Os07g0431000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
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Os07g0431000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description :
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1043.37 | 1.52 | 5.18 | -2.39 | 0.781 | -2.85 | 1.81 | 1.14 | -1.42 | 6.76 | 70 | 2578 | -- | -- |
| 1044.65 | 1.51 | 5.2 | -2.42 | 0.788 | -2.73 | 1.84 | -- | -1.47 | 6.69 | 69 | 2586 | -- | -- |
| 1051.62 | 1.51 | 5.19 | -2.35 | 0.776 | -2.86 | -- | 0.995 | -1.46 | 6.63 | 69.37 | 2578 | -- | -- |
| 1052.66 | 1.51 | 5.21 | -2.41 | 0.789 | -2.76 | -- | -- | -1.47 | 6.73 | 69 | 2578 | -- | -- |
| 1058.71 | 1.52 | 5.18 | -2.28 | -- | -3.04 | -- | 1.12 | -1.36 | -- | 71.11 | 2207 | -- | -- |
| 1241.35 | 1.65 | 5.07 | -2.91 | 0.909 | -- | 1.72 | -- | -0.911 | 8.32 | -- | -- | -- | -- |
| 1250.49 | 1.66 | 5.07 | -2.86 | 0.905 | -- | -- | -- | -0.911 | 8.42 | -- | -- | -- | -- |
| 1059.13 | 1.52 | 5.2 | -2.36 | -- | -2.99 | -- | -- | -1.35 | -- | 71 | 2219 | -- | -- |
| 1199.75 | 1.61 | 5.16 | -- | 0.647 | -3.22 | -- | -- | -1.22 | 6.62 | 69.11 | 2471 | -- | -- |
| 1296.11 | 1.68 | 5.1 | -2.85 | -- | -- | -- | -- | -0.902 | -- | -- | -- | -- | -- |
| 1465.35 | 1.79 | 5 | -- | 0.894 | -- | -- | -- | -0.593 | 8.65 | -- | -- | -- | -- |
| 1202.56 | 1.62 | 5.16 | -- | -- | -3.35 | -- | -- | -1.17 | -- | 71 | 2215 | -- | -- |
| 1510.44 | 1.81 | 5.03 | -- | -- | -- | -- | -- | -0.585 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 1005.80 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 2 | 1009.04 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 3 | 1012.14 | wind | 9.0 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 4 | 1014.95 | radiation | 30.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 21 | 1023.02 | wind | 9.0 | 43200 | > th | dose independent | rect. | 15 | 2 |
| 22 | 1023.67 | wind | 9.0 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 24 | 1028.37 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 14 | 4 |
| 27 | 1030.82 | wind | 9.0 | 43200 | < th | dose independent | rect. | 15 | 2 |
| 30 | 1038.96 | wind | 7.0 | 43200 | > th | dose independent | rect. | 3 | 11 |
| 34 | 1039.60 | wind | 7.0 | 43200 | < th | dose independent | rect. | 3 | 11 |
| 42 | 1041.32 | wind | 7.0 | 43200 | > th | dose independent | rect. | 21 | 17 |
| 43 | 1041.37 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 11 | 7 |
| 48 | 1042.23 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 7 | 2 |
| 50 | 1042.57 | wind | 7.0 | 43200 | < th | dose independent | rect. | 21 | 17 |
| 52 | 1042.78 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 4 | 5 |
| 55 | 1042.88 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 18 | 15 |
| 80 | 1046.99 | wind | 7.0 | 43200 | > th | dose independent | sin | 6 | NA |
| 82 | 1047.18 | wind | 7.0 | 43200 | < th | dose independent | sin | 6 | NA |
| 97 | 1049.23 | radiation | 30.0 | 1440 | < th | dose independent | rect. | 15 | 22 |
| 98 | 1049.24 | radiation | 10.0 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 105 | 1049.82 | wind | 9.0 | 43200 | > th | dose independent | rect. | 11 | 7 |
| 110 | 1050.01 | radiation | 30.0 | 1440 | < th | dose independent | rect. | 8 | 5 |
| 117 | 1050.51 | radiation | 30.0 | 1440 | < th | dose independent | rect. | 4 | 9 |
| 120 | 1050.55 | radiation | 30.0 | 1440 | < th | dose independent | rect. | 18 | 19 |
| 142 | 1051.17 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 2 | 12 |
