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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os07g0437000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Flavin monoxygenase-like protein floozy.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 5.05 (0.0651) R2 : 0.59
β1 : 1.99 (0.241) R2dD : 0.0666 R2D : 0.0611
β2 : -- (--) R2dC : -- R2C : --
β3 : 5.64 (0.278) R2dE : 0.394 R2E : 0.515
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 1.3 (0.144) R2dN8 : 0.0371 R2N8 : 0.0823
σ : 1.21
deviance : 670.03
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_____
C
peak time of C : --
E
wheather : temperature
threshold : 1.341
memory length : 1642
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 3.65
open length of G : 5.78

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
655.02 1.2 5.02 2.01 4.83 6.43 2.99 2.04 0.962 5.39 9.282 275 2.71 19.6
657.1 1.19 5.04 1.95 4.73 6.34 2.27 -- 0.955 5.47 8.866 267 2.68 19.9
666.83 1.2 5.03 1.83 4.6 6.14 -- 0.363 0.872 5.47 9.042 273 2.45 20
665.25 1.2 5.06 1.84 4.58 6.15 -- -- 0.891 5.46 8.677 270 2.5 20
1065.04 1.52 5.13 2.07 -- 3.53 -- 1.71 1.06 -- 15.43 1546 3.27 19.7
1023.48 1.5 4.93 2.77 2.18 -- 0.607 -- 1.58 8.7 -- -- -- --
1024.7 1.5 4.93 2.79 2.18 -- -- -- 1.58 8.69 -- -- -- --
670.03 1.21 5.05 1.99 -- 5.64 -- -- 1.3 -- 1.341 1642 3.65 5.78
746.9 1.27 5.12 -- 4.94 6.81 -- -- 0.578 5.37 10.01 275 2.43 20.1
1294.1 1.68 4.98 2.79 -- -- -- -- 1.6 -- -- -- -- --
1229.76 1.64 5 -- 2.19 -- -- -- 1.27 8.6 -- -- -- --
714.67 1.25 5.25 -- -- 6.5 -- -- 0.395 -- 6.868 1658 3.53 5.9
1500.04 1.81 5.05 -- -- -- -- -- 1.29 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 660.83 temperature 10 270 > th dose dependent rect. 3 19
26 717.11 temperature 25 10 > th dose independent rect. 5 15
34 726.74 temperature 15 10 > th dose dependent rect. 6 16
41 731.46 temperature 10 10 > th dose dependent rect. 6 14
46 733.54 temperature 30 10 < th dose dependent rect. 10 20
55 736.30 temperature 20 270 > th dose dependent rect. 3 5
57 737.21 temperature 30 270 < th dose independent rect. 9 18
74 742.89 radiation 1 270 > th dose independent rect. 17 14
76 743.30 temperature 20 270 > th dose dependent rect. 4 3
77 744.14 temperature 30 270 < th dose independent rect. 7 21
91 748.16 temperature 25 10 > th dose dependent sin 10 NA
105 750.11 temperature 25 10 > th dose independent rect. 5 4
117 751.26 temperature 10 720 > th dose dependent rect. 19 21
128 752.71 temperature 20 720 > th dose dependent rect. 19 20
129 752.84 temperature 10 720 > th dose dependent rect. 21 19
135 754.38 temperature 20 720 > th dose dependent rect. 21 19
144 755.02 temperature 20 10 > th dose dependent rect. 17 16
147 755.37 temperature 25 4320 < th dose independent rect. 2 11
155 756.08 temperature 15 10 > th dose dependent rect. 4 22
169 757.34 temperature 30 720 < th dose independent rect. 16 20
175 757.93 temperature 10 270 > th dose dependent rect. 15 17
176 757.95 temperature 25 4320 > th dose independent rect. 2 11
199 759.86 temperature 20 270 > th dose dependent rect. 15 18
202 760.03 temperature 25 4320 > th dose dependent rect. 3 5
213 760.73 radiation 1 90 > th dose independent rect. 17 16
229 761.59 temperature 20 1440 > th dose dependent rect. 6 1
254 762.92 temperature 30 270 < th dose dependent rect. 7 21
260 763.29 radiation 1 90 > th dose independent sin 11 NA
265 763.62 temperature 25 10 > th dose independent rect. 17 16
280 764.14 radiation 1 90 < th dose independent sin 11 NA
281 764.18 temperature 20 270 > th dose dependent rect. 13 21
299 765.03 temperature 25 4320 < th dose independent sin 4 NA
323 766.23 temperature 25 4320 > th dose independent sin 4 NA
343 767.35 temperature 25 4320 < th dose independent rect. 2 16
361 768.30 radiation 1 270 < th dose dependent rect. 5 23
362 768.33 temperature 25 1440 > th dose dependent rect. 16 1
396 769.82 temperature 25 1440 > th dose dependent rect. 12 7
475 772.08 temperature 25 4320 < th dose independent rect. 3 5
512 773.04 humidity 90 43200 > th dose dependent rect. 4 1
525 773.41 temperature 20 720 > th dose dependent sin 7 NA
550 774.06 temperature 25 1440 > th dose dependent rect. 12 19
571 774.64 temperature 25 1440 > th dose dependent rect. 12 1
640 775.83 temperature 20 720 > th dose dependent rect. 19 15
642 775.87 radiation 1 90 < th dose dependent sin 10 NA
688 776.65 humidity 90 43200 > th dose dependent rect. 3 3
690 776.65 humidity 90 43200 > th dose dependent rect. 14 16
718 777.09 temperature 30 270 < th dose independent rect. 16 11
722 777.13 humidity 90 43200 > th dose dependent rect. 22 3
781 777.95 humidity 90 43200 > th dose dependent rect. 21 9
799 778.19 humidity 90 43200 > th dose dependent sin 14 NA
806 778.27 temperature 25 1440 > th dose independent rect. 16 7
852 778.83 temperature 25 1440 < th dose independent rect. 16 7
958 779.97 humidity 90 43200 > th dose independent rect. 21 10
976 780.13 temperature 25 1440 > th dose dependent sin 17 NA
993 780.30 humidity 90 43200 > th dose independent rect. 15 15
999 780.38 humidity 90 43200 > th dose independent rect. 17 13
1000 780.40 humidity 90 43200 > th dose independent rect. 12 18