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Os07g0422000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.5 (0.0237) R2 : 0.132
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.416 (0.05) R2dN8 : 0.17 R2N8 : 0.132
σ : 0.447
deviance : 91.69
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
74.19 0.405 11.5 -0.278 0.271 0.685 -0.0132 2.63 -0.473 3.9 9.841 95 -- --
74.83 0.406 11.6 -0.627 0.339 0.728 -0.554 -- -0.56 3.41 24.2 86 -- --
74.19 0.401 11.5 -0.275 0.271 0.685 -- 2.65 -0.472 3.92 9.809 98 -- --
75.65 0.405 11.6 -0.631 0.366 0.749 -- -- -0.559 3.89 24.2 69 -- --
76.97 0.409 11.5 -0.214 -- 0.395 -- 2.61 -0.427 -- 14.17 109 -- --
83.03 0.427 11.6 -0.511 0.0546 -- -0.825 -- -0.477 3.96 -- -- -- --
84.93 0.432 11.5 -0.5 0.0629 -- -- -- -0.473 6.16 -- -- -- --
79.36 0.417 11.6 -0.563 -- 0.531 -- -- -0.482 -- 26.41 57 -- --
85.52 0.433 11.5 -- 0.276 0.608 -- -- -0.474 3.47 24.3 57 -- --
85.13 0.431 11.5 -0.499 -- -- -- -- -0.471 -- -- -- -- --
91.53 0.448 11.5 -- 0.0561 -- -- -- -0.417 6.62 -- -- -- --
87.5 0.437 11.5 -- -- 0.455 -- -- -0.416 -- 26.62 26 -- --
91.69 0.447 11.5 -- -- -- -- -- -0.416 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 69.35 temperature 15 90 > th dose dependent rect. 7 20
3 69.60 temperature 10 270 > th dose dependent rect. 5 21
27 70.93 temperature 15 10 > th dose dependent rect. 8 19
61 71.57 temperature 10 30 > th dose dependent rect. 23 23
62 71.59 wind 9 14400 > th dose dependent rect. 13 1
100 72.22 atmosphere 1000 10 > th dose independent rect. 11 23
112 72.38 wind 9 14400 > th dose independent rect. 13 1
145 72.77 temperature 25 90 > th dose dependent rect. 18 13
149 72.77 temperature 10 30 > th dose dependent rect. 21 23
161 72.87 temperature 20 10 > th dose dependent rect. 7 13
184 73.04 temperature 25 10 > th dose dependent rect. 18 13
208 73.21 wind 9 14400 < th dose independent rect. 13 1
219 73.27 temperature 25 4320 > th dose independent rect. 24 2
222 73.28 atmosphere 1005 30 > th dose dependent rect. 13 10
225 73.30 wind 9 14400 > th dose dependent rect. 5 9
231 73.33 temperature 20 30 > th dose dependent rect. 23 21
232 73.34 temperature 30 270 < th dose independent rect. 10 9
235 73.35 atmosphere 1000 30 > th dose independent rect. 9 23
239 73.37 atmosphere 1000 90 > th dose independent rect. 24 23
242 73.38 wind 9 14400 > th dose dependent rect. 9 5
250 73.42 temperature 25 4320 < th dose independent rect. 1 1
257 73.44 temperature 30 90 < th dose dependent rect. 1 22
259 73.46 temperature 30 270 < th dose independent rect. 1 18
262 73.48 wind 9 14400 > th dose independent rect. 15 1
266 73.50 temperature 30 270 < th dose independent rect. 10 21
267 73.50 atmosphere 1000 30 > th dose independent rect. 11 21
276 73.54 temperature 30 720 < th dose independent rect. 7 8
277 73.55 temperature 25 4320 > th dose dependent rect. 5 2
280 73.57 temperature 30 720 < th dose independent rect. 11 1
292 73.63 temperature 15 90 > th dose dependent rect. 15 23
294 73.64 temperature 25 4320 > th dose dependent rect. 24 1
295 73.64 temperature 25 4320 > th dose dependent rect. 3 4
298 73.66 temperature 25 4320 < th dose independent rect. 3 1
310 73.72 temperature 25 4320 < th dose independent rect. 5 1
317 73.75 temperature 25 270 > th dose dependent sin 10 NA
334 73.80 atmosphere 1000 30 > th dose independent rect. 19 23
354 73.82 temperature 25 4320 > th dose independent rect. 2 5
361 73.83 temperature 30 720 > th dose independent rect. 8 6
375 73.83 atmosphere 1000 10 < th dose independent rect. 6 22
381 73.84 temperature 30 270 < th dose independent rect. 11 19
413 73.91 temperature 25 4320 < th dose independent rect. 1 6
