Os07g0432800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Myb, DNA-binding domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0432800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Myb, DNA-binding domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 83.66 | 0.43 | 7.59 | -0.986 | 0.527 | -1.52 | 1.18 | 1.21 | 0.886 | 1.55 | 19.06 | 10438 | -- | -- |
| 83.96 | 0.427 | 7.59 | -0.815 | 0.516 | -1.89 | 1.28 | -- | 0.978 | 1.72 | 14.88 | 16268 | -- | -- |
| 89.18 | 0.44 | 7.59 | -1.02 | 0.534 | -1.51 | -- | 1.2 | 0.874 | 1.49 | 18.92 | 10443 | -- | -- |
| 87.61 | 0.436 | 7.61 | -0.61 | 0.54 | -2.02 | -- | -- | 0.936 | 1.32 | 12.4 | 22584 | -- | -- |
| 104.55 | 0.476 | 7.53 | -0.691 | -- | -1.66 | -- | 1.26 | 1.05 | -- | 15.66 | 16188 | -- | -- |
| 143.81 | 0.562 | 7.78 | -2.28 | 0.468 | -- | 1.11 | -- | 0.19 | 1.6 | -- | -- | -- | -- |
| 148.74 | 0.571 | 7.78 | -2.31 | 0.468 | -- | -- | -- | 0.183 | 1.54 | -- | -- | -- | -- |
| 103.65 | 0.474 | 7.61 | -0.643 | -- | -2 | -- | -- | 0.937 | -- | 12.1 | 21893 | -- | -- |
| 91.91 | 0.447 | 7.58 | -- | 0.547 | -2.29 | -- | -- | 1.08 | 1.44 | 10.86 | 25403 | -- | -- |
| 162.13 | 0.595 | 7.78 | -2.29 | -- | -- | -- | -- | 0.194 | -- | -- | -- | -- | -- |
| 289.6 | 0.796 | 7.72 | -- | 0.427 | -- | -- | -- | 0.441 | 1.36 | -- | -- | -- | -- |
| 108.97 | 0.486 | 7.58 | -- | -- | -2.27 | -- | -- | 1.08 | -- | 8.6 | 26180 | -- | -- |
| 300.83 | 0.81 | 7.72 | -- | -- | -- | -- | -- | 0.448 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 82.09 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 5 |
| 2 | 82.09 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 7 |
| 3 | 82.18 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 4 | 5 |
| 4 | 82.21 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 4 | 5 |
| 5 | 82.21 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 4 | 5 |
| 6 | 82.24 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 4 | 7 |
| 7 | 82.24 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 4 | 7 |
| 8 | 82.26 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 4 | 7 |
| 12 | 82.38 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 24 | 17 |
| 14 | 82.42 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 24 | 17 |
| 19 | 82.57 | wind | 3.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 46 | 82.83 | wind | 3.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 48 | 82.85 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 3 | 9 |
| 53 | 82.89 | temperature | 20.0 | 14400 | > th | dose independent | sin | 4 | NA |
| 77 | 82.98 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 3 | 9 |
| 99 | 83.04 | temperature | 20.0 | 14400 | < th | dose independent | sin | 4 | NA |
| 101 | 83.04 | temperature | 15.0 | 14400 | > th | dose dependent | rect. | 5 | 3 |
| 117 | 83.07 | temperature | 15.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 118 | 83.07 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 1 | 10 |
| 134 | 83.12 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 141 | 83.12 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 171 | 83.18 | temperature | 15.0 | 14400 | > th | dose dependent | rect. | 22 | 15 |
| 181 | 83.20 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 185 | 83.22 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 1 | 10 |
| 189 | 83.22 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 10 | 3 |
| 190 | 83.22 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 1 | 10 |
| 191 | 83.22 | temperature | 15.0 | 14400 | > th | dose dependent | rect. | 24 | 13 |
| 199 | 83.23 | temperature | 15.0 | 14400 | > th | dose dependent | rect. | 22 | 1 |
| 205 | 83.24 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 11 | 19 |
| 210 | 83.25 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 1 | 10 |
| 213 | 83.25 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 216 | 83.25 | temperature | 15.0 | 14400 | > th | dose dependent | rect. | 3 | 8 |
| 217 | 83.25 | temperature | 15.0 | 14400 | > th | dose dependent | rect. | 2 | 11 |
| 223 | 83.26 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 232 | 83.27 | temperature | 15.0 | 14400 | > th | dose dependent | sin | 6 | NA |
| 283 | 83.33 | temperature | 15.0 | 14400 | > th | dose dependent | rect. | 22 | 3 |
| 292 | 83.34 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 294 | 83.34 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 5 | 3 |
| 339 | 83.40 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 11 | 19 |
| 360 | 83.43 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 361 | 83.43 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 1 | 5 |
| 370 | 83.43 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 1 | 5 |
| 475 | 83.55 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 1 | 5 |
| 543 | 83.61 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 560 | 83.62 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 22 | 15 |
| 564 | 83.63 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 15 | 21 |
| 588 | 83.64 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 3 | 8 |
| 595 | 83.65 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 13 | 2 |
| 605 | 83.65 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 24 | 13 |
| 692 | 83.69 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 11 | 23 |
| 707 | 83.69 | temperature | 15.0 | 14400 | > th | dose dependent | rect. | 10 | 22 |
| 711 | 83.70 | temperature | 20.0 | 14400 | < th | dose independent | no | NA | NA |
| 719 | 83.70 | temperature | 30.0 | 14400 | < th | dose dependent | sin | 7 | NA |
| 739 | 83.71 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 744 | 83.71 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 16 | 20 |
| 745 | 83.71 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 14 | 21 |
| 750 | 83.71 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 763 | 83.71 | temperature | 15.0 | 14400 | > th | dose dependent | rect. | 12 | 23 |
| 773 | 83.72 | temperature | 15.0 | 14400 | > th | dose dependent | no | NA | NA |
| 814 | 83.74 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 1 | 5 |
| 866 | 83.76 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 2 | 23 |
| 875 | 83.76 | temperature | 15.0 | 14400 | > th | dose dependent | rect. | 2 | 23 |
| 882 | 83.77 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 11 | 23 |
| 902 | 83.78 | temperature | 20.0 | 14400 | > th | dose independent | no | NA | NA |
| 909 | 83.78 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 22 | 1 |
| 973 | 83.81 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 987 | 83.82 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 8 | 18 |