| 145 | 1051.36 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 21 | 17 |
| 163 | 1052.41 | wind | 9.0 | 43200 | < th | dose independent | rect. | 11 | 7 |
| 230 | 1055.85 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 16 | 17 |
| 235 | 1056.05 | radiation | 30.0 | 1440 | < th | dose independent | sin | 7 | NA |
| 242 | 1056.38 | wind | 5.0 | 43200 | > th | dose dependent | sin | 5 | NA |
| 249 | 1056.78 | humidity | 70.0 | 1440 | < th | dose dependent | rect. | 12 | 1 |
| 285 | 1058.67 | humidity | 70.0 | 1440 | < th | dose dependent | rect. | 11 | 3 |
| 287 | 1058.79 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 16 | 17 |
| 289 | 1058.95 | radiation | 20.0 | 1440 | < th | dose independent | sin | 11 | NA |
| 303 | 1059.76 | wind | 7.0 | 4320 | > th | dose independent | rect. | 17 | 16 |
| 312 | 1059.96 | wind | 7.0 | 4320 | < th | dose independent | rect. | 17 | 16 |
| 337 | 1060.43 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 22 |
| 339 | 1060.47 | radiation | 30.0 | 4320 | > th | dose dependent | rect. | 16 | 17 |
| 354 | 1061.22 | radiation | 30.0 | 4320 | > th | dose dependent | rect. | 7 | 2 |
| 378 | 1061.71 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 17 | 16 |
| 391 | 1062.13 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 16 | 21 |
| 426 | 1063.09 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 16 | 21 |
| 428 | 1063.15 | wind | 7.0 | 4320 | > th | dose independent | rect. | 17 | 12 |
| 470 | 1064.14 | humidity | 70.0 | 1440 | < th | dose dependent | rect. | 6 | 11 |
| 482 | 1064.17 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 6 | 2 |
| 486 | 1064.21 | humidity | 70.0 | 1440 | < th | dose dependent | rect. | 10 | 7 |
| 490 | 1064.29 | wind | 9.0 | 43200 | < th | dose independent | rect. | 14 | 23 |
| 528 | 1064.63 | radiation | 30.0 | 1440 | < th | dose independent | rect. | 4 | 19 |
| 535 | 1064.67 | radiation | 30.0 | 1440 | < th | dose independent | rect. | 7 | 16 |
| 564 | 1064.75 | radiation | 30.0 | 1440 | < th | dose independent | rect. | 7 | 22 |
| 569 | 1064.77 | wind | 7.0 | 4320 | > th | dose independent | sin | 12 | NA |
| 596 | 1064.82 | radiation | 30.0 | 1440 | < th | dose independent | no | NA | NA |
| 654 | 1065.07 | wind | 7.0 | 4320 | < th | dose independent | sin | 12 | NA |
| 668 | 1065.46 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 6 | 7 |
| 671 | 1065.49 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 6 | 7 |
| 700 | 1065.69 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 3 |
| 731 | 1065.98 | humidity | 70.0 | 1440 | < th | dose dependent | sin | 2 | NA |
| 735 | 1066.03 | wind | 9.0 | 4320 | > th | dose independent | rect. | 17 | 9 |
| 746 | 1066.15 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 21 | 10 |
| 754 | 1066.23 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 16 | 22 |
| 806 | 1066.56 | radiation | 1.0 | 1440 | > th | dose dependent | sin | 11 | NA |
| 810 | 1066.58 | wind | 7.0 | 4320 | > th | dose dependent | sin | 12 | NA |
| 842 | 1066.92 | wind | 9.0 | 4320 | > th | dose independent | rect. | 17 | 6 |
| 937 | 1067.67 | radiation | 1.0 | 1440 | > th | dose dependent | sin | 8 | NA |
| 940 | 1067.68 | radiation | 30.0 | 1440 | > th | dose independent | rect. | 15 | 22 |
| 948 | 1067.71 | wind | 9.0 | 43200 | > th | dose independent | rect. | 14 | 23 |
| 965 | 1067.95 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 23 |