.53 | -- | -0.0798 | -- | 2.89 | 0.816 | -- | 0.389 | 4697 | -- | -- |
| 45.16 | 0.315 | 8.59 | 1.6 | 0.244 | -- | 0.0566 | -- | 0.781 | 1.64 | -- | -- | -- | -- |
| 45.17 | 0.315 | 8.59 | 1.6 | 0.244 | -- | -- | -- | 0.781 | 1.63 | -- | -- | -- | -- |
| 38.71 | 0.29 | 8.57 | 1.26 | -- | 0.652 | -- | -- | 0.848 | -- | 0.9102 | 20956 | -- | -- |
| 57.43 | 0.353 | 8.57 | -- | 0.286 | 0.967 | -- | -- | 0.844 | 1.89 | 1.412 | 47520 | -- | -- |
| 48.81 | 0.326 | 8.59 | 1.61 | -- | -- | -- | -- | 0.786 | -- | -- | -- | -- | -- |
| 112.38 | 0.496 | 8.63 | -- | 0.273 | -- | -- | -- | 0.603 | 1.81 | -- | -- | -- | -- |
| 61.35 | 0.365 | 8.57 | -- | -- | 1.05 | -- | -- | 0.828 | -- | 1.053 | 37859 | -- | -- |
| 116.91 | 0.505 | 8.63 | -- | -- | -- | -- | -- | 0.608 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 34.87 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 16 | 6 |
| 6 | 35.00 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 16 | 9 |
| 7 | 35.00 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 11 | 11 |
| 19 | 35.08 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 19 | NA |
| 31 | 35.11 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 43 | 35.15 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 2 |
| 45 | 35.15 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 2 |
| 58 | 35.19 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 11 | 8 |
| 66 | 35.22 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 16 | 6 |
| 67 | 35.23 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 16 | 6 |
| 69 | 35.23 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 16 | 6 |
| 131 | 35.45 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 11 | 11 |
| 133 | 35.45 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 11 | 11 |
| 136 | 35.46 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 11 | 11 |
| 146 | 35.50 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 11 | 8 |
| 152 | 35.50 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 11 | 8 |
| 160 | 35.52 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 11 | 8 |
| 236 | 35.68 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 248 | 35.71 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 19 | NA |
| 250 | 35.71 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 19 | NA |
| 255 | 35.71 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 19 | NA |
| 275 | 35.76 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 1 | NA |
| 435 | 36.02 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 23 |
| 485 | 36.10 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 16 | 21 |
| 516 | 36.14 | precipitation | 0.1 | 14400 | > th | dose dependent | no | NA | NA |
| 560 | 36.21 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 15 |
| 564 | 36.21 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 15 |
| 567 | 36.22 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 15 |