Os07g0436700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0436700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 50.17 | 0.333 | 7.59 | 0.682 | 0.321 | 1.3 | 0.224 | 2.97 | 0.4 | 20.9 | 21 | 6467 | -- | -- |
| 57.26 | 0.352 | 7.72 | 0.438 | 0.34 | 0.884 | 0.761 | -- | 0.309 | 20.4 | 24.78 | 3149 | -- | -- |
| 50.32 | 0.33 | 7.59 | 0.672 | 0.32 | 1.31 | -- | 3 | 0.399 | 20.8 | 21.02 | 6571 | -- | -- |
| 57.04 | 0.352 | 7.73 | 0.42 | 0.356 | 0.865 | -- | -- | 0.283 | 20.2 | 24.6 | 2899 | -- | -- |
| 56.12 | 0.349 | 7.58 | 0.666 | -- | 1.33 | -- | 3.04 | 0.396 | -- | 21.07 | 6586 | -- | -- |
| 74.27 | 0.404 | 7.67 | 0.711 | 0.349 | -- | 0.338 | -- | 0.541 | 21.2 | -- | -- | -- | -- |
| 74.67 | 0.405 | 7.67 | 0.699 | 0.348 | -- | -- | -- | 0.54 | 21.2 | -- | -- | -- | -- |
| 59.14 | 0.358 | 7.71 | 0.416 | -- | 0.864 | -- | -- | 0.296 | -- | 24.8 | 2138 | -- | -- |
| 60 | 0.361 | 7.74 | -- | 0.372 | 0.871 | -- | -- | 0.219 | 20.1 | 24.1 | 2849 | -- | -- |
| 81.68 | 0.422 | 7.66 | 0.7 | -- | -- | -- | -- | 0.539 | -- | -- | -- | -- | -- |
| 87.54 | 0.438 | 7.68 | -- | 0.348 | -- | -- | -- | 0.463 | 21.3 | -- | -- | -- | -- |
| 62.78 | 0.369 | 7.74 | -- | -- | 0.952 | -- | -- | 0.213 | -- | 24.7 | 2138 | -- | -- |
| 94.59 | 0.454 | 7.67 | -- | -- | -- | -- | -- | 0.461 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 48.98 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 2 |
| 2 | 49.02 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 4 |
| 25 | 49.38 | temperature | 15 | 4320 | > th | dose dependent | rect. | 21 | 6 |
| 74 | 49.65 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 8 |
| 75 | 49.66 | temperature | 25 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 120 | 49.81 | temperature | 15 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 148 | 49.91 | temperature | 25 | 4320 | < th | dose dependent | sin | 13 | NA |
| 196 | 50.00 | temperature | 20 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 250 | 50.16 | temperature | 20 | 1440 | > th | dose dependent | sin | 10 | NA |
| 740 | 51.16 | temperature | 25 | 4320 | < th | dose dependent | no | NA | NA |
| 919 | 51.34 | temperature | 25 | 4320 | < th | dose dependent | rect. | 23 | 23 |