415 73.91 humidity 80 14400 < th dose dependent rect. 4 1
429 73.94 temperature 10 270 > th dose dependent rect. 6 11
437 73.96 temperature 30 720 < th dose independent sin 7 NA
455 73.98 atmosphere 1000 30 > th dose independent rect. 13 23
456 73.98 wind 9 14400 > th dose dependent rect. 15 1
459 74.00 temperature 25 4320 < th dose independent rect. 3 4
460 74.00 temperature 10 720 > th dose dependent rect. 5 6
478 74.06 temperature 25 4320 > th dose independent rect. 5 2
488 74.08 temperature 25 4320 < th dose independent rect. 24 4
489 74.08 humidity 70 90 > th dose independent rect. 13 18
491 74.08 temperature 25 30 > th dose dependent rect. 19 23
492 74.09 wind 1 14400 < th dose dependent rect. 2 1
496 74.10 atmosphere 1000 30 > th dose independent rect. 11 12
499 74.12 wind 1 14400 < th dose independent rect. 2 1
511 74.14 temperature 30 90 < th dose dependent rect. 3 20
513 74.15 temperature 30 720 > th dose independent sin 7 NA
514 74.15 temperature 30 270 < th dose independent rect. 24 21
537 74.18 temperature 30 14400 > th dose dependent rect. 8 1
557 74.19 temperature 25 10 > th dose dependent rect. 15 23
562 74.20 temperature 10 90 > th dose dependent no NA NA
567 74.22 atmosphere 1000 30 > th dose independent rect. 17 23
582 74.24 atmosphere 1000 10 < th dose independent rect. 9 23
583 74.24 atmosphere 1000 10 < th dose independent rect. 17 23
584 74.24 atmosphere 1000 10 < th dose independent rect. 23 23
589 74.25 wind 9 14400 < th dose independent rect. 15 1
594 74.26 atmosphere 1000 10 > th dose independent no NA NA
596 74.26 atmosphere 1000 10 < th dose independent no NA NA
597 74.26 wind 1 14400 < th dose independent rect. 9 3
601 74.26 atmosphere 1000 10 < th dose independent rect. 19 23
605 74.27 wind 1 14400 > th dose independent rect. 2 1
610 74.27 atmosphere 1000 10 < th dose independent rect. 21 23
618 74.28 atmosphere 1000 10 < th dose independent rect. 1 23
629 74.29 temperature 30 720 < th dose independent rect. 23 16
631 74.29 atmosphere 1000 10 > th dose independent rect. 7 23
635 74.29 temperature 20 720 > th dose dependent rect. 6 3
644 74.30 atmosphere 1000 10 < th dose independent rect. 15 23
663 74.32 atmosphere 1000 30 < th dose independent rect. 11 23
672 74.33 atmosphere 1000 10 > th dose independent rect. 1 23
674 74.33 atmosphere 1000 30 < th dose independent rect. 13 23
689 74.35 atmosphere 1000 30 > th dose independent rect. 21 23
711 74.39 wind 9 14400 > th dose independent rect. 5 9
718 74.40 temperature 25 10 > th dose dependent no NA NA
723 74.41 temperature 30 14400 > th dose independent rect. 8 1
739 74.41 temperature 25 10 > th dose dependent rect. 3 23
770 74.47 atmosphere 1005 10 < th dose dependent rect. 6 22
772 74.48 temperature 30 720 < th dose independent sin 5 NA
783 74.49 atmosphere 1000 90 > th dose independent rect. 3 20
839 74.53 temperature 30 14400 < th dose independent rect. 19 14
840 74.53 atmosphere 1000 10 > th dose independent rect. 5 18
844 74.54 temperature 30 720 < th dose independent rect. 9 6
856 74.55 humidity 80 14400 < th dose dependent rect. 1 1
867 74.56 temperature 20 90 > th dose dependent sin 1 NA
869 74.56 humidity 80 14400 < th dose dependent rect. 1 4
875 74.57 temperature 30 14400 < th dose independent rect. 21 12
912 74.60 radiation 10 90 < th dose independent rect. 24 23
923 74.62 temperature 30 14400 < th dose independent rect. 23 10
926 74.62 temperature 20 10 > th dose dependent sin 0 NA
931 74.62 atmosphere 1005 10 < th dose dependent rect. 17 23
996 74.67 atmosphere 1005 10 < th dose dependent rect. 9 23
997 74.67 atmosphere 1005 10 < th dose dependent rect. 19 23
999 74.68 temperature 30 720 < th dose independent rect. 21 17