Os07g0429700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0429700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1272.57 | 1.68 | 6.63 | -6.72 | 1.09 | -0.64 | 2 | -17.9 | -2.12 | 8.32 | 19.86 | 4393 | 17 | 1.65 |
| 1480.11 | 1.79 | 5.85 | -0.428 | 1.09 | -1.98 | 2.22 | -- | -0.113 | 8.4 | 25.6 | 47520 | 13.2 | 2.02 |
| 1262.88 | 1.66 | 6.68 | -6.49 | 0.939 | -0.932 | -- | -19.6 | -2.11 | 8.62 | 20.15 | 4482 | 17 | 0.0163 |
| 1495.98 | 1.8 | 5.86 | -0.356 | 1.08 | -1.97 | -- | -- | -0.128 | 8.47 | 25.6 | 47520 | 13.1 | 2.03 |
| 1299.95 | 1.68 | 6.62 | -6.18 | -- | -1.41 | -- | -19 | -1.99 | -- | 19.04 | 4685 | 16.9 | 0.0126 |
| 1555.91 | 1.85 | 6.08 | -2.55 | 1.12 | -- | 2.22 | -- | -1.14 | 8.56 | -- | -- | -- | -- |
| 1571.73 | 1.86 | 6.08 | -2.47 | 1.12 | -- | -- | -- | -1.14 | 8.67 | -- | -- | -- | -- |
| 1431.55 | 1.76 | 6.04 | -2.62 | -- | -2.57 | -- | -- | -1.45 | -- | 29.21 | 956 | 10.7 | 3.85 |
| 1496.44 | 1.8 | 5.83 | -- | 1.08 | -2.14 | -- | -- | -0.0208 | 8.5 | 25.22 | 47520 | 11.8 | 3.26 |
| 1642.06 | 1.89 | 6.11 | -2.47 | -- | -- | -- | -- | -1.13 | -- | -- | -- | -- | -- |
| 1733.11 | 1.95 | 6.02 | -- | 1.11 | -- | -- | -- | -0.862 | 8.84 | -- | -- | -- | -- |
| 1501.23 | 1.8 | 6.09 | -- | -- | -2.78 | -- | -- | -1.11 | -- | 28.96 | 975 | 10.3 | 4.45 |
| 1803.21 | 1.98 | 6.05 | -- | -- | -- | -- | -- | -0.854 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 1235.19 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 2 | 1246.74 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 3 | 1246.88 | wind | 9.0 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 4 | 1249.59 | radiation | 30.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 21 | 1263.55 | wind | 9.0 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 23 | 1264.57 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 14 | 4 |
| 25 | 1266.13 | wind | 7.0 | 43200 | > th | dose independent | rect. | 21 | 17 |
| 26 | 1266.71 | wind | 7.0 | 43200 | > th | dose independent | rect. | 1 | 13 |
| 28 | 1266.86 | wind | 7.0 | 43200 | < th | dose independent | rect. | 3 | 11 |
| 29 | 1266.87 | wind | 7.0 | 43200 | < th | dose independent | rect. | 1 | 13 |
| 32 | 1267.19 | wind | 7.0 | 43200 | < th | dose independent | rect. | 21 | 17 |
| 45 | 1271.65 | wind | 7.0 | 43200 | < th | dose independent | sin | 6 | NA |
| 46 | 1271.87 | wind | 7.0 | 43200 | > th | dose independent | sin | 6 | NA |
| 50 | 1272.79 | wind | 9.0 | 43200 | > th | dose independent | rect. | 15 | 2 |
| 56 | 1275.53 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 2 | 12 |
| 68 | 1277.64 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 21 | 18 |
| 78 | 1278.90 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 94 | 1280.55 | wind | 5.0 | 43200 | > th | dose dependent | sin | 5 | NA |
| 108 | 1282.49 | wind | 9.0 | 43200 | < th | dose independent | rect. | 15 | 2 |
| 112 | 1283.03 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 10 | 4 |
| 140 | 1284.88 | wind | 9.0 | 43200 | > th | dose independent | rect. | 14 | 4 |
| 204 | 1291.33 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 220 | 1292.51 | wind | 7.0 | 43200 | > th | dose independent | rect. | 20 | 10 |
| 223 | 1292.68 | wind | 7.0 | 43200 | < th | dose independent | rect. | 20 | 11 |
| 235 | 1292.99 | wind | 9.0 | 43200 | < th | dose independent | rect. | 14 | 23 |
| 238 | 1293.11 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 4 | 5 |
| 242 | 1293.28 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 19 | 14 |
| 245 | 1293.33 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 7 | 2 |
| 271 | 1294.31 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 20 | 11 |
| 286 | 1295.22 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 11 | 7 |
| 364 | 1298.54 | wind | 9.0 | 43200 | > th | dose independent | rect. | 14 | 23 |
| 383 | 1299.31 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 8 | 13 |
| 458 | 1301.66 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 13 | 8 |
| 461 | 1301.79 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 524 | 1303.46 | temperature | 20.0 | 4320 | > th | dose dependent | sin | 21 | NA |
| 552 | 1304.03 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 17 | 2 |
| 557 | 1304.11 | radiation | 10.0 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 583 | 1304.69 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 593 | 1305.10 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 594 | 1305.10 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 643 | 1306.14 | wind | 9.0 | 43200 | > th | dose independent | rect. | 11 | 7 |
| 646 | 1306.25 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 10 | 1 |
| 677 | 1306.80 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 678 | 1306.80 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 720 | 1307.73 | wind | 9.0 | 43200 | < th | dose independent | rect. | 11 | 7 |
| 751 | 1308.36 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 23 |
| 759 | 1308.48 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 3 |
| 822 | 1309.64 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 7 | 7 |
| 828 | 1309.76 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 896 | 1311.09 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 8 | 14 |
| 967 | 1312.35 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 968 | 1312.35 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 992 | 1312.62 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 13 | 8 |